BGIOSGA017746

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Revision as of 02:24, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017746| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017746, complete gene.| tag = SRP54-2...")
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Gene Name

BGIOSGA017746

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017746, complete gene.

LocusTag

SRP54-2

Ensembl Transcript ID

BGIOSGA017746-TA

Ensembl Protein ID

BGIOSGA017746-PA

Length

2947

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:26699809..26702755

Sequence Coding Region

26702525..26702755,26702301..26702400,26701413..26701566,26701173..26701323,26700930..26701078
,26700666..26700766,26700431..26700588,26700181..26700295,26699809..26700101

Genome Context

<gbrowseImage1> name=IndicaChromosome05:26699809..26702755 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:26699809..26702755 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGCTCGCGCAGCTGGGCGGGAGCATCTCCCGCGCGCTGGCGCAGATGAGCAACGCGACGGTGATCGACGACAAGGCGTTCGCCGACTGCCTCCACGAGATCGCGCGCGCGCTCCTGCAGTCCGACGTGCAGATCAGGATGGTCTCCGACATGCGCGCCAACATCCGGAGGGCCGTCAACCTCGACGCCCTCCCCGCCGGCACCAACAAGCGCCGCATCATACAGCAGGCCGTCTTCGCGGAGCTCTGCAACATGCTTGATCCGGGGAAGCCGTCCTTCACCCCCACCAAGGGGAAGCCCAGTGTGGTCATGTTCGTCGGCTTGCAAGGTTCTGGGAAAACCACTACCTGTACCAAATATGCTCACTATCATCAGCTGAAGGGCTTTAAACCTTCATTGGTTTGTGCTGATACATTCAGAGCTGGTGCCTTTGATCAGTTAAAACAGAATGCTACAAAGGCCAAGATTCCTTACTATGGAAGCTACATGGAATCAGACCCAGTGAAAATTGCTGTTGAGGGTGTGGAGAGGTTCAGGAAGGAGAAGTCTGATCTCATCATTGTTGATACTAGCGGGCGCCACAAGCAAGAGGCTGCACTCTTCGAAGAAATGCGTCAAGTTGCAGAAGCAACGAAACCTGACCTTGTGATATTCGTGATGGATGGTAGCATTGGTCAGGCAGCGTTTGATCAGGCGCAAGCATTTAAACAGAGTGCTTCTGTTGGTGCTGTGATTGTTACGAAATTGGATGGTCATGCCAAAGGAGGCGGTGCACTTAGCGCGGTTGCAGCTACAAAGAGCCCTGTTGTATTTATTGGAACTGGAGAACACATGCAGGATTTTGAGGTTTTCGATGTGAAACCATTTGTTAGTCGTCTGTTAGGAATGGGAGACTTGTCTGGCTTAGTGAACAAGATCAAAGATGCTATGCCTGCTGATCAACAACCTGAGCTTATGCAGAGACTGATAGAAGGAACCTTTACTCTCAGAGTATTCTACGACCTGTTCCAGAATCTTCTTAACATGGGTCCTATTGGACAGGTTTTATCTATGATACCTGGATTTAGGTCTGAACTGATGCCAAAAGGACATGACAAGGAAAGCCAAGCAAAGATTAAGCGGTACATGACTATTATGGATTCTATGACAAATGCAGAGCTTGATAGCACAAACCCAAAGCTGATGAGTGAATCACGAATTAAACGGGTCGCTCGAGGATCTGGCAGGACCATGAAAGATGTGACCGACATGCTGGAAGAGTACAAGAGAATCGCCAAGGTGTGTAGCAAGTTGAAGAAGAAGTTGCCCAAGAATATGGACAGGAATGTTATGAACAACAAGGACACGCTGAACACCATTAACAATCTCATCCCTAAGCAATTGTTGAATCAGATCGGTGGTGTTAATCCGTTGCAGAGCGTCATGAAGCAAATGGGCTTAAAGACATGA</cdnaseq>

