BGIOSGA017567

From RiceWiki
Revision as of 02:21, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017567| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017567, complete gene.| tag = OsJ_195...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA017567

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017567, complete gene.

LocusTag

OsJ_19542

Ensembl Transcript ID

BGIOSGA017567-TA

Ensembl Protein ID

BGIOSGA017567-PA

Length

2480

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:29255606..29258085

Sequence Coding Region

29258013..29258085,29257741..29257880,29256627..29256704,29256191..29256471,29255606..29255714

Genome Context

<gbrowseImage1> name=IndicaChromosome05:29255606..29258085 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:29255606..29258085 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACTCGGAGCACTGGATCTCGCGCCTGGCCGCCGCCAAGCGGTTCTACGCCGCGCAGCTCGGCCACGCCGATCGAGCGGGGATGGAGGAGGTGGACATGGACGAGGAGGTGAGGCCGGAGTTCGCGTGCCCCTACTGCTACGAGGACCACGACGTCGTCTCCCTCTGCGCGCACCTGGAGGAGGAGCACCCCTTCGAGCCCCATGCGGCGCCTTGCCCTATATGCTCTGATAAGATTGCAAAAGATATGCTTAATCATATCACTGTGCAACATGGGTACTTGTTCAAGAATCGTCGCAGGTTGCGCAGATTCGTTATTCCAGGCAGTCAAGCCCTATCTTTGCTGAGTCGAGATCTACGTGAAGCCCATTTGCAGGTGCTTCTGGGAGGTGGGGGACATAGGTCAAACAACAGCAGCAACACAACAAATATTTCAGCTGACCCTCTTCTGTCATCGTTTGGCCTTAGCTTTCCAACATCAGACACAGAGGAAACATCAAAACCACCTATTTCCATTCCAGATGATGCATCTGTGGTAAAAGAGACACCTGCTCAGCCATGGGATTCAAGTATTGACTCATCCCTCACAAGGGAAGAAAGGGAACAGAAACGGAAGCAAGCGAGTGTCAGAGCAACATTTGTGCAAGACCTGCTGCTCACTACTTTATTTGGAGATTAA</cdnaseq>

Protein Sequence

<aaseq>MDSEHWISRLAAAKRFYAAQLGHADRAGMEEVDMDEEVRPEFACPYCYEDHDVVSLCAHLEEEHPFEPHAAPCPICSDKIAKDMLNHITVQHGYLFKNRRRLRRFVIPGSQALSLLSRDLREAHLQVLLGGGGHRSNNSSNTTNISADPLLSSFGLSFPTSDTEETSKPPISIPDDASVVKETPAQPWDSSIDSSLTREEREQKRKQASVRATFVQDLLLTTLFGD</aaseq>

