BGIOSGA017362

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Revision as of 04:44, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017362| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017362, complete gene.| tag = H0801D0...")
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Gene Name

BGIOSGA017362

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017362, complete gene.

LocusTag

H0801D08.21

Ensembl Transcript ID

BGIOSGA017362-TA

Ensembl Protein ID

BGIOSGA017362-PA

Length

5644

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:33891852..33897495

Sequence Coding Region

33891852..33891964,33892057..33892224,33892842..33892910,33894092..33894185,33894337..33894437
,33894928..33894973,33895059..33895118,33895216..33895284,33895758..33895841
,33895889..33895996,33896146..33896231,33896829..33896919,33896998..33897078
,33897160..33897234,33897361..33897495

Genome Context

<gbrowseImage1> name=IndicaChromosome04:33891852..33897495 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:33891852..33897495 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGCAGGTAATGGTGGTCGCGCGGAACTTCATGGACATGGTGGCCGCGCTGCCGGCCGCCAAGCTCGACATGCTCTACGACTCCGCCTTCATCTGCGAGGCCGTGCTCAGGTCGCTCCCGCCGCTCGCGAAGAAGTACGCGCTGCAGATGCTGTACGTGTCGGCGCCGGTGGCCGCTGCGGCCATGGAGGAGTGGGTGCTCGACGAGTACGCCGCCAAGCACAGGGTCGCCATCGATAGGCTGCTCCAACTGAGGGTATTTGTCGAGGTGCGCGATCGAAGAAAGGAGGTGAGCTACAAGATGAACCAGAAGTTCCAGGGCAACATGCAAAAGTATTTGGTTGATGGTGGAAGTTTACCAAGGGAACCTATACCATCGAGTGTCACTGCAAGGTTGCCTACATTGGCAGAATTAGAGTCTTTTGCTCTTGAGCAGTGGGAGTGCTTCTTGCTGCAATTGATCAACTCATCTCAAGTCGAGAGAGGGACAAGTTTCAGCTCATCCATGATGAGAACTTTTCAGCGAGGTCTTCTGAGTTCAAGAGATGGTGAAGCTCCAAGATTAACTGAGAACGGGTTCCAGTTTCTGCTGATGGAGACAAATGCTCAACTTTGGTACATCATGAGAGAATACATCTCATCAGCAGAGGAACGTGGTGTGGACCCCACGGAGTTGATATCATTTCTATTGGAACTTAGTTTTCATACATTAGGAGAGGCTTATAGCTTGAATACTCTGACCGATGTCCAAAGAAATGCTATTAGGGATCTGGCGGAGTTGGGACTGGTCAAACTTCAGCAGATGTCAAGAGTTAAGCCATGGCAGGGTCGAAAGGACAGCTGGTTCATACCTACAAAACTGGCTACAAATCTCTCAGCAAGCTTGTCAGATTCATCGTCTAACAAAGAGGGTTTTGTAGTTGTGGAGACAAATTTCCGGATGTATGCGTACTCAACTTCCAGATTACATTGTGAAATTCTGCGCCTTTTTTCAAGAGTGGAGTATCAACTTCCAAACCTAATTGTGGGATCTATTACAAAAGAAAGTCTTTATGGTGCTTTTGAGAATGGGATTACCGCTGAACAGATAATTTCATTCCTTCAGCAGAATGCTCATCCTCGTGTTGCTGACAAGATACCTGCAGTCCCAGAGAACGTTACAGATCAGATTAGGTTGTGGGAAACGGATCGTAACAGGGTTGATATGACCCTATCGCATTTATATGAAGATTTTCCAAGCAAGGATATGTTTGATCAATGCTGTGATTATGCAAGAGATCATGGGTGCTTGCTGTGGGAGGATGCGAAGAAGATGAGATTAATTGTACGAGTGGAGTTCCATTCAGAAATGCGTGAGTTCCTCCGGAGGCTAAGATAA</cdnaseq>

