BGIOSGA017323

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Revision as of 04:43, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017323| Description = cDNA clone:J033094P21, full insert sequence| Definition = Oryza sativa Indica Group BGIOSGA017323, complete gene.| ta...")
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Gene Name

BGIOSGA017323

Description

cDNA clone:J033094P21, full insert sequence

Definition

Oryza sativa Indica Group BGIOSGA017323, complete gene.

LocusTag

B0811B10.9

Ensembl Transcript ID

BGIOSGA017323-TA

Ensembl Protein ID

BGIOSGA017323-PA

Length

3375

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:33191614..33194988

Sequence Coding Region

33191614..33191699,33191790..33191854,33191943..33192150,33192884..33192976,33193367..33193454
,33193853..33193938,33194469..33194988

Genome Context

<gbrowseImage1> name=IndicaChromosome04:33191614..33194988 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:33191614..33194988 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCGAGTCGCCGCCTGCTCCATCTGCGGCCGGAGCTAGGGCTGCGCCTGCGCTCCCGTGCCCTAATCCCCTACCCTTCCTGGACGAAGGCGATGGGTCGTTGCCGGTATGAGCCGTCACCGCGGAGGCTCTCGAGCTGCCGGCGAGCAGCCAAGAATGAGCGGCCATGGAGGTCGAGTTCAAATGAGCAGCTGACTGATGGCGATGGCACAGCCAAGTACATGGGCAGGAATTTCCCCGATGAATTCGCACAGCTTTCTTTGGAAGAGGAGGAAAGCGACGATGAGGTGCACGGAATCAGCGAAACCATGGTGAAAGATGTGGAGAAGGCTGCGGTCGAGTTGCTTGCTGGCAGAGCATTCACAGTTTCAGATCTTAGGAAGAAACTACGTGCTAAGAAGTTTCCTGATAATGCAGTTGATTCTGTAATTGCTGATTTCAAGTCAAGGGGTCTGTTGAATGATGGTTATTATGCGGAATCTTTTTCACGATCTCGATGGTTATCATCAACTTGGGGCCCAAAGCGTATAAAACAGGCACTTCGCCAAAAAGGGGTGCAAGATGCAGAAGTAGACCAGGCGACAAGGAGAGTATTCCAAGATGGTCATTCAAACCAGACAATGGATGAAGAATCATTTACTTGGGCTTTATTCTTACTCGTTCAGGCGTCAGCGGCGCTCGGAGACGGGCTGGATGCGCTCCTGGCCTCCTCTGCCGGATCGGGGGCTGCCGCTGGTCTGGCCGGGCTCTCAGCCGGCGCCTCGGAGGATGACACGGATATCGCAGAGGTGCCGATGGAGGGAACCGGATCCTCGCTACGTCAGAGGGACGTCGGGCGCAGCTGCGCCGTTCGTTCCGCATCCGACGGACAGGCTCGCCCACGGCCCCCCAAAAAAAAAATACGGTCCACATCGCCACCACGGAGCCGCAGCCGGCCGTGCCGCCGGGGACGACTGGACGAGACAAGTGGGAGACCTCTGCCGCCGCCGCCACACGGCCGCATCCCCCGTCTCCCCGACGAAGCCCCTTCTGTCGCCACCTTCCTCCTCGTCCCCAACGCCGCCTCCGTGTCCTCCGTCATGCGGGAGGCCTCCGCTGCTCTCCGGCGTAAATTGAGACGCAACAGGAATGAAGCAATTTGA</cdnaseq>

Protein Sequence

<aaseq>MAASRRLLHLRPELGLRLRSRALIPYPSWTKAMGRCRYEPSPRRLSSCRRAAKNERPWRSSSNEQLTDGDGTAKYMGRNFPDEFAQLSLEEEESDDEVHGISETMVKDVEKAAVELLAGRAFTVSDLRKKLRAKKFPDNAVDSVIADFKSRGLLNDGYYAESFSRSRWLSSTWGPKRIKQALRQKGVQDAEVDQATRRVFQDGHSNQTMDEESFTWALFLLVQASAALGDGLDALLASSAGSGAAAGLAGLSAGASEDDTDIAEVPMEGTGSSLRQRDVGRSCAVRSASDGQARPRPPKKKIRSTSPPRSRSRPCRRGRLDETSGRPLPPPPHGRIPRLPDEAPSVATFLLVPNAASVSSVMREASAALRRKLRRNRNEAI</aaseq>

