BGIOSGA017355

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Revision as of 04:43, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017355| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017355, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA017355

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017355, complete gene.

LocusTag

OSJNBA0064G10.23

Ensembl Transcript ID

BGIOSGA017355-TA

Ensembl Protein ID

BGIOSGA017355-PA

Length

5101

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:33818337..33823437

Sequence Coding Region

33818337..33819725,33821470..33821560,33821675..33821832,33821915..33821966,33822132..33822214
,33822327..33822420,33822854..33823437

Genome Context

<gbrowseImage1> name=IndicaChromosome04:33818337..33823437 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:33818337..33823437 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGGAGGCTGCGGCGGCGGCGGCGGGCCACATGGATCCGGTTGGCGACGAGGCGGCGGAGAGGAGGGAGATGGAGGAGAAGGAGGAGGAGGAGGAGGAGGATGAGGAGTTCTACGAGTCGCTGGATCGGATCCTGTCGTCGTCGTGCTCGTCCACGTCCGCCTCCGACGACGACGACCAGCAGCACCGGCGGAGGCGGCGGCACCACCCGCAGCCGCAGCAGCTGTCGTCGTCCGCGACGTTCTCCGCGTACGAGGTCTGGATCTCCGAGCCGACATCCGTCGAGGAGCGCCGCCGCGTGCTGCTGCGTCGGCTCGGCCTCGCCCACGACTCCGAGCCCCTGCCGCACCCGTCCCCACGCGTATCATCCTCCTCCCCTCGTTCGCCGACCCCTTCCCCCCCGTCCTCGTCGCCGCCACGGCCGGCTCCCGTGGTGGCCGCCGCGGAGGAGCCCAGATCCAGCGGCCACGGGAAGCCGCCGCTTGCGAGGAACCCGAGCGGCGGCGCGGAGCAATGCCGGATCCGGAACCTGGACGACGGTACGGAGTTCGAGGTCGGGGAGGTTCACGATGAGGTGGTCCGGGAGGTCGGCACTGGCCGGCAGCTCACCTTCGAGGAGTTCGAGCTCTGCATTGGCCGCTCCCCGATCGTCCAAGAGCTCATGCGCCGGGCCACCACAGCCGCATCATCCTCCACCTCCGACCAGGCCGCCCCAGCATCCAAGCCACGGAGGAAGCCTGGAGGCTGGCTGCGTGGCATCCGGCACCTGGCGGGAAGCGTTGCATACGGGCGCAGCAGCACCGATGAGAGGGACAAGGAGAAAGAGAAGGAGAAGAAGGAGAGGGAAGCGCGGCGCCTGAGCTCCGCCACCGATGACAGCCTTGACGGCAACGGCTCGCGCAATGCAGGGAGGGTCAGGGTGCGGCAGTATGGGAAGGCGTGCAAGGAGCTCACCGGGCTGTTCATGACACAAGAATTGGCTGCCCATTCGGGCTCAATCTGGTGTATCAACTTCAGCTTGGATGGACGATACCTTGCAAGCGCTGGCGAGGACCGTGTCATCCATGTGTGGGAGGTATCAGAGGGAGAAAGAAAGGGAGAACTGCTCGGGGAAGGTACGGTGGCAAGGGAGAACGGTGGTGGCTGCAGCCCGTTTCTTGCAGCTGTTGGGAATGGATCGCCGGAGCTGGCAACATTGTCATTGAGCTGTGCTGACGGGGGTTTTGTGGAGAAGAAGAGGAGGCCAAGGATGCAAAGCAGCCGGAAGTCTGTTGGCTCTGATCATCTAGTTGTGCCTGAATGTGTGTTTGGGTTCAGAGATAAACCAGTATGCTCTCTATTGGGTCACGCTGCCGATGTTCTTGATCTATCATGGTCCAAATCTCAGTACTTGCTTTCATCCTCAATGGACAAAACTGTTAAACTATGGGACATTACTACTAGTACCTGTCTGAAAACATTTTCACACACAGACTATGTGACTTGCATCCAGTTCAATCCCGTGGATGATAACTTCTTCATTAGTGGATCACTGGATGAAAAAGTACGCATTTGGAATGTACATGATCGTAAGATTGAGGATTGGAATGATCTTCATGAGATGGTCACTGCTGCGTGTTACTCCCCTGATGGACAGGTTGCACTGGTGGGATCACACAAGGGAAGCTGTCATTTATTTGATACAACTGAAAAGAAGCTTCAGTACAAAAGTCAGATAGAACTAAGAATCAGGAAGAAGAAGTCTGGCCAGAAGAAGATAACTGGCTTCCAGTTTGCTCCTGGAAGCTCGTCGGAAGTCCTGATTACCTCTGCAGATTCAAGAATCCGTGTTGTTAATGGTGATGAACTCGTTCACAAATTTAAAGGGTTCCGAAATACAAGTAGCCAAATATCCGCTTCTGTAGCTCCAAACGGGAAATATGTGGTCTGTGCCAGTGAGGACTCCCACGTGTATGTCTGGAGGCATGACAATACTTCCCATCCGAGCAGAAGCAGGAGTGCAGTTGATGTAACCAACTCATATGAGCATTTCCATTGCCATGATGTCACTGTGGCTATCACATGGCCCGGCGCTGAATCCCGTGGCTCATTCGGGTCCCGTAGCAGCAGAAACAGTGATTCAGACGATGCAGTGATGAACACGGGTCGGGATGCCCCTGTAGAGAACAGTGAGCATGATCTGAATGGCACTGTCAATAGATGCACCAAGCGCCCAGTTTGTGAAGGTGTTGCAAGCACAAGCAATCCTCCAGCGGATGGAGTATCAACGTCCTGGCCTGACGAGAAACAATCGTCTGCCAAGAGCAGTCCTGGTCACTGCTCATCCGACCTTTGCATTGGAGCTTTGGATGTTCAGCGCCGGTCAGCTTGGGGATTGGTGATTGTCACTGCAGGAAGGGGTGGTGAAATTAGGGTGTTCCAGAATTTCGGCTTCCCGGTTCAAGTGTAA</cdnaseq>

