BGIOSGA017668

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Revision as of 02:22, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017668| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017668, complete gene.| tag = OJ1014_...")
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Gene Name

BGIOSGA017668

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017668, complete gene.

LocusTag

OJ1014_C08.6

Ensembl Transcript ID

BGIOSGA017668-TA

Ensembl Protein ID

BGIOSGA017668-PA

Length

5677

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:27920824..27926500

Sequence Coding Region

27926001..27926500,27924157..27924259,27923664..27924070,27922806..27923566,27922366..27922480
,27922085..27922207,27921099..27921142,27920936..27920981,27920824..27920851

Genome Context

<gbrowseImage1> name=IndicaChromosome05:27920824..27926500 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:27920824..27926500 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGACAGGGAGAAGGCGGAGGAGACGGAGGAGGAGGAGTACGAGAGCGACCTCGACGACGCGCCCCTCCCGGCGGTGCGGCGCCGGGACGCGGCGAGCGATGACGAGGAGGAGGAGGAGGAGGAGGAAGGGGCGAGGCCCTCTCCGCCTACGAAGGCCGGATCCGACGCGGAATCCGACGGGCAAGGCGCCGCCGAGGTGTACGACGACGACGACGCGTACGAAGATGACGAAGGGTACGAGGAATACGGGGAGGTGTACGAGGAGTTCGAGCAAGGGCGAGGCGTTGCGGGCGGAGTGGCCACCGGGGCGGTGGCCGCAGCGGGGGAGGAGGCGGGGATGGGTATGAAGGGGGAAGCGGAAGGTGAGGCGTCGGCGGCAGCGGCGGAGGGAGAGGAGGGGAAGAAGGGGAGCGAGCCCTATGCCGTCCCGACGGCTGGCGCCTTCTACATGCACGACGACCGCTTCCAGGATGCCCGTGGCCGTGGGCGCCAAAGGAGAATGGTGGGTGATAGACGGCTGTGGAATGCTAAAGAGGATCAAGCGTGGGTCCATGACAGATTTGATGAAATGAATTTACATGATTTCCATAATGACTACACAAGAAGAAGGCCCAGAGGTCGATTTAGAGGACGTGGTGGTGCACCTGTTGGTAAAGTTCGTGGTGGTAGCCATGATAATTTCAGAGGCAACAGGTCGCAGACATACTATCGTGATGGTGCTAAGAACTACATATACGTTCCGAAAGAACCTCATAGTTACCATGATAACACCAAGAAGGTTCAACAGGTTCTGAATGATAATGGCAAGAATAGAACCATCAAACCACCTAATCCTCGTGATGGCGATGCCAACAATTTCGATTTTGTTCGAAAAGAGTCTCGCCCTCTTTATGGCAATGCCAAAAGTAATAAGAGTGCATCGAGAGTAGTTCGAGGAAGAGGCTCTAAACGTTACCAACCACGTTGGAGGAGTACCGCTGAGATATCTTCAGAGCATAATAATAAATCACAAAATCTTGAAAACACTTCTTCAAATGCAAACTTGGGAAAACACCAACATCAAGCTTCAAATTCTCAACCAGAACGAGGATTTCCGATGAAGCAGAGCTTTGCATCAAATTTGAATTCAGCTTCACCTCCCTTTTACCCTTCTAGGCCATCTCATCAGGAACTCCCAGTGAGTCAGAGGGGGGATGGACAACCCAGTACCACTACTAGACACTTCTCATCCCCCATTGGTATGGAGCATGTCTCTCCAACCCCACAGTATGGCCCTCTCTTAAGAGGGAAAGCCTTTGTACCGTCTGCTGGGCATGGCAAGTTGCATGCTGAAGTTCCTATAAAGGGCATGGATCATCCTTCATTTCATTCATCTACATCATCATCAACTAGTCAATTTCCTATAGCTACTAATCAGGTCACTGGAAATTCGGCTAAGTCCCCACACCCAATTGTCCAACAAAGGTTGGTTCAATCATTTAATCAATCCACACCAAAGATGCCTGGTCAGATGTTTGCTGCGCAATTTGCTAGCAGTGATAAATTGCCATCTTCCATGCAATCTACATCAACAATTTTGACTGAAGGCACTGAAATTTCTTCACCTCATGGTTCCAACAAATCTAATACTAGATTGATGGCAAAGGGACAACATAGTGACCAGGGAGAAGAACATGCTTCTTTTATGTATGGTGGAGCTCAAGTTCTTGGGACTACAGGATCACTTGGTGACCAAAATTTCCATGGAACCCCTGCACTATTTCCAGTTATGCAGTTTGGAGGCCAGCATCCAGGTGGGACTGGCGTTCCCTCAATTGGCATGGCTCTACCAGGATTTGTGTCTCAACAACAACTTGGTCTGAGCAATTCTGAAATGACTTGGCTACCGATATTGGCTGGTGCTTCTGGAGCTTTGGGAGCAACGTATGGTTCACCTTATATTACTGTAGATGGCAGCTATTATCCCCGAACTTCTGAACATGCATCTTCATCAGTTTCTTTGAGAGAACCCAGTGCCTCTTCTCAGTTGAAGTCACAAGAAATAACTGAGGCTTTAAATGATGAACTTAGTCAACGCCAACATAAACCTCGGAGATATTCGGAAATGAACTTTGGCAAATGA</cdnaseq>

