BGIOSGA017464

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Revision as of 02:19, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017464| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017464, complete gene.| tag = OS05G05...")
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Gene Name

BGIOSGA017464

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017464, complete gene.

LocusTag

OS05G0588700

Ensembl Transcript ID

BGIOSGA017464-TA

Ensembl Protein ID

BGIOSGA017464-PA

Length

6580

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:30676601..30683180

Sequence Coding Region

30683092..30683180,30682858..30683011,30682662..30682763,30682462..30682590,30682068..30682263
,30679939..30680093,30679711..30679862,30679488..30679594,30679134..30679394
,30678728..30679026,30678145..30678456,30677772..30677842,30677527..30677665
,30677259..30677411,30676889..30676989,30676601..30676721

Genome Context

<gbrowseImage1> name=IndicaChromosome05:30676601..30683180 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:30676601..30683180 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAATTTTTGGTACTTGTCAAGTCAGAGCTTCCTGACGACGTATACAGCCATTTCGTCCGATCTATGATCAAGATAAGGAGGCAGAGGAACATGTCGATTGAAAAATGCAAAGAAATTATTCTCGAGATATTGGACGGCCAACCTGAAGCCATACAGGTCTTCGAGCACTTCATCCAAGGATATAGCCCTTGCAGAGCAAAGATGCGTAGCAAGGCACACAATTTCGTTGAGAGAGTGAAGGCATGTCCTGATATCAGCCGCGAAGATTTCCATGCTTTGCTGAACGTTCTTGCTAAATATTATAAGAACGAAATCAAGACCAGCGAAGAAGTTCTCGAAAAGGTTGAGAGAATCATAGGTAACTATCCCGAGTTCCTAGAAGAGTTCAAAATTTTTGTGCCTCACCACCTAAGGGCTCATCTGCCAAATGAGAAATCTTGCACAAGTCCAAAGAGTAGTCGAGTCAGCGAGACGTTTGTGAGTTTTACTCTAGATGCTATGAATAAATTGGATGGTCTCCGAGTAAAAGCAACCAATGGAAGAAACCAAGCGACTCCATTGAAGTATACTAAGGACCAAAACCAAAACCATGAAGGCAGAGGTTATAGTTTGAGGCATAAACAAACTAAGAGAACCACTGGCCTGATTGAAAATCCTAGAAAGCAAGGTGATGACAAATCACCTCATGCAGAAGATGATGAGGAACACAAGGCTGAACCTTTGCTTCAGTGGAGTACCTCACGAGAAAACGAATTACCCCTAAAAGTGGATCCTAGTAATTGCAAGCATTGCACTCCTAGCTATTGCCTGCTACCAAAGAATTGTGTGACTCTCCAGTCAAGCTACCAAACTGAACTTGGAAGGTCTATTTTAAATGATTCTTTGGCTTCTGTTACATCTGGACGTGAGGATTGCTACAAGTTCAGAACTAAAAATCAATATGAAGAAAACATGTTTAAGTGTGAAGATGACTTATTTGAGAGTGACATGCTATTGCAGAGGTTTAGAGCAACTGCTGACTTTATTGAGGATCTTCAATATCGGTTTGGCAGCAATGTGAAAATTCAAGAACACCTAACTCCTCTACATAAGAGGTGCATTGAACAGCTATATGATGATTCTGGCATTGACATGCTTGATGCTTTGTCAGAATCTGAGAACACCAGTTCTGCTCTTGCTGTTATACTTTCTCGTCTAAATCAGAAGATAGGAGATTTCTCCGAGGCACGATTATCCTTGAATAAAATGTGCCCAGATACTGTTGCCAATAATTACTACAGATCACTTGATCATTGTAGTCCCTCCTTCAAACAACTAGACATGGAAAGGATGAGCCCAAAAGCTTTGCTGGCAGAAGACAAACAAATCAGTCAGATCAAATCTCATACTGATATTCACATTCATGAGGACGTAGGCGTTATCATTAACTATGCATATAGTAGAAGTTGTACTACTGAAGATAAGCCAATGATGAATTGGACAAAGTTAGTAAAGGCATTTGTTTCTGTGAAGTTTCAATGGCCAGACTTGAAGGATACAGTTTCTCGCAGAAACGTTTGTGAACATTGTGGGATGAGCAGAGATTTTCTCAATAATATTCCTGTTGCTGTGCTTACTAATGAGTTTGTTTTTTCTTCAAAGGAAGTGGAAAGTCTAAGAGCCAAGTCCAATGAGTCTACTTCTTCGCTTGATCATTTTGACGCGGAGGTTGAGGAGGGTGAGTTCATACCAGATGTAGAAAATATACAGTTGCGTGTTCGATGTTTGCCTACCAATAATTCTATGCATAGTACCTATGGACATTGGAGTGGATCTGAAGAGCATAAATCATCAAGAGATGACTCCAACAATGAGGTTGGAAGTTCAGAATATTTTGGAAGAACATCTGAAGAATGTGATGCAAACAGAGGAATATCTTGTTGCACTCTGGCTGTGCTCTGCCGGCTTCTCCAGGTTATGTACGAGAGACTACTAGTAGCTAAGGATCTTTCAGAAGGAGCAAGCACCCATGATTCATATGCACATTTCAAGGAGAAACTCTGCAGCCTGATTGATGGGTCTACTGACAATTGGAACTTTGAGCAGCACTGCTTGAAATTTCTTGGGCCCAACTCCTACGTACTATTTACTTTGGATAAGCTTATCGATCGTGTTATCAAGCAGATTTGCAAGATATATCCAAGCCGTGAAGACAGCTCTGTCCTTCAGCGGCAAGAGAGGTCAAGAAGAACATTTAACATTTTGAAAGACCCCGCTTTGCCGGCAAGAAGAACAAACTCGTCCAAAGAGCTGTTGCATCATCAAAATGCAAGAGGCCCATCAATTGAGTTGCCGAAGCAAGGCCGTGAGGAAGCAAAAGGAGGTTGTGAGTCCCATGGTGACACTGGAAAAATGAAACAGAACCATTTTCAGAGAAGCCCTGCAGAAGGCTATAGATTTGCAAGGATCTTTCAACACAAAATGTGCACGGCACAACAGCTATTTGAGGATATCTGGAGGGAAGCAGAAATTTTCATGGAGAAGCAGGACACAGCATAA</cdnaseq>