Protein Sequence

<aaseq>MVLAQLGGSISRALAQMSNATVIDDKAFADCLHEIARALLQSDVQIRMVSDMRANIRRAVNLDALPAGTNKRRIIQQAVFAELCNMLDPGKPSFTPTKGKPSVVMFVGLQGSGKTTTCTKYAHYHQLKGFKPSLVCADTFRAGAFDQLKQNATKAKIPYYGSYMESDPVKIAVEGVERFRKEKSDLIIVDTSGRHKQEAALFEEMRQVAEATKPDLVIFVMDGSIGQAAFDQAQAFKQSASVGAVIVTKLDGHAKGGGALSAVAATKSPVVFIGTGEHMQDFEVFDVKPFVSRLLGMGDLSGLVNKIKDAMPADQQPELMQRLIEGTFTLRVFYDLFQNLLNMGPIGQVLSMIPGFRSELMPKGHDKESQAKIKRYMTIMDSMTNAELDSTNPKLMSESRIKRVARGSGRTMKDVTDMLEEYKRIAKVCSKLKKKLPKNMDRNVMNNKDTLNTINNLIPKQLLNQIGGVNPLQSVMKQMGLKT</aaseq>

Gene Sequence

<dnaseqindica>1..231#356..455#1190..1343#1433..1583#1678..1826#1990..2090#2168..2325#2461..2575#2655..2947#ATGGTGCTCGCGCAGCTGGGCGGGAGCATCTCCCGCGCGCTGGCGCAGATGAGCAACGCGACGGTGATCGACGACAAGGCGTTCGCCGACTGCCTCCACGAGATCGCGCGCGCGCTCCTGCAGTCCGACGTGCAGATCAGGATGGTCTCCGACATGCGCGCCAACATCCGGAGGGCCGTCAACCTCGACGCCCTCCCCGCCGGCACCAACAAGCGCCGCATCATACAGCAGGTCAGTCAGATATGCAGAGATCCATCCATCGATCCATCGATGAGCTAGCTATAAGCTAGGCTCCCTCGTCAAAATCAGCTGGCAATTGAACGAATTTTGCTGATATATATCGTCTTGTATGTAGGCCGTCTTCGCGGAGCTCTGCAACATGCTTGATCCGGGGAAGCCGTCCTTCACCCCCACCAAGGGGAAGCCCAGTGTGGTCATGTTCGTCGGCTTGCAAGGTAGGCCCGTTCGTCTGTTGGGATTTTCGGCGCACGTGAAATAATAAAACTCATTACCATACGATCGATTAAGTATTAGCTAAACTTGGAAAAATGATTTATTTTTAAAGAAACTTCTACGTATATTTTTTTTAAAAAACACCATTTAGCAGTTTAGGAAATATGCTAACGGAAAACGAGAAAGTTGTTTGTTGTTTGGAGTTGAAGATTAGAACAGGGCCTCCCGTTTTAATTTTACCTAGCACCTGCTAGGTTTTAGTGTTAAACTAGTAGCTATCTGCTGATAGGTTTGTTTGTAACTCCTCTAATTGAATTCTGCTGAATTTATTAGGCCTTTGGTGAGTAAAACTATGTAAAGTTATTTTTTCTTTCTGATGATGATTACTTTTCTCCATGTTGGAAAAGTATCCATAGCCAGACGACAACGGACGATTCTCAATCTTTTTTCCCCTTCTTGTGAATTAATTAATTCTTGAAGTCAACAAACTTCAGATTCTAGTATTACATTGTCAGATAGAGGTCACATCTCAGGGAAATTTGTGGTACCCTGCTGGTTGTAGATGCTAGACCCATTGTCTTAAGGATTAGTGCCATTTCCTCCTTTAAGTTCCTGCTAGTTTTGTTTTGCCTTCTATTGCACCTGCTCCTTAGAATAATCTATTGTCTGCCTCTTTCTTGGGTTGCAATATAAATTTAATGTTCGCTGCTCACTTCATAATGTTATGTTGCTGTAGGTTCTGGGAAAACCACTACCTGTACCAAATATGCTCACTATCATCAGCTGAAGGGCTTTAAACCTTCATTGGTTTGTGCTGATACATTCAGAGCTGGTGCCTTTGATCAGTTAAAACAGAATGCTACAAAGGCCAAGATTCCTTACTATGGAAGGTTGGTTCTCTACATCCACACCTTTACATATTAGTATAAAAAAGTACTTTGCTAAAATTGACATTAAAGAAAACTGTTTGTCATTGCAGCTACATGGAATCAGACCCAGTGAAAATTGCTGTTGAGGGTGTGGAGAGGTTCAGGAAGGAGAAGTCTGATCTCATCATTGTTGATACTAGCGGGCGCCACAAGCAAGAGGCTGCACTCTTCGAAGAAATGCGTCAAGTTGCAGAAGCAACGGTATTTACATTGGCACAACCATTGGCAAAGATCTTTTGATCAAGGCACATTCCACTGTTGTTACTGAGAATTTAACTTGTGTTTCTGTCTGCAGAAACCTGACCTTGTGATATTCGTGATGGATGGTAGCATTGGTCAGGCAGCGTTTGATCAGGCGCAAGCATTTAAACAGAGTGCTTCTGTTGGTGCTGTGATTGTTACGAAATTGGATGGTCATGCCAAAGGAGGCGGTGCACTTAGCGCGTTAGTATTTCCTACATAAACCACCTCCTGCTATTTTATGTTTATTAATTATTAAATTATTACTCTTAGGATTTCTTAATTATAGCAAAAAGGCGGATATCCTTGAGTAAATCAGTGAAAATTTTATAAGGAGCCTGTTTTGACATTTTTTTTTCTTTTCCAGGGTTGCAGCTACAAAGAGCCCTGTTGTATTTATTGGAACTGGAGAACACATGCAGGATTTTGAGGTTTTCGATGTGAAACCATTTGTTAGTCGTCTGTTAGGTTAGTAAAAACATATTGGGTATAATCTGTAACCTTTTGCTATTCTATCGAGCTTACATAACTTCTCTAACTGTCAGGAATGGGAGACTTGTCTGGCTTAGTGAACAAGATCAAAGATGCTATGCCTGCTGATCAACAACCTGAGCTTATGCAGAGACTGATAGAAGGAACCTTTACTCTCAGAGTATTCTACGACCTGTTCCAGAATCTTCTTAACATGGGTCCTATTGGACAGGTTAGATTTATTTTCAGTATTTAATCTTGTTTTTATTGGAGTATTTCATCGAGATATCAACACGGAAAGCCAATGCAACATAAGGAAATCTTTTTTTACGAATTTAATCATGCATTGTGTAATTCTTTCTTGCAGGTTTTATCTATGATACCTGGATTTAGGTCTGAACTGATGCCAAAAGGACATGACAAGGAAAGCCAAGCAAAGATTAAGCGGTACATGACTATTATGGATTCTATGACAAATGCAGGTGAGCTATTATAGGCATTTTTGTTCTTCTTTGAATGGAGATTGCTTTCTTGAAACTTATTTAGCTCCTTAATTTTCAGAGCTTGATAGCACAAACCCAAAGCTGATGAGTGAATCACGAATTAAACGGGTCGCTCGAGGATCTGGCAGGACCATGAAAGATGTGACCGACATGCTGGAAGAGTACAAGAGAATCGCCAAGGTGTGTAGCAAGTTGAAGAAGAAGTTGCCCAAGAATATGGACAGGAATGTTATGAACAACAAGGACACGCTGAACACCATTAACAATCTCATCCCTAAGCAATTGTTGAATCAGATCGGTGGTGTTAATCCGTTGCAGAGCGTCATGAAGCAAATGGGCTTAAAGACATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017746

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA017746&oldid=46502"