Protein Sequence

<aaseq>MPEAAAAAAGHMDPVGDEAAERREMEEKEEEEEEDEEFYESLDRILSSSCSSTSASDDDDQQHRRRRRHHPQPQQLSSSATFSAYEVWISEPTSVEERRRVLLRRLGLAHDSEPLPHPSPRVSSSSPRSPTPSPPSSSPPRPAPVVAAAEEPRSSGHGKPPLARNPSGGAEQCRIRNLDDGTEFEVGEVHDEVVREVGTGRQLTFEEFELCIGRSPIVQELMRRATTAASSSTSDQAAPASKPRRKPGGWLRGIRHLAGSVAYGRSSTDERDKEKEKEKKEREARRLSSATDDSLDGNGSRNAGRVRVRQYGKACKELTGLFMTQELAAHSGSIWCINFSLDGRYLASAGEDRVIHVWEVSEGERKGELLGEGTVARENGGGCSPFLAAVGNGSPELATLSLSCADGGFVEKKRRPRMQSSRKSVGSDHLVVPECVFGFRDKPVCSLLGHAADVLDLSWSKSQYLLSSSMDKTVKLWDITTSTCLKTFSHTDYVTCIQFNPVDDNFFISGSLDEKVRIWNVHDRKIEDWNDLHEMVTAACYSPDGQVALVGSHKGSCHLFDTTEKKLQYKSQIELRIRKKKSGQKKITGFQFAPGSSSEVLITSADSRIRVVNGDELVHKFKGFRNTSSQISASVAPNGKYVVCASEDSHVYVWRHDNTSHPSRSRSAVDVTNSYEHFHCHDVTVAITWPGAESRGSFGSRSSRNSDSDDAVMNTGRDAPVENSEHDLNGTVNRCTKRPVCEGVASTSNPPADGVSTSWPDEKQSSAKSSPGHCSSDLCIGALDVQRRSAWGLVIVTAGRGGEIRVFQNFGFPVQV</aaseq>