Protein Sequence

<aaseq>MPQVMVVARNFMDMVAALPAAKLDMLYDSAFICEAVLRSLPPLAKKYALQMLYVSAPVAAAAMEEWVLDEYAAKHRVAIDRLLQLRVFVEVRDRRKEVSYKMNQKFQGNMQKYLVDGGSLPREPIPSSVTARLPTLAELESFALEQWECFLLQLINSSQVERGTSFSSSMMRTFQRGLLSSRDGEAPRLTENGFQFLLMETNAQLWYIMREYISSAEERGVDPTELISFLLELSFHTLGEAYSLNTLTDVQRNAIRDLAELGLVKLQQMSRVKPWQGRKDSWFIPTKLATNLSASLSDSSSNKEGFVVVETNFRMYAYSTSRLHCEILRLFSRVEYQLPNLIVGSITKESLYGAFENGITAEQIISFLQQNAHPRVADKIPAVPENVTDQIRLWETDRNRVDMTLSHLYEDFPSKDMFDQCCDYARDHGCLLWEDAKKMRLIVRVEFHSEMREFLRRLR</aaseq>

Gene Sequence

<dnaseqindica>1..113#206..373#991..1059#2241..2334#2486..2586#3077..3122#3208..3267#3365..3433#3907..3990#4038..4145#4295..4380#4978..5068#5147..5227#5309..5383#5510..5644#ATGCCGCAGGTAATGGTGGTCGCGCGGAACTTCATGGACATGGTGGCCGCGCTGCCGGCCGCCAAGCTCGACATGCTCTACGACTCCGCCTTCATCTGCGAGGCCGTGCTCAGGTGCCCACTCCGCGCCGGCCTTGCCCTTGGCTGCGGCGATGCGTTTCCGTGCTGTATTTCATCGCGAGTGTTTTCGCCACTTCGTTGTGCAGGTCGCTCCCGCCGCTCGCGAAGAAGTACGCGCTGCAGATGCTGTACGTGTCGGCGCCGGTGGCCGCTGCGGCCATGGAGGAGTGGGTGCTCGACGAGTACGCCGCCAAGCACAGGGTCGCCATCGATAGGCTGCTCCAACTGAGGGTATTTGTCGAGGTGCGCGATCGGTAAGGCCTCATCCATCTCCACCAGCGCTGGGTGCTTCAAGTGCGCCGCAGACTTGCAACTTCCTCTATAGATCAGAAGTCGATGAACCAACTGTATAATTTCAATCCAGAATGTCAGATTTCTGGTGCTAATTTTGCCTTAGTGGTTTGCCAGCGCTGTCTTTGGCATGCCGGGGGGCCTGATATGTTATCATATATGTCAACTTACTGAAATTTTGGTGTAACTGTTTGGCCCTAAGGATGCTATGCAACTAGTAATGCTTTTATTTATTGTAAAAAGGAAACAGCAATATATTTGGCATGCCACATTTGGTCTGCAAAGTGCAAACTCTTAAGGTGAAATATGCAACAGCATTAAGAATTATGAATCAATGTTGGCATGAGAAGAAACCATCATGATGATTATACCCTTGGACGTGAACAAGTTTTATTCAGCTCTAGTTGGGGTAGTCGATTATTTTTAGCTAATTATACTGCTGGAACATCAATTTCATGTGTACTTTGTCACATGTTCTGTTTCTTGCATGTGCAGAGGCATAGCTAATATGAATCTTATAGCTTACTCAGTTTATGAATTACTTTAATTTTACTACATAGTAGACTATGTTTTTCTACAGAAGAAAGGAGGTGAGCTACAAGATGAACCAGAAGTTCCAGGGCAACATGCAAAAGTATTTGGTTGATGGGTAAGTTTTAGTAACTACTGAGCTACTTTTACTGAAAGCCACATACTTTTCTCATATTTTGAGCTAATTGCCTTTTCCCCGTCGAAACTTTATGATAGTGTAAGCATGTGCTTTATTTCCTTATATATATTATGTACAACTCTTAATATCGTAGAGTAATCCTTACTATATACTCCGGCATACCTTGCATGTATAGAAAATTTCTCCTGCACACATACATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTAATTGATCGGCCACCTGACCTGAAGTTTCTGTGTGAGATCGGCCACATTGACATGAAGTTTTTCTGTGTAATTTGGGGATCGATGTGTTGTTTGTCTTGTGAGCCTTGTGAATCCTTTCCCTGTTCTTGTGTCAGAATTCAGAAACGGAACATACGCACGTACCTAAACTTTTTTTCCTTACTTTCTGTTCATAATTCAGAGACTGATCTGGATCTGTTCTTCATCGTGTTGTGTTGATCCTGCGACACAAAGACCTGTAAACGTAACATATACTACTCTGCCGGCAACACGATTCGACCCGTACGGAATCAAGAACTTTCAGGCTCGCCATGCTTTGCCTCCTCACGGCGAAACCACAGCTTTGTTTATGGCGAAACCGCGACGCGAGCAGGAGGCAGACGCAGGATAGCCCTCTGCGTGCGGTTCGGGAGCCAGGAGACCGAGATGTGGTCGGTGCATGCCTTCGGCCTTGCCGTTCGTCAGGCACAACAACAAAAAGCTTCTCACATCCTCTCTATGTTCAGTGTTTCAGAGCTCAAGTTCAGTTATAAAAAACAGGGTTGGTTTATGATGTTACCCTTGGCTGTCCCTGCCACGGAAGGCCGCATCTTTGCCTGTCCCTGCACAATCCGGCAAGCCATTGTCGCTTTGCCCTTTAAGTAATCCAATCTACTGCTGCTACTCACCCTTCAGGTAACACATGTGTAGTAGTAGAAGAAGAGGGTGGTACAATTACACAGAATTCAGTACTTTTTCTGCCGGCGACAACGGCGGCAGTTGCGGCCGGCCGGCCGGCAAGATGGAGAAGAACAGAATAGTGTAGTGTGCATACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGACATACAGTTTATTTTCTGCAGTGGAAGTTTACCAAGGGAACCTATACCATCGAGTGTCACTGCAAGGTTGCCTACATTGGCAGAATTAGAGTCTTTTGCTCTTGAGCAGTGGGAGGTCAGGATGACAAAAGCTTATGTTTGCATGTATATTTTATTTTAGGGAAACACTTTCTATCTTTTTTTGCTCATCAGATCGTACTGTTTGAATGCTACCAATGTTCACTCCCCTAGTAAAGGAACTCATTCTTTTCTCTATGGGAAAATAGTGCTTCTTGCTGCAATTGATCAACTCATCTCAAGTCGAGAGAGGGACAAGTTTCAGCTCATCCATGATGAGAACTTTTCAGCGAGGTCTTCTGAGTTCAAGGTCCATCTTATTTCCTCCCTTGCTTTTGGCAGTGAGTTATGCATAAAATACGGACAATCAAATTTTGTAACAACAACAAAGAATATGCAGATTGCTGTAGCTCTTTCTTTTGTTAGTACAATTAGATGATAAATCCAATGGCTGTAGCTACATAGATATACACTAAGAAGAACTAGCAACTACTATACCCAAGATGGTGTGGGCTGACAGCAGATGGTCATTGGTTAATTGGTTTGGTTTATCTGTGTTCAGTTTACCTGTAAGTGAAATGGGGCTGATTGGTCTCTTAGTAATCCTAATAATCCATCTTTTAGCAGGTTGCTTTTTTTATTTGGATAGTTCAGATTTGCACCACATTTCTGGAATTTTAAAAGCTACTAGAGTTTTTTTGCCCTGCTATATATTCTCTAGCTTTATTGCATATGCTTTGCTCATTGCATATTCAAACAACAACTGAACGATAGAGTTCCTGATCTGATATATTCTGCAGAGATGGTGAAGCTCCAAGATTAACTGAGAACGGGTTCCAGTTTCTGGTGTGTCATTGGCTATCAGTTGATCCAATTATCTAACAGACTGCAGACTTCTATATTTGTTTCTCACTCTTTTCTATTTAACCAGCTGATGGAGACAAATGCTCAACTTTGGTACATCATGAGAGAATACATCTCATCAGCAGAGGTATCGGTTGCTTGCTCTTTCTAGAGCTTTTGATGTTACATTGTTGATTTATTTGTTGTATTTCCTTTGTGCTGATTGTTTTATTACTGTTGAATAGGAACGTGGTGTGGACCCCACGGAGTTGATATCATTTCTATTGGAACTTAGTTTTCATACATTAGGAGAGGTAAGTTAACCACTTTTAAAAGACTCTGGTGATGCTTCTTTTTTTTTTCAAAAATCGTTTTAAAAAGTGACCAGCTCCAGTTTTTCTTTTACAGAAATTAAAATATAATTTCCCTCAATAATAGTAGGTTATATTGATATAAGAAATAAACACGGCCACATTTTACGCAGATTATAGTTTATGAGAGGATTGGGTAAATTGTAGTGGTATATGAAACGGAGCATCTCAAAGATTTTCTATTGGTTTCTGATCTATCTAACAGAATAGGGACATCAATCTAACATGCCTGCTTAATAATGCTTACTAGTTCAGACAGTACCAGAGATTTAGTGCTTAAAAAGAGGTTATCAGTCTGTAGATTAATGTTATTAACTAAGCATTATCTTTCATCTGTTGTGGAGTCCAAGCTTTGTGGCCTGGTTCATCTGTTGCAAATTCGCTTCAACATGCTGTTTAACTTATTCATGCTTCAGGCTTATAGCTTGAATACTCTGACCGATGTCCAAAGAAATGCTATTAGGGATCTGGCGGAGTTGGGACTGGTCAAACTTCAGCAGGTAAAACTTTGATTTAGTCTTTTCCCTAGTCAACTTGATGAATACAGATGTCAAGAGTTAAGCCATGGCAGGGTCGAAAGGACAGCTGGTTCATACCTACAAAACTGGCTACAAATCTCTCAGCAAGCTTGTCAGATTCATCGTCTAACAAAGAGGTTTCAGAACATTTTATATCCTTGCTATTACAGTTATTCATGACGTCCAAATCTTTCATAACCTCAATCTACTCGTCACCTAAGCAACAACAAATGAAGATGAAAATACTTTCTGTTAATAATTACATTGTATGATGTTGGTGCTGTAGGGTTTTGTAGTTGTGGAGACAAATTTCCGGATGTATGCGTACTCAACTTCCAGATTACATTGTGAAATTCTGCGCCTTTTTTCAAGGTACGTGTGGTGCTAGATGATTGGCATAACTTAGCTCAACTATGTACTGGTTTTTTAACTACTGAATTACTGATCCATAGCTTCTGTTGCATCCTTGAACTACTTTCCTCTATTTATTATTAACATTTTGCCATATGTTTGGCATGCAAAAGAGCGACGGCAGGGAGCTAAGGGCTCTATACCCTTCATCACATTTTCTTTAGTTAACCAGCGTAACTCTGCCAATTGTCATGCGAGTATATGCCATAATCTTGATTTTTGGCTATGCTCTAGTAGAATGGTGATTGGTCACTGCTGTTTCAGTGACTGATACCGTTTATCTTGGTTGAATAGATGCCTTCATCTTGACTGAATTGACTCAGGAATGCCAACTGTTTCACTGGAATCCAGTACTAAATCAAGGTAGTAGGAAACACAATACAGTGAAGATGACTGAATATTAATAACTGTGTTGTAAGTAATATTGCTTATTAATTTTACAGGACACTTTCTTAAGGTTTTATTAAAATGACAGTAATAGTGGCGACTGTAGATTTTACCTTATATTACTGTCATCCTCCATTCTTCATTGAATGTTCAATAAGGATATTTTTGCAGAGTGGAGTATCAACTTCCAAACCTAATTGTGGGATCTATTACAAAAGAAAGTCTTTATGGTGCTTTTGAGAATGGGATTACCGCTGAACAGGTATCACTTGGAGTATGAATTTCTGCATGATCCATTATTAGATACTCAGAGTCATTCTTGTTTTGTGTTGTTTTTCAGATAATTTCATTCCTTCAGCAGAATGCTCATCCTCGTGTTGCTGACAAGATACCTGCAGTCCCAGAGAACGTTACAGATCAGGTACAACTGAACAAGGCAATGTTTTCATCCATGGCCAACCGTATTTGCCAAAGTAATTGAATTGGTAATTCCTCCATGCAGATTAGGTTGTGGGAAACGGATCGTAACAGGGTTGATATGACCCTATCGCATTTATATGAAGATTTTCCAAGCAAGGTAAAGCCCAGCATATTTAACTTGGAAATAGTACTGGGACAATATTGAGTTGCTTATACCATGTTGGTGTGTGCTTTTCATATTAGTGTAAACGCTAACATATTTATTCTACTGTTGCTTGTGCAGGATATGTTTGATCAATGCTGTGATTATGCAAGAGATCATGGGTGCTTGCTGTGGGAGGATGCGAAGAAGATGAGATTAATTGTACGAGTGGAGTTCCATTCAGAAATGCGTGAGTTCCTCCGGAGGCTAAGATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017362

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA017362&oldid=66256"