BGIOSGA017310

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Revision as of 04:43, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017310| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017310, complete gene.| tag = OsI_178...")
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Gene Name

BGIOSGA017310

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017310, complete gene.

LocusTag

OsI_17819

Ensembl Transcript ID

BGIOSGA017310-TA

Ensembl Protein ID

BGIOSGA017310-PA

Length

3285

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:33055824..33059108

Sequence Coding Region

33055824..33056410,33057766..33057871,33057982..33058150,33058240..33058427,33058989..33059108

Genome Context

<gbrowseImage1> name=IndicaChromosome04:33055824..33059108 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:33055824..33059108 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGTCCGACCAGGAGATCGCCAGCTGCGTCGAGTCCGTCCTCCGCTCGTCGGGGGGCGCCGCCGGGGAGGCCTCGCTCGCCGCCGTGCTGTCGCAGGCGGAGGCCAAGCTCGGCGTCGACCTCGCACACAAGGCGACCTTCATCCGCGACCAGATGGACCTCTTCTTCGGCCCGCGCCTCCAGCCGCCGCTCGTCGCCAAGGCCCAGGCGGCGGCGGCGGCGGCTCCTAATCCTCCTCCTCTGTCGCCGCTCCCGCGCCTGCCATGCCGCAGGTGCAGGTGCAGGCGCAGTTGCAGCAGATGCAGCAGCAGCTCGCGGTGCTCCAGCCCCAGCTCATATTCCAGTCCATGCCGCAGCTCCCCGCTTGTGTACCAGGCGGCGCCGCTGGGGCGGTCTCCCCGCAGCCTCCCGTGCCGGCCATGGCGTTCTACCCGCCGCCTCCTCTGGCCTTCCGCGTCACCAGCGGCTTGGCTGGGGTCGCCACTGGTGGGACCGTCTCCTTCCAGCAGCCAGCCCGTGGAACCGGCGGCACTGCTTCCCCCACCGTCCGCAGTACAGGTCCGCGGGCGACAATCAAGGAACAGTGCTTCAAAGCGGAAACGAGGTGGGCCTGGTGGTTTAAATAAAGTTTGTGCAATCTCACCTGAACTTCAGACTATTGTTGGTGAGACTGTCATGTCAAGAACTCAGATTGTCAAGCAGCTTTGGCAATATATTCGGCAGAATAATCTTCAAGATCCTGATGACAAAAGGAAGATAATCTGCAATGATGAACTTCGTGTGGTTTTTGGAACTGACACAACTGACATGTTTAAGATGAATAAATTGTTGGCGAAACATATAACTCCACTTGACCCAAAGGATCAAATTCGGGAAGCAAAGAAATTTAAGCCCTCCAATGTAGCTACTCAGCCTATGCCTCTGATTAATCAACCCTCTGTGGTGATTTCTGATGCACTAGCCAAGTTTATTGGAATGGAAGGCACAGTGCCTCAAGATGATGCTTTGAGGTACCTTTGGGATTACATAAAAGCAAACCAACTTGAGGATGCTATTACTGGATCAATATTATGTGACTCAAAACTTCAGGAGCTGTTCGGCTGCGAGAGCATTCCTAGTTCTGGATTATCAGAGTTGCTTGCTCACCACTTCATTAAGGAAACATAG</cdnaseq>

Protein Sequence

<aaseq>MVSDQEIASCVESVLRSSGGAAGEASLAAVLSQAEAKLGVDLAHKATFIRDQMDLFFGPRLQPPLVAKAQAAAAAAPNPPPLSPLPRLPCRRCRCRRSCSRCSSSSRCSSPSSYSSPCRSSPLVYQAAPLGRSPRSLPCRPWRSTRRLLWPSASPAAWLGSPLVGPSPSSSQPVEPAALLPPPSAVQVRGRQSRNSASKRKRGGPGGLNKVCAISPELQTIVGETVMSRTQIVKQLWQYIRQNNLQDPDDKRKIICNDELRVVFGTDTTDMFKMNKLLAKHITPLDPKDQIREAKKFKPSNVATQPMPLINQPSVVISDALAKFIGMEGTVPQDDALRYLWDYIKANQLEDAITGSILCDSKLQELFGCESIPSSGLSELLAHHFIKET</aaseq>