Protein Sequence

<aaseq>MEFLVLVKSELPDDVYSHFVRSMIKIRRQRNMSIEKCKEIILEILDGQPEAIQVFEHFIQGYSPCRAKMRSKAHNFVERVKACPDISREDFHALLNVLAKYYKNEIKTSEEVLEKVERIIGNYPEFLEEFKIFVPHHLRAHLPNEKSCTSPKSSRVSETFVSFTLDAMNKLDGLRVKATNGRNQATPLKYTKDQNQNHEGRGYSLRHKQTKRTTGLIENPRKQGDDKSPHAEDDEEHKAEPLLQWSTSRENELPLKVDPSNCKHCTPSYCLLPKNCVTLQSSYQTELGRSILNDSLASVTSGREDCYKFRTKNQYEENMFKCEDDLFESDMLLQRFRATADFIEDLQYRFGSNVKIQEHLTPLHKRCIEQLYDDSGIDMLDALSESENTSSALAVILSRLNQKIGDFSEARLSLNKMCPDTVANNYYRSLDHCSPSFKQLDMERMSPKALLAEDKQISQIKSHTDIHIHEDVGVIINYAYSRSCTTEDKPMMNWTKLVKAFVSVKFQWPDLKDTVSRRNVCEHCGMSRDFLNNIPVAVLTNEFVFSSKEVESLRAKSNESTSSLDHFDAEVEEGEFIPDVENIQLRVRCLPTNNSMHSTYGHWSGSEEHKSSRDDSNNEVGSSEYFGRTSEECDANRGISCCTLAVLCRLLQVMYERLLVAKDLSEGASTHDSYAHFKEKLCSLIDGSTDNWNFEQHCLKFLGPNSYVLFTLDKLIDRVIKQICKIYPSREDSSVLQRQERSRRTFNILKDPALPARRTNSSKELLHHQNARGPSIELPKQGREEAKGGCESHGDTGKMKQNHFQRSPAEGYRFARIFQHKMCTAQQLFEDIWREAEIFMEKQDTA</aaseq>

