BGIOSGA017629

From RiceWiki
Revision as of 02:22, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017629| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017629, complete gene.| tag = A2| ti...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA017629

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017629, complete gene.

LocusTag

A2

Ensembl Transcript ID

BGIOSGA017629-TA

Ensembl Protein ID

BGIOSGA017629-PA

Length

1611

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:28497220..28498830

Sequence Coding Region

28498813..28498830,28498675..28498724,28498497..28498561,28497701..28497792,28497531..28497599
,28497220..28497258

Genome Context

<gbrowseImage1> name=IndicaChromosome05:28497220..28498830 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:28497220..28498830 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCACAGCGTGGTGCGGCAAATCCGCAAAACACTGGGCAACAAAAGGCTCAAGAAGATGCAAAGCAGGAAGCTGAGGAACGGCGGCAGATGATGCTTGCTCAGATTTTATCTTCTGAAGCTAGAGAAAGGCTCTCCCGCATAGCTTTGGTCAAACCTGATAAAGCAAGAGGGGTGGAGGATGTTCTTCTGAGAGCTGCTCAGTCCGGTGGAATATCTGAAAAGGTGTCTGAAGAAAGCTTATCTCACTTCTGGAGCAATCATACCCACACTAGCAAACAGACGAAAGTTACGATTCAGAGGCGCCGGAGCGTCCTTGACGACGATGACTAG</cdnaseq>

Protein Sequence

<aaseq>MAQRGAANPQNTGQQKAQEDAKQEAEERRQMMLAQILSSEARERLSRIALVKPDKARGVEDVLLRAAQSGGISEKVSEESLSHFWSNHTHTSKQTKVTIQRRRSVLDDDD</aaseq>

Gene Sequence

<dnaseqindica>1..18#107..156#270..334#1039..1130#1232..1300#1573..1611#ATGGCACAGCGTGGTGCGGTAAGCCTGTGGTTCATGGTGAAAAGTTGAAGCTGCCACAGCAATGTCCAGTTCTCTTGGCTGACTTTGATGTACTATTGTCCTTTAGGCAAATCCGCAAAACACTGGGCAACAAAAGGCTCAAGAAGATGCAAAGCAGTATGCTCTATTTGTCAACCATGTTTATCCATAATATGAAACTAATCTGTGTTATGTTATGTTGTGTAAAACTATGTGCAGAATTTCATTAGTTTCATTTAATTCTTAACCAGGGAAGCTGAGGAACGGCGGCAGATGATGCTTGCTCAGATTTTATCTTCTGAAGCTAGAGAAAGGCGTAAGTTCTATTTGTTGATGTCATTTTTGTTGAACATTTGAAGTTATTTTTAGATCGTTTACAGAGTTAAAGTCAGTTTTTTAGAGGATACAGCCTTGTAGGGAATAATGGAGTTCCATGTCTTTTTCCACAGTGCCAATGTGCCATGTACTTGTTCTCAACAGCAGTTTAGTGTATATATGCTTAGTGTCCTATCACGATACTTCTGAAAGCACCAAAGTGATTGATTGAGATAATTTACCAATGTGGCTATCTGCAACTTGAAGTTAGGGATCATCCTTATTCTATTAGGAGCCATTTTATTTGTTTCCTTGTTTTCAATGATGATAACAAATTAGGAAAAATATTGGGATTTAATCCAGATAAAAGTGTGAATGCTGTTTGTGCTGACTTGGGGTTGCCAGATGGTTTGCAATGTTGAATTACAGGGAAATCTGTGAACCTCCTCCTCAAACAAGTATATGCAGTAAACTAACAAAATTATGCATCTTGAATTGTATTTTTGTTGAGTATTGGTACTGTGGCAGTAGGCTGGACCAAACTGGCAAACAATTGCATGGATATATAATGCATAGTTTGCTTATCAGAATCAAATGTTCTGAATAAGGATGATTCTATGAAAAAGTCGTACCTTTAATCTCAATTGAGGTGACACATATTAAGGTTCTATAATCATGTATTTTTTTACTCTGTGGAGTTTTCAGTCTCCCGCATAGCTTTGGTCAAACCTGATAAAGCAAGAGGGGTGGAGGATGTTCTTCTGAGAGCTGCTCAGTCCGGTGGAATATCTGAAAAGGTAATAGAGGCGGTTAGCATAATCTTTGCTGTGTCAAGAGACTCAGAAGAAAGGTTTATCTGAAGGCTGACTTTCTTTGGGGGGAATTTCCTGGCTTTCAGGTGTCTGAAGAAAGCTTATCTCACTTCTGGAGCAATCATACCCACACTAGCAAACAGACGAAAGTTACGGTATGATAAACGTGGAAGCTTCTATCAGTTTTTGACGTACCATGTGCACTTAACTAAACAAACCTACCATGCTTCCAACAGTGGTTTTGGGTAGCTTCACTGCAACTAATTTAGTTTGGTTTGTAAAGATTCTCGTTTGTTGTGATCCTTTCCAAGTCACTGATTGTACATCATCAAAAAAAGGAAGAGAAAATGATGCTAATATAGGCTAGTCTGTTAAGGGAAAGCATCCAATACACAACTGATTCTTTTTACTATGTTTTATTTCACAGATTCAGAGGCGCCGGAGCGTCCTTGACGACGATGACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017629