Gene Sequence

<dnaseqindica>1..587#1943..2048#2159..2327#2417..2604#3166..3285#ATGGTGTCCGACCAGGAGATCGCCAGCTGCGTCGAGTCCGTCCTCCGCTCGTCGGGGGGCGCCGCCGGGGAGGCCTCGCTCGCCGCCGTGCTGTCGCAGGCGGAGGCCAAGCTCGGCGTCGACCTCGCACACAAGGCGACCTTCATCCGCGACCAGATGGACCTCTTCTTCGGCCCGCGCCTCCAGCCGCCGCTCGTCGCCAAGGCCCAGGCGGCGGCGGCGGCGGCTCCTAATCCTCCTCCTCTGTCGCCGCTCCCGCGCCTGCCATGCCGCAGGTGCAGGTGCAGGCGCAGTTGCAGCAGATGCAGCAGCAGCTCGCGGTGCTCCAGCCCCAGCTCATATTCCAGTCCATGCCGCAGCTCCCCGCTTGTGTACCAGGCGGCGCCGCTGGGGCGGTCTCCCCGCAGCCTCCCGTGCCGGCCATGGCGTTCTACCCGCCGCCTCCTCTGGCCTTCCGCGTCACCAGCGGCTTGGCTGGGGTCGCCACTGGTGGGACCGTCTCCTTCCAGCAGCCAGCCCGTGGAACCGGCGGCACTGCTTCCCCCACCGTCCGCAGTACAGGTCCGCGGGCGACAATCAAGGAACAGGTGAGCGACCGNGATGAAATTAGGGATTCAGTTCCCGCCAATCGAGATCGGAGATACTATAGTGGGCATCGAATATCTTCGCGACTTCGCTTCTGTAAGATCTCAGCTTCTGGTCTGGACTAAGTTAGCTTGCGTTGTATTCGATTTAATGTAAGGGCATGCTGAATACATAACTGACGTTTGAACTTGAGATTACCTGTTTGCACTCGTGAATTGGCACCTCTAGCTGAGTGGGGTTAGGGTTTAGGGTTCAGTCTCCTAGCAAAGTGATTTTGGTTCCAACTCGTGTACACCAATTTATATACACTATAGCTTTTAGGACACATGCTTGGGATGCCGGTATGGTGGTATCTACTTTTTGACCATATACTATGTTGGTTGTGTAACCATCCATTTGTAGTTATGTTAGTTAGTTTCTATCTCATTTAGTTAACTGGTCGAATATAGTGGAATTTAGGCATGTTTTGTTTGACTGGTGTATTCTGTGTTGAGCTTCAGAAGGTTATAATTAAAAAAAAGCACAATAGTCCGTTTTATATGTATTTTGTTTGATTGTGGTACCAAGTGCTTGAAGGATATTACAGCTGTTATCCTAGAATGTACAAAATGCTAAATTGGGCTTGCTTTATTTCTTAAGTAGTGAATCTGATAGTTTGGACTTGTGGAATCGTCAGCTTTCTTGCAAGCCACTAAATAGAACTTCCTGCTTTTCCCCCCTGTCTGGATACTGTTTTCTGCCCAGACTGCTCAGCGTGAACTTTTCTCTTTTTTCAAACAATGACATTTTGATCCTGCAAACAAAAGGTACAGTCAATTAATTTTGGTTTGTCCTTTGGTAGTATGTTGAAAAGCTTTCTTTTTCTTGTATGTGTATGAATCATAGTATTTGTAATAAAAAAAACATGATCGTTAACATTAGATTCATTGGATCTGTATGCTACATCTATTTTTCATGATGGGATTCTGTACACTGTATAGCTTGTACTGTTGACCTGTTGTAGTGTATTTCCCCTATGAACCAAAGAAATATGTTCCCACTTATTGTATACCAAAACAGAGCTCAATGTTATATGGGTTATAGTTCTTAGTTTTTGCACATTTTCTTATTCACAATCAGTTAAGATTTCTTAGGCCATATAAGTATTATCGCATGATATTATTCTCACTGGATAATATGCAAATGTCACGCTGAATCTATTTTGAAGCTGATATAAAGGTTATTTTGTTCTGCTTGAAGATATACTGGTTTAACCATTAGATTCATGTGTCCTTGGATTGTACATTGATTCAAACCTGTGGAATTTACTCATGCATGCAAACTGATTGGTTTATCATATCTGTATTATTTCCTCTAGTGCTTCAAAGCGGAAACGAGGTGGGCCTGGTGGTTTAAATAAAGTTTGTGCAATCTCACCTGAACTTCAGACTATTGTTGGTGAGACTGTCATGTCAAGAACTCAGGTAATCTCAGCTTTCCCCAATTGTATTAGAGAAAATGGCATCCAATTTAATCCTGTGATAAACTCTTTAATGAATCAACCGAGACAAAGTAACTTGCTTCCTCCATTCAGATTGTCAAGCAGCTTTGGCAATATATTCGGCAGAATAATCTTCAAGATCCTGATGACAAAAGGAAGATAATCTGCAATGATGAACTTCGTGTGGTTTTTGGAACTGACACAACTGACATGTTTAAGATGAATAAATTGTTGGCGAAACATATAACTCCACTTGACCCAAGTACGTTCTTCTGCTTCTTTTGGTCTAGATGTCGCTGCTAATGTTTTGTTCTGATGGAAGTTCCTAATTATGTTTTCTTGGTTCTGCAGAGGATCAAATTCGGGAAGCAAAGAAATTTAAGCCCTCCAATGTAGCTACTCAGCCTATGCCTCTGATTAATCAACCCTCTGTGGTGATTTCTGATGCACTAGCCAAGTTTATTGGAATGGAAGGCACAGTGCCTCAAGATGATGCTTTGAGGTACCTTTGGGATTACATAAAAGCAAACCAACTTGAGGTATGAATATGTTTTAACTTTATATTTATTGTTGCACGATATCGATTTGCTCTTTGCTTCTGATGGATGCAAGTTGGAGCTAAGTATTGGCTGCAAACGCTGGAAAACTTTCAATGTTTTGAAACATCATTGTATTATATATAGTTATAATTGTCCATAAGCAATAGTAGTATTATGGCAGAGACTGAAGAATAATCTGCTGGCTTGTAATTCACCACATTCCTGTTAATGTTAGAGACAACTGAAATAGTGTATTTTGTGTCAAGTTAAAGTGCTAACGTTTTATTACTACGTCTGTCTTTTGGGGGGGGGGGGGGGGGGGGAAGCTGACTGCTTACAGAGCTTATCTGATATGTAACACGGTTACTGGATATCTGTTACGCACTACCAGTGTAATTCTTGTTTTATTCTTTTATCCTAGATTACTAGATTAACCTGCCAAGTATCTTAGCAAAGTTGTGTTCTTTCTGTCTCCCTTGTAATCGTTCCAATCTTGAGAATGTGATCCTTAAAGTTGGCCAACTGATATGTGCTTTTTATTCATTTACTGATTTTACACAGGATGCTATTACTGGATCAATATTATGTGACTCAAAACTTCAGGAGCTGTTCGGCTGCGAGAGCATTCCTAGTTCTGGATTATCAGAGTTGCTTGCTCACCACTTCATTAAGGAAACATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017310