BGIOSGA017667

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Revision as of 02:22, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017667| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017667, complete gene.| tag = OJ1741_...")
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Gene Name

BGIOSGA017667

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017667, complete gene.

LocusTag

OJ1741_B01.1

Ensembl Transcript ID

BGIOSGA017667-TA

Ensembl Protein ID

BGIOSGA017667-PA

Length

2901

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:27944824..27947724

Sequence Coding Region

27947366..27947724,27944990..27945926,27944824..27944856

Genome Context

<gbrowseImage1> name=IndicaChromosome05:27944824..27947724 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:27944824..27947724 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCCGCCGCGGCGGCGGTCGGCGTCGTCGCCTTGCTGTTGTTGCTGCCGCTCGCCGCGTCGGCGTACGGCGACGGGCTGGGCCGCGCGGCCGTGGGGGTCAACTGGGGCACGATGACGTCCCACCCCATACTCCCGTGCGAGGTGGTGCGGATGCTGGCGGCCAACGGCGTCGCCCGGGTGAAGATGTTCGACGCCGACCCCTGGACGGCCGCGCCGCTCGCCCACACCGGCATCCAGGTCATGCTCGCCGTCCCCAACGACCAGCTCGCGCGCCTCGCCGGCGACCCGCGCCGCGCCTACCGCTGGGCCGAGCAGAACGTCTCCGCCTACCTCGAGGCCGGCGTCGACGTCAGGTATGTGGCTGTTGGCAATGAGCCTTTTCTAAAGAGCTACAATGGCAGCCTAATCAATGTAACCTTTCCTGCGCTCAAGAACATGCAAAGAGCTCTAGACAAACTTGGTTTAGGTGATCATGTAAAGGCAGTTGTCCCACTCAATGCTGATGTCTACAACTCCCCTGAGAATAAACCAGTGCCATCAGCTGGGAGCTTCCGCAAGGATATCAATGCCCTCATGGTTGACATTGTCAATTTCCTCAATATGAATAATGCACCCTTTGTTGTTAACATCTACCCATTTCTCAGCCTATACCAAAATCCAAACTTCCCACTCAATTTTTCCTTCTTTGATGGTGGTAGCAAGCCAGTTTATGACAAAGGTATGGTCTACACCAATGTGTTTGATGCCAACTTTGACACCCTTGTTTGGTCACTAAGGAAGGCTGGTGTGCCTGACATGAAAATCATTGTTGGTGAGGTTGGTTGGCCAACTGATGGTGATAAACACGCAAATGTGAGATATGCACAGAAGTTCTATGATGGTTTTCTGAAGAAGATGGTCAGAAACATTGGGACACCTCTCAGACCTGGTTGGATGGAAGTTTACCTATTTGCACTGATTGATGAGAACCAGAAGAGTGTACTGCCTGGGCGCTTTGAACGTCACTGGGGACTACTCACATATGATGGAAAACCAAAGTTCTCTATGGATCTCAGTGGAGATGGCCTAGACAATCTGGTTGGAGTTGAAGTGGAATATTTGCCAGCACAGTGGTGTGTTTTCAACAAGGATGCAAAGGATAAGTACAAAGACTTGCCAGCCGCTGTAAACTACGCATGCTCAAATGCAGATTGTACACCACTGGGCTATGGATCCTCCTGCAATAATCTTAGCCATGACGGCAACATATCATATGCATTCAACATCTATTTCCAAACAATGGACCAGGATAGTCAGAGACAATGGAGGACCGGTAAGTGCTGA</cdnaseq>

Protein Sequence

<aaseq>MAAAAAAVGVVALLLLLPLAASAYGDGLGRAAVGVNWGTMTSHPILPCEVVRMLAANGVARVKMFDADPWTAAPLAHTGIQVMLAVPNDQLARLAGDPRRAYRWAEQNVSAYLEAGVDVRYVAVGNEPFLKSYNGSLINVTFPALKNMQRALDKLGLGDHVKAVVPLNADVYNSPENKPVPSAGSFRKDINALMVDIVNFLNMNNAPFVVNIYPFLSLYQNPNFPLNFSFFDGGSKPVYDKGMVYTNVFDANFDTLVWSLRKAGVPDMKIIVGEVGWPTDGDKHANVRYAQKFYDGFLKKMVRNIGTPLRPGWMEVYLFALIDENQKSVLPGRFERHWGLLTYDGKPKFSMDLSGDGLDNLVGVEVEYLPAQWCVFNKDAKDKYKDLPAAVNYACSNADCTPLGYGSSCNNLSHDGNISYAFNIYFQTMDQDSQRQWRTGKC</aaseq>