Gene Sequence

<dnaseqindica>1..73#206..345#1382..1459#1615..1895#2372..2480#ATGGACTCGGAGCACTGGATCTCGCGCCTGGCCGCCGCCAAGCGGTTCTACGCCGCGCAGCTCGGCCACGCCGGTGCGTCCACCTCGCTCTCTCTCTCTTCTCCTCGGATTTGTTCGATTTCTCCCTTTTGCCGTGCGGTGCGGGGGCTGTTTAATGGGGGGATTTTTTTTTTCTGATTATTTGGTTTGGTTTTGCTGGGTGCAGATCGAGCGGGGATGGAGGAGGTGGACATGGACGAGGAGGTGAGGCCGGAGTTCGCGTGCCCCTACTGCTACGAGGACCACGACGTCGTCTCCCTCTGCGCGCACCTGGAGGAGGAGCACCCCTTCGAGCCCCATGCGGCGGTGAGTTGTTCGTCCCCCTCGTAATCTGCTCTTGTTGGATGAGTAGAAGAGATGGCGTTCTTTGTTTTGGTTGACCTGGAGGACGAGCTCATGCTTAGAGCATATGTTGCTGAATTAAAAGATGGAAAGCTTGAGGTGTTGACCTGTACAGCGATGCAATTTTAGTTGGATCATTCTCTTGGGCATCGAAAGTAGTAATCAAGTTTGTAGTTTTGCATGGAGCCACGACCAGATTTGGGGCTGCGCAAAAATAGGTATATGGAGAGGCAAAAAAAAAGAAGTGGAAATGTTGGCAACCGTTGATGTTATAAGCAAATGCTTGAGGAAATGATAGCGTACTTAACTGTGGTTAATATATATAGCCATCAGCTCTCCAAAGATAAGTTAAGGCTCCGGTTGAAATGAGGAATGGTAAAATACATGAATAGGAGAAGCACAGGAAATAGATGACAAAGATAGACTCAAAGGAAATTTTCCAAGAGGTTGTATCTCTTGCTAGCTTTCCTTTAAAATCTACATGTATTGAGCCATTCCTAAGGAATTTCATAGGATTTGAGAAGCTCCAATCCTTTGTTTCAGAGGACCAAATATGAAACTTTCCTATAGGATTGGAATCCTACAAAATTCCTCCACAAATCCTTTGTTTCAAAGGAGGCCTAAATTTTGCTTGCCTCAGTTTTCAGGATCAGCTTGTCCGAAGTTCATATGGTCACTAGTTCGTTTATTAGGTAAAACTTGAGTATGTGTTATGGAACCTGGAGTGAAAGAGGAAGTTTGCTCTTGCCATCTTGTTGTGCAGCTGCTTTGCGTAAGGTGTAAAAACAGATTAGCTTTTGTATTTTGTGAAAAAAAAAATCAAATTGTTCTGTGTTGGACTCACACAGATGCCTCTTTTCTTATTCCTCAACTGCATAATCTTGTGTTTATCTGTTCTACTGCAAGCTCTATACATGGCTGGAAATATATTTTCTTTCCTTGTAATATTCTAGATAACAGTTTATTGTCTTGTTTTGATTGTTTCTTTCCTTCATTTCAGCCTTGCCCTATATGCTCTGATAAGATTGCAAAAGATATGCTTAATCATATCACTGTGCAACATGGGTACTTGTTCAAGGTACTTCCGCTTTCCTGTATATTTATCTAGTGCCTACTCAACCAATCAGCCCCATGTAATACATGCTGTGGATGACAGCTGATGCATAAAAGATATATATTTTTGAGTTTTGAGAGGTTCACACTTGAGGTTTGCTAACTTTATACAACCTGCAGAATCGTCGCAGGTTGCGCAGATTCGTTATTCCAGGCAGTCAAGCCCTATCTTTGCTGAGTCGAGATCTACGTGAAGCCCATTTGCAGGTGCTTCTGGGAGGTGGGGGACATAGGTCAAACAACAGCAGCAACACAACAAATATTTCAGCTGACCCTCTTCTGTCATCGTTTGGCCTTAGCTTTCCAACATCAGACACAGAGGAAACATCAAAACCACCTATTTCCATTCCAGATGATGCATCTGTGGTAAAAGAGACACCTGCTCAGCCATGGGATTCAAGGTATTTGCTCTTGTTCGTGCTAGATAGAAACACGTGGTATACTCGAAGGTTGTAGTGATTACCTTGTTCCTTGTTATCCTCCTGAATAACACCTGAGACTTGGTTGTCTTGCAAATTCAGAACTAGCATCGCTATCTGACTCATCACAAAATTTCATAAAAGCTATTGTTGTACTCGTGCCCTATGTCAATGTTTAGTTTCAATGCAATTTTAAGTACAATACGTTCAGAGAACATGAGCTCATGTTTGATCACAATAATTCGAGTCCAATAAGATAAGCCAGTATATTCCGTTGATAATAGCATTGTACGAAGTACTGAATAAATGTACAGTAGCAAGTTGTTTGACTGATGAGTAGCGTGTAGCAACAAGCTGCTGTATGGCTTCCTGCATGTTAGGACTATTTGGGAGGTATATATTATAAATTTCAAATTTTGGCAGTTGAATGATCTGCTAATTTTTTTTTTCATTTGCAGTATTGACTCATCCCTCACAAGGGAAGAAAGGGAACAGAAACGGAAGCAAGCGAGTGTCAGAGCAACATTTGTGCAAGACCTGCTGCTCACTACTTTATTTGGAGATTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017567