BGIOSGA017519

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Revision as of 02:20, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017519| Description = Chloroplast reductoisomerase| Definition = Oryza sativa Indica Group BGIOSGA017519, complete gene.| tag = | tid = BG...")
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Gene Name

BGIOSGA017519

Description

Chloroplast reductoisomerase

Definition

Oryza sativa Indica Group BGIOSGA017519, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA017519-TA

Ensembl Protein ID

BGIOSGA017519-PA

Length

3117

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:29924504..29927620

Sequence Coding Region

29927360..29927620,29927165..29927257,29926828..29926893,29926354..29926494,29925886..29926113
,29925683..29925800,29925477..29925616,29925239..29925406,29924986..29925141
,29924504..29924869

Genome Context

<gbrowseImage1> name=IndicaChromosome05:29924504..29927620 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:29924504..29927620 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCCTCGACCACCCTCGCCTTATCCCACCCCAAAACCCTAGCCGCCGCCGCCGCCGCGGCCCCCAAGGCCCCGACGGCGCCGGCCGCCGTCTCCTTCCCGGCCTCACATGCCGCCTGCGCGCCGCTCGCCGCCCGACGCCGCGCGGTCACCGCCATGGTCGCGGCGCCGCCGGCCGTCGGGGCCGCCATGCCGTCGCTCGACTTCGACACATCCGTCTTCAACAAGGAGAAGGTCTCCCTCGCCGGCCACGAGGAGTATATCGTGAGGGGTGGGAGGAACCTGTTCCCGCTGCTTCCCGAGGCGTTCAAGGGCATCAAGCAGATCGGAGTGATTGGATGGGGCTCTCAGGGGCCTGCACAAGCCCAGAACCTGAGGGATTCACTAGCTGAAGCGAAGTCTGACATTGTTGTTAAGATTGGTCTCCGGAAAGGCTCTAAGTCATTTGATGAAGCACGTGCTGCTGGCTTTACTGAAGAGAGTGGAACCTTGGGTGATATTTGGGAGACTGTTTCTGGCAGCGACCTCGTGTTGCTGTTGATATCAGACGCTGCACAGGCAGACAACTATGAGAAAATCTTCTCTCACATGAAACCAAACAGTATTCTTGGTTTATCACATGGATTTTTGCTTGGACATTTGCAATCTGCTGGCCTTGATTTCCCAAAAAATATCAGCGTGATTGCTGTATGCCCCAAGGGAATGGGTCCATCCGTTCGGAGGTTATACGTACAAGGCAAAGAAATTAATGGTGCTGGTATCAACTCTAGTTTTGCTGTTCACCAGGATGTTGATGGAAGGGCAACTGATGTTGCTCTAGGATGGTCAGTTGCGCTGGGATCTCCCTTCACATTTGCTACTACCTTAGAACAGGAGTACAAGAGCGATATCTTTGGGGAGCGAGGCATTCTTCTTGGAGCTGTTCATGGCATCGTGGAGGCTCTGTTTAGGAGATACACAGAGCAAGGAATGGATGAAGAAATGGCATACAAAAACACCGTAGAGGGCATCACTGGAATTATCTCGAAAACTATCTCAAAGAAGGGAATGCTTGAAGTGTACAACTCCTTGACAGAGGAGGGGAAGAAGGAATTCAACAAGGCCTACAGTGCATCATTCTATCCTTGCATGGACATACTCTATGAGTGCTACGAAGATGTTGCCTCTGGAAGTGAAATCCGGAGTGTTGTGTTGGCTGGACGGAGATTTTACGAGAAGGAAGGCCTTCCTGCTTTCCCTATGGGCAACATCGACCAAACTCGTATGTGGAAGGTTGGTGAAAAGGTGCGGTCAACCCGACCAGAAAACGATCTTGGCCCCCTGCATCCCTTCACTGCTGGAGTCTACGTTGCACTGATGATGGCTCAGATCGAGGTCCTTAGAAAGAAGGGTCACTCCTACTCAGAGATCATCAACGAGAGCGTCATCGAGTCCGTGGACTCACTGAACCCCTTCATGCATGCTCGTGGAGTGGCCTTCATGGTTGACAACTGCTCAACGACGGCTCGTCTGGGATCAAGGAAATGGGCGCCACGCTTCGACTACATCCTGACCCAGCAAGCATTCGTGACAGTGGACAAGGATGCTCCCATCAACCAGGACCTCATCAGCAACTTCATGTCCGACCCCGTCCATGGCGCAATCGAGGTGTGCGCTGAGCTGCGGCCCACCGTCGACATCTCCGTGCCTGCCAACGCCGATTTCGTGCGCCCAGAGCTCCGGCAGTCATCGTAG</cdnaseq>