Protein Sequence

<aaseq>MADREKAEETEEEEYESDLDDAPLPAVRRRDAASDDEEEEEEEEGARPSPPTKAGSDAESDGQGAAEVYDDDDAYEDDEGYEEYGEVYEEFEQGRGVAGGVATGAVAAAGEEAGMGMKGEAEGEASAAAAEGEEGKKGSEPYAVPTAGAFYMHDDRFQDARGRGRQRRMVGDRRLWNAKEDQAWVHDRFDEMNLHDFHNDYTRRRPRGRFRGRGGAPVGKVRGGSHDNFRGNRSQTYYRDGAKNYIYVPKEPHSYHDNTKKVQQVLNDNGKNRTIKPPNPRDGDANNFDFVRKESRPLYGNAKSNKSASRVVRGRGSKRYQPRWRSTAEISSEHNNKSQNLENTSSNANLGKHQHQASNSQPERGFPMKQSFASNLNSASPPFYPSRPSHQELPVSQRGDGQPSTTTRHFSSPIGMEHVSPTPQYGPLLRGKAFVPSAGHGKLHAEVPIKGMDHPSFHSSTSSSTSQFPIATNQVTGNSAKSPHPIVQQRLVQSFNQSTPKMPGQMFAAQFASSDKLPSSMQSTSTILTEGTEISSPHGSNKSNTRLMAKGQHSDQGEEHASFMYGGAQVLGTTGSLGDQNFHGTPALFPVMQFGGQHPGGTGVPSIGMALPGFVSQQQLGLSNSEMTWLPILAGASGALGATYGSPYITVDGSYYPRTSEHASSSVSLREPSASSQLKSQEITEALNDELSQRQHKPRRYSEMNFGK</aaseq>