Gene Sequence

<dnaseqindica>1..359#1799..2735#2869..2901#ATGGCGGCCGCCGCGGCGGCGGTCGGCGTCGTCGCCTTGCTGTTGTTGCTGCCGCTCGCCGCGTCGGCGTACGGCGACGGGCTGGGCCGCGCGGCCGTGGGGGTCAACTGGGGCACGATGACGTCCCACCCCATACTCCCGTGCGAGGTGGTGCGGATGCTGGCGGCCAACGGCGTCGCCCGGGTGAAGATGTTCGACGCCGACCCCTGGACGGCCGCGCCGCTCGCCCACACCGGCATCCAGGTCATGCTCGCCGTCCCCAACGACCAGCTCGCGCGCCTCGCCGGCGACCCGCGCCGCGCCTACCGCTGGGCCGAGCAGAACGTCTCCGCCTACCTCGAGGCCGGCGTCGACGTCAGGTACGTACGCGCCCCCACTGCTGCTCTCGCTCGCTCTACGGGTGGTGTGCTATGGTTTGCCTCGGCCGCCGGCGCGGTGTCGCGTGTGCTTCTAGTTTGCGGCTGCATGCCAAGTGTTCGGTGTTGCGTGCGGTGAGACGATGCGGCTCTTACTCTGAGCGCGGGCGTGCGAGCTAGGTGAGGGTATGGAATGTCTGTTCGGGCGCGTCGAAAGTGTTCGACGGAATTCCACCGTTGGACATGCAGTTTCGTGTAACCGTGATGTCCGTGATCGATTGATCGTGTAGTGCCTGTCTGTTTGATCGGATGGTGCTGTGAGTGTGAGATGCACATGCATGCTTGCATTTGTGGTTCATGCAGAATGGATAGTTTTCTGTTGTTGCAGTGCTTCCTGGGTGGCTGGGTTAAGGTTCCCCTGTCGCCTGAAAGACATGAGTGTTAATTAGACATCACTTACAATCGTGTCACTTAGATAAATACAGTAATGTATCCTGCATCATGCAATTAGTTTCATACTTCATGCATATATTGCATATGGGTGTGTAGCAGTAGCCGTACTGAGGGGATGTTTGGTTGATGCCTAACCTTGCCATAACTAAGTTTAGACTAGTTGTGGCATGGTGGCATAAATGTGGCTTAGAAATAGTTGGCCACAAGTGTGGCATGCTTAGCTCTAAATTTGAGAGCATGACATGTGGGTCCCAAAGTTAAGAAAGTGTGGCATAACACAATTGCGGCAGCGAACCAAACACATGCCTAAAAAACTGTGGCATGGCTAAAGTGTGGCGTGGCAAAGTGTGGCAACCAACCAAACAGCCCCTCAAATCTGTTTTGTGTATGATACCTCAGGGTCGAGAGTTAACGTTGTAAATGTTGGAGAAACATGCTTTGATTGGTTTATGGAATACAGTGTGTTTAGATCATGTTCCCTCTGTTGATGGTGTTTATATGGTTCCATGGATGTTGACTGAACTAGTTCATTGAGGAAACCTATTCAAAATGTGGAGTAAGTAAACGCAGGAATGAGCCGACAATTGGATTACCATTTCTAGGCTTCTAATTGTAGATGCCAACGGAAGCCAGAATGAACTTGTATTTATGATATTTAGAGCATTTTAATCCTTAATTGTGCTGAATTTACTGTGGAAATTTAGGTGTGTTTTTATTGGTGAAGAACAGTAGGAATTCAGTGGATTTCATTGACTTAATTCCTACTGGATTTCAGTGACTCCACTTTCTAGCAATTCCTTTTGTAATTACTGTGCTACTTAAGTTTATCATGCATGATGTGCCAAACTGAGCATATCTCTATGAATCCGATGGGCGATGGTGTGTTGCATATAAAATGTATGTACTTGCCTAGTTACTTATTTCTGAATATTCACATTGTCTTTGGTGATACTCTCCTGTTATATTCACTGGTTATGTTAATTGCTCAGGTATGTGGCTGTTGGCAATGAGCCTTTTCTAAAGAGCTACAATGGCAGCCTAATCAATGTAACCTTTCCTGCGCTCAAGAACATGCAAAGAGCTCTAGACAAACTTGGTTTAGGTGATCATGTAAAGGCAGTTGTCCCACTCAATGCTGATGTCTACAACTCCCCTGAGAATAAACCAGTGCCATCAGCTGGGAGCTTCCGCAAGGATATCAATGCCCTCATGGTTGACATTGTCAATTTCCTCAATATGAATAATGCACCCTTTGTTGTTAACATCTACCCATTTCTCAGCCTATACCAAAATCCAAACTTCCCACTCAATTTTTCCTTCTTTGATGGTGGTAGCAAGCCAGTTTATGACAAAGGTATGGTCTACACCAATGTGTTTGATGCCAACTTTGACACCCTTGTTTGGTCACTAAGGAAGGCTGGTGTGCCTGACATGAAAATCATTGTTGGTGAGGTTGGTTGGCCAACTGATGGTGATAAACACGCAAATGTGAGATATGCACAGAAGTTCTATGATGGTTTTCTGAAGAAGATGGTCAGAAACATTGGGACACCTCTCAGACCTGGTTGGATGGAAGTTTACCTATTTGCACTGATTGATGAGAACCAGAAGAGTGTACTGCCTGGGCGCTTTGAACGTCACTGGGGACTACTCACATATGATGGAAAACCAAAGTTCTCTATGGATCTCAGTGGAGATGGCCTAGACAATCTGGTTGGAGTTGAAGTGGAATATTTGCCAGCACAGTGGTGTGTTTTCAACAAGGATGCAAAGGATAAGTACAAAGACTTGCCAGCCGCTGTAAACTACGCATGCTCAAATGCAGATTGTACACCACTGGGCTATGGATCCTCCTGCAATAATCTTAGCCATGACGGCAACATATCATATGCATTCAACATCTATTTCCAAACAATGGACCAGGATGTTAGGGCATGCTCTTTTGAAGGCCTCGCAAAGATCACAACGATAAACGCATCGCAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATGGTTGTGTCCATTCTTACATAGAGTCAGAGACAATGGAGGACCGGTAAGTGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017667