Gene Sequence

<dnaseqindica>1..89#170..323#418..519#591..719#918..1113#3088..3242#3319..3470#3587..3693#3787..4047#4155..4453#4725..5036#5339..5409#5516..5654#5770..5922#6192..6292#6460..6580#ATGGAATTTTTGGTACTTGTCAAGTCAGAGCTTCCTGACGACGTATACAGCCATTTCGTCCGATCTATGATCAAGATAAGGAGGCAGAGGTATCAATCACTATATCCTCTCATCTACTCGGCTGTGAGTTTTGATGACTGATGATAAAGAATCCTGATCCTGAATTCAGGAACATGTCGATTGAAAAATGCAAAGAAATTATTCTCGAGATATTGGACGGCCAACCTGAAGCCATACAGGTCTTCGAGCACTTCATCCAAGGATATAGCCCTTGCAGAGCAAAGATGCGTAGCAAGGCACACAATTTCGTTGAGAGAGTGAAGGTGCCCAAAGAAACCCGCTTTGCTTGCTCCCTCCTTGTGTGGTGTGGGTGCTCGTTTGGTACCAATTGTTGTTAACTTGACCTTATACCTGCAGGCATGTCCTGATATCAGCCGCGAAGATTTCCATGCTTTGCTGAACGTTCTTGCTAAATATTATAAGAACGAAATCAAGACCAGCGAAGAAGTTCTCGAAAAGGTGTTCATTCTTCAATAATGGCTTGACAAAATAATTGCAAAGGCCCTGATTTCACAATGATTTACTTGCAGGTTGAGAGAATCATAGGTAACTATCCCGAGTTCCTAGAAGAGTTCAAAATTTTTGTGCCTCACCACCTAAGGGCTCATCTGCCAAATGAGAAATCTTGCACAAGTCCAAAGAGTAGTCGAGTCAGCGAGGTATACATTACATGCTTCGCATAACATATGCTAAGGCCTAACTGCTAATGATCATTCCTCGTATATCTTATAACATGTTGGTGAACAATTATTTTATAAATAATTTATTGAACTCAGTATCACTAGCTCACTGCTTTCAGTAAAATTTTCTATTCTGAGCGCATGTGCCATCATCAGTTTATCAAATTTCCTTTGCAGACGTTTGTGAGTTTTACTCTAGATGCTATGAATAAATTGGATGGTCTCCGAGTAAAAGCAACCAATGGAAGAAACCAAGCGACTCCATTGAAGTATACTAAGGACCAAAACCAAAACCATGAAGGCAGAGGTTATAGTTTGAGGCATAAACAAACTAAGAGAACCACTGGCCTGATTGAAAATCCTAGAAAGCAAGGTGTGTGAAAGTTTTCTCTTAATTTGTTTATTCTCCAAATACAGGCGAGCCCTAGGTGCTTTGCTTTAACAACCTTCTCAGGAAATAATGAAGTTAGACACAAATAATGAACCCTTTCTTAATAACAGTCATACATGCCCAACTGTTTTCCTTTTTGCTAGAGAATGCACAAATGATTTGCGCATCTTTGCATTCACCTATTTCATGGTATCAGATGTTATTTCGAAGTATGCCCTAGCAATTGAGAGAAATTTGATAATTTGACACTTTCTTCGTCGCCAATTTGCTTTAACTGACTCTTGTGAGATGACATGTGTGACCATTTGAGGGAATAGAAGTGTGCCAGGGTGTCAAATAATCGAAGCCCACATCGTGGAGTGTCACTATCAAATTTCTCAGCAATTGAGTGCTACATTTGCTAGAGCTTATTTTCATATATGAAACCAGCATGGTAGCCCGCGCAGATTACGCGGCTAGCATCATTGTATTTTCTCTCATATAATAGTATAAATATATTCTCAATTTATTATTAAAATGACAACATAAATTTAAATTTTGTACTAACCAAACTACCAATGTGTAACAGTACATTCATATTGTATTGTATATACGTGATAGTTATTAATTATTTTTAATATCAAATTTTAGTTATTTCTAAATTGTATTCCCATATAGACTCTAGATTCGTCTTCCAATATTATTCCTTATTTTTTAATTCCGAATTTTCATTATTTGTAAGTTGTACTTCCTCCATTCACAATGTAAGTCATTCTAGCATTTCCCTCATTCATATTGATGTTAATGAATCTAGACATATATATCTATCTAGATTCGTTAACATCAATATGAATGTGGGAAATGCTAGAATGACTTACATTGTGAAACGGAAGGAGTATATATATATACTCTAGGCTCTTCTTCCAATATTATTTATTTTTAATTCTGAATTTTATTATTTCTAATTGTATTTCTATGTGGACTCTAGACTCATCTTTTAATATTCTTTATTTTTTAATTTTGAATTTCAGTTGCTTCTAAATTGTATTCCTATATGGACTCTAGACTCTTCTTCCCATATTTTTTAATTATGAATTTTAGTTTTTTGTAAATTGTATTTCTATATGGACTTTAAACTCTACTTTTAATTTTATTATTATTATTATTCCGAATTTTAGTTAATTATAAATTCCTATATGGACTCTATAATCTTATTCTAATATTCTTTATTTTTTAATTCTTCATTTCAGTTATTTCTAAATTGTATTTATTTCTAAATTATATTTCTATATGGACTATATACTCTTCTTTCAATATTCTTTTTTAATTCCGACTTTTAGTTATTTCTAAATTGTATATCTATATGGACTCTAACCTAATTTTAATTTACTTTTTTTTAATTCCGAATTTTTATTAGTTCTAAATTGTATACCGGCATGGACTGTAGTCTTCTCTTCCAATATTCTTTATTTTTTAATTCCGAATTTCAGCTATCTCTAAATTGTATTTCTATATGGACTCTGTTTTTCTTTTTCTCCGATTAATATGATAATTTCTAGGCCGTGAGAGCGAACGTGGAGGCAAGTTACTAGATAATAAATTACAATTTACAGTCTCTAGGAGGAATGCACCTTAGAATTTTTTAAATGAAAAGGTTAAAAGTTGAATATATTGGTTCTTAAACCCTTTCGTGCTTCCTAAATTATCCTAAAAAGAAACTATGAGGACCGCTATTGTGAACCATTCAATTCAAATGTTGTACAGCATGATGTTCCGACTTCTGAGTACAACTGTTTTCCAACAGTTAGGTGTGTTGGTTTTTATATTATCTAGTTTCTTTCTATTGATGTGCACATGATACAATGTAACAACAGACAAATGCAGTATCATTTTGTGTGGCTAGCCACTTGTTTTTGTATTTTGTATATATTTAATTGAACCCCTTGTGTTGAAGTTATGTTTAATCATTTATGATAGGTGATGACAAATCACCTCATGCAGAAGATGATGAGGAACACAAGGCTGAACCTTTGCTTCAGTGGAGTACCTCACGAGAAAACGAATTACCCCTAAAAGTGGATCCTAGTAATTGCAAGCATTGCACTCCTAGCTATTGCCTGCTACCAAAGAATGTAAATTCCTACAAACGCACAAGTTTTCCATGTAAATCATTGGCATCTGTTCTAACATTCTCTTTCTTGATCTCAGTGTGTGACTCTCCAGTCAAGCTACCAAACTGAACTTGGAAGGTCTATTTTAAATGATTCTTTGGCTTCTGTTACATCTGGACGTGAGGATTGCTACAAGTTCAGAACTAAAAATCAATATGAAGAAAACATGTTTAAGTGTGAAGATGACTTGTAAGTACACAGATGTTAGTTTTTCAGATGCTTCAGCACTGTTTTCATTCTTTCAGCTATCAGCAAAAATTTGCCTGGTCACTGATAATCAATGAATGTTGTGTACTACTTTTTAGATTTGAGAGTGACATGCTATTGCAGAGGTTTAGAGCAACTGCTGACTTTATTGAGGATCTTCAATATCGGTTTGGCAGCAATGTGAAAATTCAAGAACACCTAACTCGTAAGTATACTGTACTATGTAAATTTTTCGGAGCCAAAACTTTTCGAGTGGTTAGCTGAGTGTTACATTTTTTCCTTGTTTTTACATGTGCAGCTCTACATAAGAGGTGCATTGAACAGCTATATGATGATTCTGGCATTGACATGCTTGATGCTTTGTCAGAATCTGAGAACACCAGTTCTGCTCTTGCTGTTATACTTTCTCGTCTAAATCAGAAGATAGGAGATTTCTCCGAGGCACGATTATCCTTGAATAAAATGTGCCCAGATACTGTTGCCAATAATTACTACAGATCACTTGATCATTGTAGTCCCTCCTTCAAACAACTAGACATGGAAAGGATGAGCCCAAAAGGTACTTTTACTATTATGTACTGCTGAAGCTAGGTTCTGCGTTATAATTCATGGAAATTTTACCATTTTATTAGTTCGTTCTTACTCATTTCAGTATCTCTCTTGCAGCTTTGCTGGCAGAAGACAAACAAATCAGTCAGATCAAATCTCATACTGATATTCACATTCATGAGGACGTAGGCGTTATCATTAACTATGCATATAGTAGAAGTTGTACTACTGAAGATAAGCCAATGATGAATTGGACAAAGTTAGTAAAGGCATTTGTTTCTGTGAAGTTTCAATGGCCAGACTTGAAGGATACAGTTTCTCGCAGAAACGTTTGTGAACATTGTGGGATGAGCAGAGATTTTCTCAATAATATTCCTGTTGCTGTGCTTACTAATGAGTTTGTTTTTTCTTCAAAGGTATATGTACTTACAACACTTTACTCTTAGAATTATGATGATTTCGTGTTTTGGATTTGCATAAATAGCTTCTGTCATGAAAGTTAATTGATGAACACTTACTTTCTCATCTTTATCAAGTAAAAGTAACTTGGGTGTTTGTACAGTTTTCCCCTTTTCCTTAATATACATCGGTCGGCATTCTTCGCCGTCCTGGCGAAAAAAAAAAGTAACTTGGGTGACTTGAAAGATAAATGTAAGTAAAGCTACATGATTTTTATTTTCCATTCAGGAAGTGGAAAGTCTAAGAGCCAAGTCCAATGAGTCTACTTCTTCGCTTGATCATTTTGACGCGGAGGTTGAGGAGGGTGAGTTCATACCAGATGTAGAAAATATACAGTTGCGTGTTCGATGTTTGCCTACCAATAATTCTATGCATAGTACCTATGGACATTGGAGTGGATCTGAAGAGCATAAATCATCAAGAGATGACTCCAACAATGAGGTTGGAAGTTCAGAATATTTTGGAAGAACATCTGAAGAATGTGATGCAAACAGAGGAATATCTTGTTGCACTCTGGCTGTGCTCTGCCGGCTTCTCCAGGTATTTCAGTATGTTCCTATTACATATTTTTGTTTGGATTGGCGACTTTTAATATGCCAGTGAGCACTGAGCAAGACAGCAAGCTACACAGTTCAACACAAATATATATGCTCTTACTTTCAAAAAAATATTTATGTATGCTCTTACTTTGTTATACATGAAAGAGACGGCTTGCTCAATATGCATCACCATGATTGTTAATCTAATAGACAGCAGTATGATATTTCTTCTGGACAAACTATTGGCCTCTATACCTAATTATTGGCATTATGATCTTATTTTATTTTTAATTTATGTGGCAGGTTATGTACGAGAGACTACTAGTAGCTAAGGATCTTTCAGAAGGAGCAAGCACCCATGATTCATATGCACAGTAACGTCTAAGATTCTCACCTATTATCTATAAGTAGAATTATTCAAATTTCACCATTGAATATCTGTGTTTTAACAACAACTTTTTATTTTATTGAATGGTGTAGTTTCAAGGAGAAACTCTGCAGCCTGATTGATGGGTCTACTGACAATTGGAACTTTGAGCAGCACTGCTTGAAATTTCTTGGGCCCAACTCCTACGTACTATTTACTTTGGATAAGCTTATCGATCGTGTTATCAAGCAGGTAACTGAATTCCTTTGTGCAATGGTAAATTGGAAGTGCGGTTTAGCTTTTCTTGGTAACTTTGTTCATTAGTTCGTTCCAGACATTTGTTTAAAATTCACTTTTCTTCTTTCAGATTTGCAAGATATATCCAAGCCGTGAAGACAGCTCTGTCCTTCAGCGGCAAGAGAGGTCAAGAAGAACATTTAACATTTTGAAAGACCCCGCTTTGCCGGCAAGAAGAACAAACTCGTCCAAAGAGCTGTTGCATCATCAAAATGCAAGAGGCGTAAGTCTTCTACTCTAAAAACTTTACCTACTACCAGCAGCAAGCTACTAAACACGCCCACTTTCATCTAGTTGTTGAGAACGTGTTTAGTCATGCATGCTTAGCCATGAGATGTGTCATGTGTGCAAATGTGAAATATTGGTGTCATGCATTTCCCCTTTTTCCACCTCGCAAAAGAAATACATTTCCTCTGCGTTTCACTGAATTTATCAGATATTCACAACTGTTGCATGTGTCTTTTTTTCCCTTGTTGCGATATTCCAATTCAGCCATCAATTGAGTTGCCGAAGCAAGGCCGTGAGGAAGCAAAAGGAGGTTGTGAGTCCCATGGTGACACTGGAAAAATGAAACAGAACCATTTTCAGAGAAGGTAAGGATCCTTTGACAGAGTGATTAGAATTCCTTATTGGTTCCAGCTATTTCGACATTATAGATGTCTTTTACAGGAAAAAACGCGCTTTGGAGAACGGTCCACCGAGTTTTTCTCAGCCTGGCTCAGGGAATCAAGCTCATAATTGAACATGTAGTTATATGCAGCCCTGCAGAAGGCTATAGATTTGCAAGGATCTTTCAACACAAAATGTGCACGGCACAACAGCTATTTGAGGATATCTGGAGGGAAGCAGAAATTTTCATGGAGAAGCAGGACACAGCATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017464