Gene Sequence

<dnaseqindica>1..1389#3134..3224#3339..3496#3579..3630#3796..3878#3991..4084#4518..5101#ATGCCGGAGGCTGCGGCGGCGGCGGCGGGCCACATGGATCCGGTTGGCGACGAGGCGGCGGAGAGGAGGGAGATGGAGGAGAAGGAGGAGGAGGAGGAGGAGGATGAGGAGTTCTACGAGTCGCTGGATCGGATCCTGTCGTCGTCGTGCTCGTCCACGTCCGCCTCCGACGACGACGACCAGCAGCACCGGCGGAGGCGGCGGCACCACCCGCAGCCGCAGCAGCTGTCGTCGTCCGCGACGTTCTCCGCGTACGAGGTCTGGATCTCCGAGCCGACATCCGTCGAGGAGCGCCGCCGCGTGCTGCTGCGTCGGCTCGGCCTCGCCCACGACTCCGAGCCCCTGCCGCACCCGTCCCCACGCGTATCATCCTCCTCCCCTCGTTCGCCGACCCCTTCCCCCCCGTCCTCGTCGCCGCCACGGCCGGCTCCCGTGGTGGCCGCCGCGGAGGAGCCCAGATCCAGCGGCCACGGGAAGCCGCCGCTTGCGAGGAACCCGAGCGGCGGCGCGGAGCAATGCCGGATCCGGAACCTGGACGACGGTACGGAGTTCGAGGTCGGGGAGGTTCACGATGAGGTGGTCCGGGAGGTCGGCACTGGCCGGCAGCTCACCTTCGAGGAGTTCGAGCTCTGCATTGGCCGCTCCCCGATCGTCCAAGAGCTCATGCGCCGGGCCACCACAGCCGCATCATCCTCCACCTCCGACCAGGCCGCCCCAGCATCCAAGCCACGGAGGAAGCCTGGAGGCTGGCTGCGTGGCATCCGGCACCTGGCGGGAAGCGTTGCATACGGGCGCAGCAGCACCGATGAGAGGGACAAGGAGAAAGAGAAGGAGAAGAAGGAGAGGGAAGCGCGGCGCCTGAGCTCCGCCACCGATGACAGCCTTGACGGCAACGGCTCGCGCAATGCAGGGAGGGTCAGGGTGCGGCAGTATGGGAAGGCGTGCAAGGAGCTCACCGGGCTGTTCATGACACAAGAATTGGCTGCCCATTCGGGCTCAATCTGGTGTATCAACTTCAGCTTGGATGGACGATACCTTGCAAGCGCTGGCGAGGACCGTGTCATCCATGTGTGGGAGGTATCAGAGGGAGAAAGAAAGGGAGAACTGCTCGGGGAAGGTACGGTGGCAAGGGAGAACGGTGGTGGCTGCAGCCCGTTTCTTGCAGCTGTTGGGAATGGATCGCCGGAGCTGGCAACATTGTCATTGAGCTGTGCTGACGGGGGTTTTGTGGAGAAGAAGAGGAGGCCAAGGATGCAAAGCAGCCGGAAGTCTGTTGGCTCTGATCATCTAGTTGTGCCTGAATGTGTGTTTGGGTTCAGAGATAAACCAGTATGCTCTCTATTGGGTCACGCTGCCGATGTTCTTGATCTATCATGGTCCAAATCTCAGGTGCGAACTTTGTGATCTTTCGATTGAATGTTAAACTGTTCAATCATAACTTTTGGCACTCTGGCATATGTTCTAAAAAATCACAATAATAAACCATCACACTGCCTTGTTCTTCAGGGCAACAAGGAAAAAGTTCTGTTTCGTTTTAGTGTTGTCTAGATAGTAGGACAGAAAAGAAGTCGTTTGTTGTTTTGATGATGTTTAGTACGGCAGTAAGGCCCGCATTGTTAAAAAGGCTAAAGATCAAATCAACGGGCTATTTGGAAAACAATGCATTTTGTCATTTTGCCATAGTAATTGAGCGTAGGCTTCAGCATGCAACATTTGGCTACATCTTGCTGATAGAAAAGTGAAATTGGTTGAGTGGTTGTTGAGCACTACAGTTTTGCACTGGTGAAAGATTCTTGCACTAGGCGTGAATTTGTTTCAACTTGCTAGGATGGTCTATTCTTTGACTTCATTGGCCTGTCTGTGAAATATGTATCATTGCCATGCCTCGTAACCTGGGAAACAGCACTCTTACTTGATCCTAACCTTTTCACACTTCAGCTATAAAGATCTGTATGTGGAATTGTTTTGCATAACTTAGTTTGGTTGTTATGATTTTTCTACTCAGCCTTTATAATTATAGGACTGTTATTGTGATTTACTCGGAAGATTTTACTGAGATAGTATAATTGAATCGTGATCTATCTGTTTTTTCCCTTACTTTTTTGTCATCCTGATTGATCTGTTGTCAATGCAACTGCAACATTAAGGAACAAATCTGTTGTTTAATTGCCTTCGTATGTTGGTCGGTTTTTTTTTTTTTTTTGGGGGTGGGGGGGGGGGGATTGGATAGTCAATGACCAAAATATACAAACTGTTGAAAACAGTCATCATAGTCCACTCATTTTCTTGATAGGCCCGAAGAAATTCTAATCAGATTTTGCTGCCTAATCAGTGGTGTTCCATTGGCCACTGAGCTGACGGGTACTCAAAATGTGGTTTTGTCAACACTCTTGCATATGCTTGAAATAGGCCCTACTGATATTCCATGATAATTGTTTGTCTTGACGGTATATACTTCATATATGGACTATGGTTTACAAATCCCTATTCGTAAATGCCATGTACAGTGCGATTGTGATATGTACTTTGACAGGAAAAGCATAAAGCATAGTCGTAAATGATGTGGTGATAATCCTCATTGGAAATAATTGTTTTGTTTGCATCTGACATTATCACGTATAATTCATCTGCACTCCCACGAATTTGCAAATATCACCTATACACTTAATCTGCGGGATCTATGTAGTGGTCAAATTCAAATACATGAGCAGCAAATCTGTATTATCCATCTTGTACTTCTGCAATCTCTTTTGTGTCTTTTCTGTTGTTCTAAGGTCACTTAGGTTTGACACATAAATACTATACAAAATATGCATATTTAGCTTTTGCCCCTGCTTTTTGATTGGCTTTTATGACACTTTTTTTATTACGAGCTGCATTCAAACTTGTTAACTATTCTAATCTGTAATTGAAAGAATTTCACCCATTCCTTAACCTAATTCACTTACTCACTGAATGGAATATATAACAATGAAACCATTAGTTGCTAATCAATGAACATGGACTTCACATCTGAAGTTTGTAAAACAAGCCCATTGTAAATTGATGTCTTTGAAGTTTGAAAGAAAACCAGTTTAAACTGAATACAACTATATGGAGGTGCTAACTGGTTGTTTGGTTTTTTATCATGCAGTACTTGCTTTCATCCTCAATGGACAAAACTGTTAAACTATGGGACATTACTACTAGTACCTGTCTGAAAACATTTTCACACACAGACTATGGTAAGTCTAGCTACAGGGTTATTTTCTATGTATGAACACCTTTCTTCAGTAACCATGTATATGTTTGGAGCAGCCTGACAATTAATTACTCCGCTGCACTCAAATTTGTTTCAGTGACTTGCATCCAGTTCAATCCCGTGGATGATAACTTCTTCATTAGTGGATCACTGGATGAAAAAGTACGCATTTGGAATGTACATGATCGTAAGATTGAGGATTGGAATGATCTTCATGAGATGGTCACTGCTGCGTGTTACTCCCCTGATGGACAGGTTGACCTAGTTTCTAGTGAATGATTATCTATTGGCCATAAAACACAATGTGCTTACTCTATATTTCTTTGTGCCTTTGAAGGTTGCACTGGTGGGATCACACAAGGGAAGCTGTCATTTATTTGATACAACTGGTATGTCTCTCAGTGCAGTTATTCCCCAATCTAATCTTAGGTTCTAGCTAAGAGTTCCTATTTGTGTAGCTATAAAATAGCATGATCTCAAAGGAAACAAGAGTAGAGACTTTAGAGTTTGCCTTCCCTCAATAATGAGCTTGCACATTTATTTTGTCTTTTCAGAAAAGAAGCTTCAGTACAAAAGTCAGATAGAACTAAGAATCAGGAAGAAGAAGTCTGGCCAGAAGAAGATAACTGGCTTCCAGGTAGTGCATAATTGCGTGGCGGACATTTGTTAAGAAAGAGTGGTCTGTACTCTAATAGTTAGATGTTAGCCTGATGCCTCTTGTACATGCTAAATATCTCTACTTCATACAGTTTGCTCCTGGAAGCTCGTCGGAAGTCCTGATTACCTCTGCAGATTCAAGAATCCGTGTTGTTAATGGTGATGAACTCGTTCACAAATTTAAAGGTAATGCTTCATTCACTGTACTTGTGTATCCTCTAGACGTTGACGGATGTAGAACACCTAGAAGGAACCTGGCCGATTTAAAGTAGTAAGTAACCCAAATTCAAGTGATTCATACTTTGGAAAACCCCCACATCCCACCTATTTACCTCAGTTCCTAACATGTTCACAGATCAAATCATAGGTTCCATTTCCCCAATTTCCCCCGATGGGTGTGTTTAGTTCACGCCAAAATTGGAAGTTTGATTGAAATTGGAACGATGTGACGGAAAAGTTGGAAGTTTGTGTGTGTAGGAAAGTTTTGATGTGATGGAAAAGTTGGAAACTAAACCAGGCCCTAGATCACAAGAACTGTGCACTTGATTGGTGCATTAGCTCACTCAGTAGGCCAGTATTTATACTGTTTCACTTACATTTTATTTGATCTTTTCACCAGGGTTCCGAAATACAAGTAGCCAAATATCCGCTTCTGTAGCTCCAAACGGGAAATATGTGGTCTGTGCCAGTGAGGACTCCCACGTGTATGTCTGGAGGCATGACAATACTTCCCATCCGAGCAGAAGCAGGAGTGCAGTTGATGTAACCAACTCATATGAGCATTTCCATTGCCATGATGTCACTGTGGCTATCACATGGCCCGGCGCTGAATCCCGTGGCTCATTCGGGTCCCGTAGCAGCAGAAACAGTGATTCAGACGATGCAGTGATGAACACGGGTCGGGATGCCCCTGTAGAGAACAGTGAGCATGATCTGAATGGCACTGTCAATAGATGCACCAAGCGCCCAGTTTGTGAAGGTGTTGCAAGCACAAGCAATCCTCCAGCGGATGGAGTATCAACGTCCTGGCCTGACGAGAAACAATCGTCTGCCAAGAGCAGTCCTGGTCACTGCTCATCCGACCTTTGCATTGGAGCTTTGGATGTTCAGCGCCGGTCAGCTTGGGGATTGGTGATTGTCACTGCAGGAAGGGGTGGTGAAATTAGGGTGTTCCAGAATTTCGGCTTCCCGGTTCAAGTGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017355