BGIOSGA017322

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Revision as of 04:43, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017322| Description = cDNA clone:J023083O16, full insert sequence| Definition = Oryza sativa Indica Group BGIOSGA017322, complete gene.| ta...")
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Gene Name

BGIOSGA017322

Description

cDNA clone:J023083O16, full insert sequence

Definition

Oryza sativa Indica Group BGIOSGA017322, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA017322-TA

Ensembl Protein ID

BGIOSGA017322-PA

Length

3642

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:33183406..33187047

Sequence Coding Region

33183406..33183761,33183862..33183947,33184256..33184326,33184486..33184553,33184721..33184782
,33185039..33185136,33185574..33185655,33185964..33186106,33186262..33186410
,33186490..33186623,33186743..33186861,33186955..33187047

Genome Context

<gbrowseImage1> name=IndicaChromosome04:33183406..33187047 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:33183406..33187047 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGATGGCGGTGCTGCTCCGCAAGGTGTGGGGCTCCGTGCTGGCCCGCGCGGCGGCGGGGGCGGCGCCGCCGGAGGCCTTCGCCGCCGCCGCCTCCCCGCGCCGCCCGCAGGCCGCCGGGGAGTACGGCTCGCTGGGCGCGCTCGACGTTCTCCCGATCGACGTGCTCGCGCAGATCCTGCGCCTGCTCGGCCCCGCCGACGCCGCGCGGTCCACCGCCGTGTGCCGCGCCTGGCGCCTGCTCGCCTCCGACAATGGCCTGTGGGCCTTCTTCCTCCGCCTCGGCCCCGATCCGTGGGAGCTCGTCGTCTTCGCCGAGACCCACCTCGGCGCTGGCCCGGCCTTGCACCCCGGGCTGTACTACGATAGCTCGCCGCAGCTTTCGTTCAAGCATGTTTACACCCGTCGAGCGGTGGTTCCTGGTTCGATTATAGTCGATGGTGGATCGGGATATTGTAAGTACGGATGGAGCAAGTATGCTGCTCCATCTGGGCGTTGTGCGACATTCTTGGAATTTGGCAACATCGAGTCACCTATGTATGCAAGGCTTCGTCACTTCTTGTCCACAATCTACACCAGGATGCAAGTAAAGCCTTCTACTCAACCAATTATTGTTGTTCTTCCACTCTGCCACTCGGATGATACCGAGTCTGCTAGGGCTTCAAGAAAGCAATACAGGGACACATTATACTCGGTTCTGTTCGATATGAATGTTCCTGCTGTTTGTTCTGTTGATCAGGCAGTTCTAGCTTTATATGCTGCTAAACGAACTTCTGGTATTGTTGTCAACATTGGATTTAATGCCACATCTATTGTTCCTATATTTCAAGGTAGGGTAATGCATGAGATAGGTGTTGAAACTGTGGGGCAAGGTGCCCTCAAACTTACTGGATTTCTGAAGGAACTAATGCAGCAGAGAAATATAACATTTGAGTCACTGTACACTGTTCGAACCATCAAAGAGAAACTTTGTTACGTCGCGGCTGATTATGAAGCAGAAAAACGTAAAGATACACAAGCTTCCTGTGAAGTAGATGGTGAAGGATGGTTTACTCTGTCTGAAGAAAGGTTCAAGACTGCAGAAATCCTTTTCCAGCCCCAGATTGGAGGAGTGCGTGCTATGGGCTTGCATAAAGCAGTATCTCTGTGTATGGATCACTGCTACAATTCAGAAGTGTTCGGTGATGACAACTGGTACAAGACAGTAGTTTTATCCGGTGGATCTTCATGCTTACCTGGTTTATCAGAGAGACTGGAAAAGGAGCTCCGTGAACTTCTTCCAGCACATATTTCAGAAGGGATAAGGGTTATTCCTCCCCCATTTGGCACCGATTCTGCCTGGTTTGGTGCAAAAATGATTAGCAACGTGAGCACTTTCACGGAGGCATGGTGCATCAAGAAGAAGCAGTTTCGCCAGAAGACTCGTCGCAATGGTCCATCTTTTGTGAATGTGTGGTAA</cdnaseq>