Protein Sequence

<aaseq>MAASTTLALSHPKTLAAAAAAAPKAPTAPAAVSFPASHAACAPLAARRRAVTAMVAAPPAVGAAMPSLDFDTSVFNKEKVSLAGHEEYIVRGGRNLFPLLPEAFKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAAGFTEESGTLGDIWETVSGSDLVLLLISDAAQADNYEKIFSHMKPNSILGLSHGFLLGHLQSAGLDFPKNISVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATDVALGWSVALGSPFTFATTLEQEYKSDIFGERGILLGAVHGIVEALFRRYTEQGMDEEMAYKNTVEGITGIISKTISKKGMLEVYNSLTEEGKKEFNKAYSASFYPCMDILYECYEDVASGSEIRSVVLAGRRFYEKEGLPAFPMGNIDQTRMWKVGEKVRSTRPENDLGPLHPFTAGVYVALMMAQIEVLRKKGHSYSEIINESVIESVDSLNPFMHARGVAFMVDNCSTTARLGSRKWAPRFDYILTQQAFVTVDKDAPINQDLISNFMSDPVHGAIEVCAELRPTVDISVPANADFVRPELRQSS</aaseq>

Gene Sequence

<dnaseqindica>1..261#364..456#728..793#1127..1267#1508..1735#1821..1938#2005..2144#2215..2382#2480..2635#2752..3117#ATGGCGGCCTCGACCACCCTCGCCTTATCCCACCCCAAAACCCTAGCCGCCGCCGCCGCCGCGGCCCCCAAGGCCCCGACGGCGCCGGCCGCCGTCTCCTTCCCGGCCTCACATGCCGCCTGCGCGCCGCTCGCCGCCCGACGCCGCGCGGTCACCGCCATGGTCGCGGCGCCGCCGGCCGTCGGGGCCGCCATGCCGTCGCTCGACTTCGACACATCCGTCTTCAACAAGGAGAAGGTCTCCCTCGCCGGCCACGAGGAGGTCCGCTCTTCTTGCTCCCGTTCCTCCCTTTTTCTGGATTACTTCTCTCTGTTTTTTCTCATATGCGATTTGTTTGTCTCGCTGAAATGTTCTGTCACGCAGTATATCGTGAGGGGTGGGAGGAACCTGTTCCCGCTGCTTCCCGAGGCGTTCAAGGGCATCAAGCAGATCGGAGTGATTGGATGGGGCTCTCAGGTTCGACAAAAAGAAAAAAAAACGCTTTCTTTCTTGCCTTCAGACTTATTTTCCCGTTCCATTTAGATGGTCAGTGTCGTGGATGTGACATTTCCAATCACTGGTTGATCAATTGCACAACAAATTGCTTGAATAATGAACAAATTGATGTGACCAATGTAGTGAATGGGTTGACAATTGATTTTTACTACATGGATTTCTCATGCTACTCGGGTTCAGGACAAGAAAACCACCTGTATTGTGCATGACAGAGTTACCGTTGCTTTTTCAGGGGCCTGCACAAGCCCAGAACCTGAGGGATTCACTAGCTGAAGCGAAGTCTGACATTGTTGTTAAGGTACTCTTATCTTGTACTGTATTCTCAGTTTTCATTCATAGGACACTTTTTGCAATACTTTGGTATGCAAGTCGCCCTGTTAACTGAAAGCTCTGAACCATGGTTTGAAGCCTCGACTGAACTAATATTCGTTCTCCTTTGTATATGGCTAGCTTGTTAAGGTGCACAGGCTACAACTGAATAATCCATTCTTATTTTGAAAAATAATTCGAGTTATACAATTTGTCAATTTGGACATTCTAATTCATAAGCCATTATATTTTTCTCCTCCTCACTTATGTACCTTTGCATTGTCCTGTTAGTCCAACATTCTATTCCGCCGTTTCCTTTCAGATTGGTCTCCGGAAAGGCTCTAAGTCATTTGATGAAGCACGTGCTGCTGGCTTTACTGAAGAGAGTGGAACCTTGGGTGATATTTGGGAGACTGTTTCTGGCAGCGACCTCGTGTTGCTGTTGATATCAGACGCTGCACAGGTTTACTTCAGGCTCTAGCTGCATGATTTTAGTTGCCACTTGATGTTGTTACTTTTACCAATGCTTGTTTGAATTGTGCTGAATTTCATGGTTCTGTTGTTTCATGGTCCTGTTTATTGAATTGAATCTCCTAGTTTTATTGTGCCCTCTACCCATTTAACATTTTCTATATGTTGCTTTCTCTTCTTACACTTTGCTGTGGTGTTCTGTCGGTATAATTTTTCTTTTCACTTTCTCCAGGCAGACAACTATGAGAAAATCTTCTCTCACATGAAACCAAACAGTATTCTTGGTTTATCACATGGATTTTTGCTTGGACATTTGCAATCTGCTGGCCTTGATTTCCCAAAAAATATCAGCGTGATTGCTGTATGCCCCAAGGGAATGGGTCCATCCGTTCGGAGGTTATACGTACAAGGCAAAGAAATTAATGGTGCTGGTATCAACTCTAGTTTTGCTGTTCACCAGGTAAGTTGGTTTCATTGAAAAACATATTTTCAATTATAGATTTTGTAAAGACATTCCTCTGTGCTTATGCACTTTTATTGCACAGGATGTTGATGGAAGGGCAACTGATGTTGCTCTAGGATGGTCAGTTGCGCTGGGATCTCCCTTCACATTTGCTACTACCTTAGAACAGGAGTACAAGAGCGATATCTTTGGGGAGCGAGGTGAGCCTACTTTCCTGTTTATGTTGCATTTGGTGATTGCACTGTAGCTAATCAGTTAGTGTCCAGGCATTCTTCTTGGAGCTGTTCATGGCATCGTGGAGGCTCTGTTTAGGAGATACACAGAGCAAGGAATGGATGAAGAAATGGCATACAAAAACACCGTAGAGGGCATCACTGGAATTATCTCGAAAACTATCTCAAAGAAGGTACACAATTATTGATAGTTTTATCATCCCTCTTTGTTGTTCACTTATAAGAGTATGTTTTAAAAACCAGGGAATGCTTGAAGTGTACAACTCCTTGACAGAGGAGGGGAAGAAGGAATTCAACAAGGCCTACAGTGCATCATTCTATCCTTGCATGGACATACTCTATGAGTGCTACGAAGATGTTGCCTCTGGAAGTGAAATCCGGAGTGTTGTGTTGGCTGGACGGAGATTTTACGTAAGTTATTCCTGCCTAAAGTTCACCATACTTTTCTTCGATTGTTTAGTCTGGAGTTCTCAGAGAGAGTAATGCCCGTAACTATTTGTTAACTCAGGAGAAGGAAGGCCTTCCTGCTTTCCCTATGGGCAACATCGACCAAACTCGTATGTGGAAGGTTGGTGAAAAGGTGCGGTCAACCCGACCAGAAAACGATCTTGGCCCCCTGCATCCCTTCACTGCTGGAGTCTACGTTGCACTGATGATGGCTCAGGTTAGTCTTCCCATAATTCCTCGTCAACCTCTCATATAGTGACAAAACCAACTGACAACAGTATATGCTTGAATCAATAGCGCTCAATTTTCCAATCTGTTTTGCAATGTTTGTAGATCGAGGTCCTTAGAAAGAAGGGTCACTCCTACTCAGAGATCATCAACGAGAGCGTCATCGAGTCCGTGGACTCACTGAACCCCTTCATGCATGCTCGTGGAGTGGCCTTCATGGTTGACAACTGCTCAACGACGGCTCGTCTGGGATCAAGGAAATGGGCGCCACGCTTCGACTACATCCTGACCCAGCAAGCATTCGTGACAGTGGACAAGGATGCTCCCATCAACCAGGACCTCATCAGCAACTTCATGTCCGACCCCGTCCATGGCGCAATCGAGGTGTGCGCTGAGCTGCGGCCCACCGTCGACATCTCCGTGCCTGCCAACGCCGATTTCGTGCGCCCAGAGCTCCGGCAGTCATCGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017519

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA017519&oldid=46275"