Gene Sequence

<dnaseqindica>1..86#177..241#330..537#1271..1363#1754..1841#2240..2325#2856..3375#ATGGCCGCGAGTCGCCGCCTGCTCCATCTGCGGCCGGAGCTAGGGCTGCGCCTGCGCTCCCGTGCCCTAATCCCCTACCCTTCCTGGTACCTCTCCAGTCTCCACCCGCTCCCTCGATCCCCTTTTCGATCTCTCAGCTGTCCTAATTCGCTCTCCTCAAAATGCCTCTTCTTCAGGACGAAGGCGATGGGTCGTTGCCGGTATGAGCCGTCACCGCGGAGGCTCTCGAGCTGCCGGCGAGGTGCGTACGGAGAGGGGAACGCGGGTGAGCGTTTCAGTTATTGTTCAATGTAGATGTGCAACTGAACTGCTTGTTGTTCCTTTTCCAGCAGCCAAGAATGAGCGGCCATGGAGGTCGAGTTCAAATGAGCAGCTGACTGATGGCGATGGCACAGCCAAGTACATGGGCAGGAATTTCCCCGATGAATTCGCACAGCTTTCTTTGGAAGAGGAGGAAAGCGACGATGAGGTGCACGGAATCAGCGAAACCATGGTGAAAGATGTGGAGAAGGCTGCGGTCGAGTTGCTTGCTGGCAGGTAAGAATTAGCAAGCGATTTTCAACTCAACATCCATCCAGAAATATTGGAGGAATATCACTGAAGCACTGCTAAAGCGCTAATTATAACCAACATTTTCTCTGAGTGTTACTGGCCCTTCTCGTTTGGTGGTATTGGTTGTTGTTCTAATATAAGTGGTTGTTTTCTAGTTGGTGTATTCCCATGAACTTGATTCTGTAGGTGTCATGTCGCCACGAACAATGTGAAGATCTTCCTTGCCACTGTAAAAAAAGTACTTGAAGAAAAGAATCACGCCTTTCTGTTGTGCAAAAATGCAAGCCTTTATTTCAGGCAAGCATGGTTTATGCACAATGGTAAGGAAGCCAAAGAACTAGAACATAACATATGCAGCTAGCTGATTTGCTCATTTCTGCTATCATGGTCTTGTCTTGTTTTAAGTAGCTTACATAGTCCAAAGGAAATTTCTGCGCTATAAATTCTGCTCACTTATCACAGAAGTATATCTTTAGTGTGTTGTTTACCACTGTTGAAATTGAAATCTGAAATGCACATCCTTGTTTATTTTGAGCAGAGCATTCACAGTTCATTTCTGCTATCATGGTCTTGTCTTGTTTTAAGTAGCTTACATAGTCCAAAGGAAATTTCTGCGCTATAAATTCTGCCCACTTATCACATAAGTATATCTTTAGTGTGTTGTTTACCACTGTTGAAATTGAAATCTGAAATGCACCTCCTTGTTTATCTTGAGCAGAGCATTCACAGTTTCAGATCTTAGGAAGAAACTACGTGCTAAGAAGTTTCCTGATAATGCAGTTGATTCTGTAATTGCTGATTTCAAGTCAAGGTAAACACCTTTCTGTTGAATTGTTGAGCGCACTGACCGATAAACTGTAAAGGAACTTAGTACGCCACATTGCCATCCCAGTTGAATCAACTAGCATAGATACACAAAATTCTTCATACTCACCAATGGTGGTGATCATCTGTCTTTAGAACTTGTCTATATTATATGGAAGTTCCTACAACTTGACTCACCCAGTTTTCTAGATACTCTTGAATGTGGAATCCACAAAAAAAATGGCCTTCATAATTTGAAGGTATAATATTTGGTATTAGATTAAGTCATACTTGTGGATGCCATACACTAGCATATTCACTCTGACAATTTATGTTTTATGTGCCTAGCTTCTTCTCTTTCTTAGTTACAATAAATTTGTTCTTTTTGTTCCTGAAGGGGTCTGTTGAATGATGGTTATTATGCGGAATCTTTTTCACGATCTCGATGGTTATCATCAACTTGGGGCCCAAAGCGTATAAAACAGGTTGGTGGTATCTTTTCCTCTCTTTCTGCACTCAGTTGTTCCAATGAAACATCTTGCACAGCCTTCCCTCTTATATTCACTGAAGTCCTTTGTTATCAGTTAACACATGAATATAAACTCACTATAGATTGCAATGGGTTTAGCATAATTTCCGTGTCCAAAAGTTCAAATTCAATGAAGGAAGAGTAGCTTTGTGAAGCAACATTACATTCTGATGCCTTTAGAAACAAATGTCTTTATCTTTCTAGCAGTTGGTCAAGACATAAGTCCACATTGACATTCTAGTTATGTGGTATATTTCGTGTAGATGACTTAACTAATATGAATAATTCATTATATATGTCATGTCTAATTTTAACTGTAACTGACTGAAAAACATGTATTTTTGTCTGAATTAGGCACTTCGCCAAAAAGGGGTGCAAGATGCAGAAGTAGACCAGGCGACAAGGAGAGTATTCCAAGATGGTCATTCAAACCAGACAATGTATGGCATTTCCGAGGATTCAATGGATCATCTCTTTGAGTAGGCAGCTAAACAGTGGCAGCGGGGGCAAAGCTTGCCCCTTGAGAATCGCCGTGCACGCGTAGTGAGGTGGCTTCAGTACCGAGGGTTCAACTGGGCTGTAACCAATGCCATTGTTAGGAAGCTGGAAGCACAGAAACCTCCCTGAGTATGGAATTGATCCTTCTCCTTTGCTGCTTTTCAACTTTGCAATTTACAATGGTTTGCTATTTCTGTCGCAAGTTTAGCTTGCAGGTTCCTTCTATAGTTATGAATCTGGTTTCTGATTAACATGCCATTTTGAACAACGGGGAACGATGATTAACATGGTCATCATCCAACTTACATTAACTCATCCAATTGCATGATTAACATGGTCAATCAACGCATAGGAAGCAAAAAAACAAAAAGAAAACAATGAAAAATGAAAAATAAAAAAAATAAAAAAATGAGGTTCTTTTAGCCCTAATAATGGATGGGTGGCATGTATATATGTTTGATCGATGTTCTAGGGATGAAGAATCATTTACTTGGGCTTTATTCTTACTCGTTCAGGCGTCAGCGGCGCTCGGAGACGGGCTGGATGCGCTCCTGGCCTCCTCTGCCGGATCGGGGGCTGCCGCTGGTCTGGCCGGGCTCTCAGCCGGCGCCTCGGAGGATGACACGGATATCGCAGAGGTGCCGATGGAGGGAACCGGATCCTCGCTACGTCAGAGGGACGTCGGGCGCAGCTGCGCCGTTCGTTCCGCATCCGACGGACAGGCTCGCCCACGGCCCCCCAAAAAAAAAATACGGTCCACATCGCCACCACGGAGCCGCAGCCGGCCGTGCCGCCGGGGACGACTGGACGAGACAAGTGGGAGACCTCTGCCGCCGCCGCCACACGGCCGCATCCCCCGTCTCCCCGACGAAGCCCCTTCTGTCGCCACCTTCCTCCTCGTCCCCAACGCCGCCTCCGTGTCCTCCGTCATGCGGGAGGCCTCCGCTGCTCTCCGGCGTAAATTGAGACGCAACAGGAATGAAGCAATTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017323