Protein Sequence

<aaseq>MAMAVLLRKVWGSVLARAAAGAAPPEAFAAAASPRRPQAAGEYGSLGALDVLPIDVLAQILRLLGPADAARSTAVCRAWRLLASDNGLWAFFLRLGPDPWELVVFAETHLGAGPALHPGLYYDSSPQLSFKHVYTRRAVVPGSIIVDGGSGYCKYGWSKYAAPSGRCATFLEFGNIESPMYARLRHFLSTIYTRMQVKPSTQPIIVVLPLCHSDDTESARASRKQYRDTLYSVLFDMNVPAVCSVDQAVLALYAAKRTSGIVVNIGFNATSIVPIFQGRVMHEIGVETVGQGALKLTGFLKELMQQRNITFESLYTVRTIKEKLCYVAADYEAEKRKDTQASCEVDGEGWFTLSEERFKTAEILFQPQIGGVRAMGLHKAVSLCMDHCYNSEVFGDDNWYKTVVLSGGSSCLPGLSERLEKELRELLPAHISEGIRVIPPPFGTDSAWFGAKMISNVSTFTEAWCIKKKQFRQKTRRNGPSFVNVW</aaseq>

Gene Sequence

<dnaseqindica>1..356#457..542#851..921#1081..1148#1316..1377#1634..1731#2169..2250#2559..2701#2857..3005#3085..3218#3338..3456#3550..3642#ATGGCGATGGCGGTGCTGCTCCGCAAGGTGTGGGGCTCCGTGCTGGCCCGCGCGGCGGCGGGGGCGGCGCCGCCGGAGGCCTTCGCCGCCGCCGCCTCCCCGCGCCGCCCGCAGGCCGCCGGGGAGTACGGCTCGCTGGGCGCGCTCGACGTTCTCCCGATCGACGTGCTCGCGCAGATCCTGCGCCTGCTCGGCCCCGCCGACGCCGCGCGGTCCACCGCCGTGTGCCGCGCCTGGCGCCTGCTCGCCTCCGACAATGGCCTGTGGGCCTTCTTCCTCCGCCTCGGCCCCGATCCGTGGGAGCTCGTCGTCTTCGCCGAGACCCACCTCGGCGCTGGCCCGGCCTTGCACCCCGGGTCCGTACTCCGTACCGCGGCGCCTCTCCCGCTGTCTCGCATACTCCAGTTGTTAGGACTTATAGTATCTTTACCTAACACCATCGTTGTGCGCTTGTAGGCTGTACTACGATAGCTCGCCGCAGCTTTCGTTCAAGCATGTTTACACCCGTCGAGCGGTGGTTCCTGGTTCGATTATAGTCGATGGTATGATCCTCTTCGACATTCATATTGTGAATCTTTGTGTATGCTTTAAAATAACCATTAACCGATGCTTTGGTTAATAATAGTAGACACTGGATAGTAGAGTGACCGAGTACAGTGCACATTGATTGCTTCGTCTGAGTTTTCAATTGCAAAAGTTCGGTATTTATACATTACAACAGCTGTGTGGTTTGTGGAGTATATCGGTATTAGATTTGCTCAATCATGTTTAGTTGGTTGCAACAGAAGGGGGCTGTGTATTAGTTCTTCCCCTTTGAACTCATGTATCCTCTGGTGTTTTTCTTATTAAGGTGGATCGGGATATTGTAAGTACGGATGGAGCAAGTATGCTGCTCCATCTGGGCGTTGTGCGACATTCTTGGTAAGCTATCAAGACCCGCTACCACATCTTAATGACATATTCCCAACTATTTTGTACCATCATGATGACCAAGGCTGATCTATGAACATGAGTATTCGTGTTAATTGAATCAATAAGAGAGATTGCTCAATTGCTATTTATGTTGGGATCAACATTTAGGAATTTGGCAACATCGAGTCACCTATGTATGCAAGGCTTCGTCACTTCTTGTCCACAATCTACACCAGGTTCTAAAACTTCAACAGTACAACTTGCTTATTTCGTCTGATTAATCTTGCCTTAGCTACCACATATTTGTCCAGAATGGATCTTTTATGTTCCTGAAAGGATTTTCTTTTGTGTCGGTACTGGATTAATTCAATTCGATTGTACCATGAAAACTTGACTTCTACAGGATGCAAGTAAAGCCTTCTACTCAACCAATTATTGTTGTTCTTCCACTCTGCCACTCGGATGGTTAGTGTGTAGTATTTTCAGTTGGGTCAATTTTCTAGATGGCAGTTCTGTATTTGAAAATAGTATATTGCAAGAGAAATTTATGGTCAAATTAATTTTGTAAGACCATACCAAGTCAATTTGCTCCTTATAAAAATGAAGGGAGGAGGGTATTCGTGTTGCACATCCCATCAACTCTCTTGCTATTCCTGTTTCACTAAACTAATCCCAACTTCTTTTGCTGCAAGTCACCAAGTCTAATTCAAAATTTACACAGATACCGAGTCTGCTAGGGCTTCAAGAAAGCAATACAGGGACACATTATACTCGGTTCTGTTCGATATGAATGTTCCTGCTGTTTGTTCTGTTGATCAGGTGTGCATTCTTATATTTATTTTCTTTTGATGTTTGCTCAGTGATATGCATCCATGTTGCACACCGTGATATCCTTTGCAGTTCATTAGATGCTTATTCATCATCATCATTTTAATGAACTTTGTTGGGGAGTCAAGATTTGAAGAAATTTTCTTCTTTGGGTTTAGCTTTTAGAAAATTGAACTGTTGGTTTAATTGCCTTGCACCATCACGAGTTTTAGCCCAAGTTGAAGATTTTTCAATTGATTGCTTCGCATGGAGTATATATTTGGTCTTGTGTCCTCAAGCTAAACACATCTCTCGAATTGTAGTTGAAGTACACCATTCTCAGGCTAATATCCTTTTATGTTCATACTCCCATGTATACTCACACTGCATTAATTTTCTGTCTCTGTTTTGATGATAATATCTTTTAACTTATTGCCATTTGCCTGCAGGCAGTTCTAGCTTTATATGCTGCTAAACGAACTTCTGGTATTGTTGTCAACATTGGATTTAATGCCACATCTATTGTTCCTAGTAAGTACTTAACATCAGTTTAATTCATGAATCCTTCCATGATTCAGTTGATTGCACTTATGTTCATTTACTGAGATTATCTCTAAAAATTGGGAAATTCCATTGCGTCTTTTACAATCTTACATGCTTCAAATTGTCTTTAGAAAGTAATGAGAAGATTTTTTTTTAATGTCAATAGACTACCTTAGCTTATATAAAAGCTAAGCATGGATATCTTGCCGAATATTTTCAATGTGAATGTATCAGCATAGTGTTACAAAATACCAAAATACTCACTGTTTCCATTCTTATACATGTTCTTTCAACAGTATTTCAAGGTAGGGTAATGCATGAGATAGGTGTTGAAACTGTGGGGCAAGGTGCCCTCAAACTTACTGGATTTCTGAAGGAACTAATGCAGCAGAGAAATATAACATTTGAGTCACTGTACACTGTTCGAACCATCAAAGAGGTAAAATCTTATTTATGCCAAGACAGCTAATGTTATTTGGATGGATTTGACCTAATAGCTACAGTCCAACTAATTGTGCCTGGGGGCCTATTAGTCGGGGCTAACCTGAATTTCACGTGACAGTTGACACACTTTTCCTCTATGTCATTGTAAAGAAACTTTGTTACGTCGCGGCTGATTATGAAGCAGAAAAACGTAAAGATACACAAGCTTCCTGTGAAGTAGATGGTGAAGGATGGTTTACTCTGTCTGAAGAAAGGTTCAAGACTGCAGAAATCCTTTTCCAGCCCCAGATTGGAGGAGTGTATGTCTCTTATCTGTCATATTTCCTATTATGTGATTTTATATGGTTCAATTATGGTTGCTCACTGCTGACCTTGCAGGCGTGCTATGGGCTTGCATAAAGCAGTATCTCTGTGTATGGATCACTGCTACAATTCAGAAGTGTTCGGTGATGACAACTGGTACAAGACAGTAGTTTTATCCGGTGGATCTTCATGCTTACCTGGTTTATCAGGTATGCTACCTTGTGCCTTTTTAATTCTGACTATATCAGAAATAATTGATATGAAAATAAACTGGAAAACTGATGCAAGTTTTCTATCTTGTGAATGATGTCATCTCTGTACATTACAGAGAGACTGGAAAAGGAGCTCCGTGAACTTCTTCCAGCACATATTTCAGAAGGGATAAGGGTTATTCCTCCCCCATTTGGCACCGATTCTGCCTGGTTTGGTGCAAAAATGATTAGCAACGTAAGGACAGCATCTCCCACCTTGATCATTGATTCTTATCATCAATTTTTTGCCACTTAAGTTTTACTAGTTGCTGACTTGATCAAATTTTAGGTGAGCACTTTCACGGAGGCATGGTGCATCAAGAAGAAGCAGTTTCGCCAGAAGACTCGTCGCAATGGTCCATCTTTTGTGAATGTGTGGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017322

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA017322&oldid=66216"