Gene Sequence

<dnaseqindica>1..500#2242..2344#2431..2837#2935..3695#4021..4135#4294..4416#5359..5402#5520..5565#5650..5677#ATGGCCGACAGGGAGAAGGCGGAGGAGACGGAGGAGGAGGAGTACGAGAGCGACCTCGACGACGCGCCCCTCCCGGCGGTGCGGCGCCGGGACGCGGCGAGCGATGACGAGGAGGAGGAGGAGGAGGAGGAAGGGGCGAGGCCCTCTCCGCCTACGAAGGCCGGATCCGACGCGGAATCCGACGGGCAAGGCGCCGCCGAGGTGTACGACGACGACGACGCGTACGAAGATGACGAAGGGTACGAGGAATACGGGGAGGTGTACGAGGAGTTCGAGCAAGGGCGAGGCGTTGCGGGCGGAGTGGCCACCGGGGCGGTGGCCGCAGCGGGGGAGGAGGCGGGGATGGGTATGAAGGGGGAAGCGGAAGGTGAGGCGTCGGCGGCAGCGGCGGAGGGAGAGGAGGGGAAGAAGGGGAGCGAGCCCTATGCCGTCCCGACGGCTGGCGCCTTCTACATGCACGACGACCGCTTCCAGGATGCCCGTGGCCGTGGGCGCCAAAGGTTCCGGCCTTTCAACCTTCAATTGCTGCTTGATTTGCTGTTGTTTCCTTATATATCTAGGGTATGATGATATGATCTAGAGAACTTGGTAGCCTAGTTTCAACCTTCACTAGTTTGGTAACCATTAGTGTTCTCTGAAACCACTGCTTAAGTGCATTGCGTGTTCAATAGTTCAATTAATTTCATCTAAGTTGATAACACGAGTGTGTCATGCTAACTAGTCCTGTGGAATTGTTAGAAGAGGCTAAAGTTTGATATTTATATGTGCAGTAGTAGTGTAGTATTTGATAGATACAAGTCATAAAACGGCTTAAATGTATTTATTTTCGCAATTGGTCTATTTTGGTTCTCTAGATTTGGTACGGTTGCTCGTTGTTGCATCTCTTCGTTATGATGTCCTGCCTAAGTTTCCTTTACAGGATAACCAAGGTCTGTGAGTAGCTTATTGAGTAATTCCCCAGCATATGATAATACATGGGTTTATAACATTGAACTATAACTCGTAAAGCACGCAAAACATGAGCTAAAATAACAACACGAAGTCATGTATTCACAGGCATTACTTTACAGAGTTGATTGTTATATGCCAAGTCGCAAACATGAAACAAAAATGAAACTTTGCCTACAAGTTTTTAAATCTGGTGTTTCATGTGAAATTGATTTAGTATTAATGCAAATTGGACACACTTATTAAAAAGTAGAAGCGTTTAACTTTGAAGTCTGATCTTGTTCAAGTGTTTCTACTAGAACAGTACCTACATGATCTGAAACATGGTCTACTAGGATACACTACTACAATATAGATGAGACTGGTAAGGTATGGCATGGCTATGCCAATACCATGATACATTATCTCTTTACTATTTTAAAAAGAAAAGTTGTGTATAATGGCGAGCTCTACACCCACAAGTACTCTAGAAGATCTTTTCAGGTTAGATATAGTTTGCAAGAACTTTTAAAAAATATAATATTGTAGATCTTCTAAAAATACACTATTATCATGTAGGTTGTTGATCGTTTTTACGTAGTCATGTCTAAAAAATTTTAGATTTATCATTTTCTTAAGTTTAACTTATGGATCTTATACTACATTTTTTTAATGCTAGTTACCTCATACCTGAAATGATTAATCAGTTTTAGTGCATCAGATGAACGAATGCATCACAGTTGAATTCAAGCATAGTTGAAATCATCTGTTTTGAGGAGGGCCAATCGCAAATAGCTTGGATTGAACCAAATCCAAAATTTTACCTTTTCTTTTGCATGCTCCCCTAGTTTGGGAAGCATGAATCTTACCAAGTTGGGCATTGCTTAGATCAATGTCAACCAACAGAAAAAAGAGAAGTAAGCCCATCAGATACTAAACCAGTAAACACTCCATTGACCATTCCATACTGTACATCATTCTATAATTATACACAATAATTATGATTTGTGGTAAAAATTGTTGATAGTGTGGTAGAATGAATTGAAGTGTATTGAACAAATACTGGAAAATTTGTCTCAACGAACTGAATAATAGGTTGTATTTACTGTTTTTTTCCCTTTTAAAAGTAGTTGTTTGACTGGTGTGCTAGTGTTCCAGTGTACAAACTGGATGCTGAACCCAACTAAGCTAGACAAGTTTGATTATGTTGAATGCTTTATCTCAATTTTAAGGAATCCAATATGATACTCTGTTTCATTCTCTGGACATCCATGATCTATATTTTAATTTCTGCTACCCATGTTGTCATTTCAGGAGAATGGTGGGTGATAGACGGCTGTGGAATGCTAAAGAGGATCAAGCGTGGGTCCATGACAGATTTGATGAAATGAATTTACATGATTTCCATAATGACTACGTGAGTATCATATTGTCTTTTTCTGTGTGTTGAACTATTGATTCATCTTTCTTACCAAGATGCTTCTTTTATTGATTGTACTATAGACAAGAAGAAGGCCCAGAGGTCGATTTAGAGGACGTGGTGGTGCACCTGTTGGTAAAGTTCGTGGTGGTAGCCATGATAATTTCAGAGGCAACAGGTCGCAGACATACTATCGTGATGGTGCTAAGAACTACATATACGTTCCGAAAGAACCTCATAGTTACCATGATAACACCAAGAAGGTTCAACAGGTTCTGAATGATAATGGCAAGAATAGAACCATCAAACCACCTAATCCTCGTGATGGCGATGCCAACAATTTCGATTTTGTTCGAAAAGAGTCTCGCCCTCTTTATGGCAATGCCAAAAGTAATAAGAGTGCATCGAGAGTAGTTCGAGGAAGAGGCTCTAAACGTTACCAACCACGTTGGAGGAGTACCGCTGAGATATCTTCAGAGCATAATAATAAGTGAGTGGAAGGTTTCTTCTTATGTGCTATCTGTGTCTTTGTTTTGTTAATATAGAACTTACTGTGGTACTTTTTGTTTTTGTTGCTCATACTTCAGATCACAAAATCTTGAAAACACTTCTTCAAATGCAAACTTGGGAAAACACCAACATCAAGCTTCAAATTCTCAACCAGAACGAGGATTTCCGATGAAGCAGAGCTTTGCATCAAATTTGAATTCAGCTTCACCTCCCTTTTACCCTTCTAGGCCATCTCATCAGGAACTCCCAGTGAGTCAGAGGGGGGATGGACAACCCAGTACCACTACTAGACACTTCTCATCCCCCATTGGTATGGAGCATGTCTCTCCAACCCCACAGTATGGCCCTCTCTTAAGAGGGAAAGCCTTTGTACCGTCTGCTGGGCATGGCAAGTTGCATGCTGAAGTTCCTATAAAGGGCATGGATCATCCTTCATTTCATTCATCTACATCATCATCAACTAGTCAATTTCCTATAGCTACTAATCAGGTCACTGGAAATTCGGCTAAGTCCCCACACCCAATTGTCCAACAAAGGTTGGTTCAATCATTTAATCAATCCACACCAAAGATGCCTGGTCAGATGTTTGCTGCGCAATTTGCTAGCAGTGATAAATTGCCATCTTCCATGCAATCTACATCAACAATTTTGACTGAAGGCACTGAAATTTCTTCACCTCATGGTTCCAACAAATCTAATACTAGATTGATGGCAAAGGGACAACATAGTGACCAGGGAGAAGAACATGCTTCTTTTATGTATGGTGGAGCTCAAGTTCTTGGGACTACAGGATCACTTGGTGACCAAAATTTCCATGGAACCCCTGCACTATTTCCAGGTTCGTATTTTTACTATTCACACGGCAATATAGTAACCAGAGTGTTAAATGAGTAAACGATTACATGGGTGAGGGGAAAAGAAATAATCCAATTTCTAAAGGCTTATTCCTCCATTGATTAGAGGGTGCATGCTATGTGCCTTGAGTGAAAATGTTTACAGTGATGTTAGTGGATTTATAATCTACTTTGAACTTCTGGTTTGATTTCTGAAAAGTAGTGTTATTTTCAGTAGACTGCCACCCCATTGGAGTGAACTGAACCAAGTTTTTGTTTCCAAAACCATTCTGCAATATGCCTTTAGCTTTTTTTTTTTTTCCCATACAGTTATGCAGTTTGGAGGCCAGCATCCAGGTGGGACTGGCGTTCCCTCAATTGGCATGGCTCTACCAGGATTTGTGTCTCAACAACAACTTGGTCTGAGCAATTCTGAAATGACTTGGTAATGACTCTTTGAACTCTTAGAATAGTTGTTTGCTTTATTTTTCTCTACCTCCAATTGGTATGATGTGGTTATCACATTGTACTTCATTTAGATGTTAGCACACTGCTGTTTGCTCAGGCCTAATTTTTTTGTGGGTTGTATCTGAATGAAACTAGGCTACCGATATTGGCTGGTGCTTCTGGAGCTTTGGGAGCAACGTATGGTTCACCTTATATTACTGTAGATGGCAGCTATTATCCCCGAACTTCTGAACATGCATCTTCATCAGTTTCTTTGAGGTATGTTAGTCTAATACTCTAATATGATTCATGTTGCAAGAATTTGGATTTCGCACACAAGGCATATATACTGTTGAGAATTGAGATAATGTTAATTTGATGATGATTCATCCTTTTGTTAAATTCTGGTTCTGAGGTATGATCACCTATTACCAACATGTTGACGACAATAAATAATATGCTATGAACTACTCCCTCCGGGTTGATAATACTTGTCGTTTTGGACAAGGGCACGGTCTCCAAAAAAAACTTTAACCATTATTTTCCATTATAATATGTATAAAAGTGTGAAAAAATATATGATTTTATTAAAGTACTTTTTAAGACTAATCTATACATGTAGTCACCATATTTGAAAGACAAATATTTTAAAAATGATTCATAATCAAATATTCTAAAGTTTGATCTCACCCTTGTCTAAAACGATAAGTATTATCAGCCCGGAGGGAGTAGTAGTTAATGCCCTTACATAGCCCTAATCTGAGGACTTATATTCTATGATTTCCCTCTACCAATGTGCTTGCTTTAGCTGTCTTCCTGTGGGTACTGCCGTACTGGTTGACCAGCCGTATCATCAGAATAGGTTTTGGTAGATAATTGGAGTAACACTACTCTCCTGATCTGGAGAGGTTGATGATTACTTTATTTAGGTTGAATAATAATTGTTTTGCTGCGATTTTTCTGTTTTGTTGTCTTGTGCAACTGCAAGGGGGCAATTTGAATGGCATGGGGATACAATCATTATGCATACACCTAGCATTTTCCTATTATACGTAGTCTAATTGAACAAATGATCGTCATTGATTTCTGTCCCAGCCTTCATCACCAACCACCAACACAACATGCACAAACAGAAAAATGTTAATGAGAATACAAAGGATCCTAGTGCTTCAATCATCCTAGTGCTTTCGATAGTAATGATTCTTTCTGTTTCTTTTACAGAGAACCCAGTGCCTCTTCTCAGTTGAAGTCACAAGAAATAACTGGTAAAGGCATCTTCCATCCCTTTCCATTTATTTTGTCTTCTCAATTGGTATTTATTTTGGGGTATCTTCTCCTATTTTTGCCACATAAATGTACCGAGGCCTTTTCCTCTTTTGCAGAGGCTTTAAATGATGAACTTAGTCAACGCCAACATAAACCTCGGAGGTATGTTAAAGTTTATGTGTTCTGTTTGCTGTATGCTTTCTGTTCTAATACTATGTGTTAATACCATGTTGTGTCTTGTTACAGATATTCGGAAATGAACTTTGGCAAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017668