BGIOSGA017828

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Revision as of 02:25, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017828| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017828, complete gene.| tag = OS05G04...")
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Gene Name

BGIOSGA017828

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017828, complete gene.

LocusTag

OS05G0488600

Ensembl Transcript ID

BGIOSGA017828-TA

Ensembl Protein ID

BGIOSGA017828-PA

Length

2031

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:25469285..25471315

Sequence Coding Region

25471168..25471315,25471020..25471096,25470882..25470939,25470719..25470806,25470572..25470641
,25469285..25470022

Genome Context

<gbrowseImage1> name=IndicaChromosome05:25469285..25471315 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:25469285..25471315 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCGGCATCTGTTTCTGCATGGAGGAAATACACAAGGAGATTCTGGGCTGGTTCTCTCAACTGACGCTAAACCTAGGTTGAAATGGACACCTGAGTTGCATCAGCGATTTGTAGATGCAGTTAATCAATTAGGTGGAGCAGAGAAAGCTACTCCAAAAACAGTCATGAGGCTCATGGGCATTCCAGGACTCACCTTATACCATCTGAAAAGCCATCTCCAGAAATACAGGCTCAGTAAGAATCTCCAAGGTCAAGCTAATGTTGGGACAACAAAGAATGCCCTTGGATGTACAGGTGTTGCTGATAGGATTCCTGGAACAAGTGCATTAGCGATGGCCAGTGCAAGCGCCATTCCACAGGCAGAGAAAACTATTCAAATCGGTGAAGCACTACAGATGCAAATTGAGGTGCAGAGGCAGCTAAATGAACAACTTGAGGTACAACGGCATCTACAGCTGCGGATAGAAGCCCAAGGGAAGTATCTGCAGGCAGTTCTTGAGCAAGCTCAAGAGACCCTTGGGAAGCAGAACTTGGGCCCTGCAAGCCTGGAAGATGCAAAAATAAAAATATCAGAACTGGTCTCACAAGTTTCAAATGAATGTCTCAGCAACGCAGTTACAGAAATAAGAGAAAGTTCAAGTATACACAGACTAGAGCCAAGGCAAATCCAGTTTGTTGAAAGTTCAGCCAATAACTGTTTGACTGCAGCTGAAGGATTCAAGGAGCATAGGCTACAAAACCACGGGGTACTCAAAGCATATGATGATAGTACATTATTTTGCCGAAAACAGTCCCAAGATCAAGAATCTCAATATTCCCTTAACAGAAGCTTAAGTGAGCGTAGAATGGGTCATCTGTATAGTGGTAAACAGTATCACAAATCAGAGGGAAGTGACAGTGATACAGAGGTTCTACATGAGTATATCACGCCTCAAAAGAATGGCGGAGGCAGCACAACCAGTTCAACATCAGGAAGCAAAGAAATAAATGTAGAGAAGCTATATCTTGATGAACCAAGCTGCAAAAGACAAACAGTTGACTATCAAAGAGAAAGCAAGCTACTAGATTTTGATCAACAAAGTTCAGGGAAGAATCTTGATCTAAATACTCACAATATAGATGATAACGATCAAGGTTATAGACATTTTGACTTGAACGGCTTCAGCTGGAGTTGA</cdnaseq>

Protein Sequence

<aaseq>MERHLFLHGGNTQGDSGLVLSTDAKPRLKWTPELHQRFVDAVNQLGGAEKATPKTVMRLMGIPGLTLYHLKSHLQKYRLSKNLQGQANVGTTKNALGCTGVADRIPGTSALAMASASAIPQAEKTIQIGEALQMQIEVQRQLNEQLEVQRHLQLRIEAQGKYLQAVLEQAQETLGKQNLGPASLEDAKIKISELVSQVSNECLSNAVTEIRESSSIHRLEPRQIQFVESSANNCLTAAEGFKEHRLQNHGVLKAYDDSTLFCRKQSQDQESQYSLNRSLSERRMGHLYSGKQYHKSEGSDSDTEVLHEYITPQKNGGGSTTSSTSGSKEINVEKLYLDEPSCKRQTVDYQRESKLLDFDQQSSGKNLDLNTHNIDDNDQGYRHFDLNGFSWS</aaseq>

Gene Sequence

<dnaseqindica>1..148#220..296#377..434#510..597#675..744#1294..2031#ATGGAGCGGCATCTGTTTCTGCATGGAGGAAATACACAAGGAGATTCTGGGCTGGTTCTCTCAACTGACGCTAAACCTAGGTTGAAATGGACACCTGAGTTGCATCAGCGATTTGTAGATGCAGTTAATCAATTAGGTGGAGCAGAGAGTAAGTATAAGATTCTTATCTTCTCAATGCACTAGAATAGCTGAGTTCTAACATTCATTTTAATCACTCAGAAGCTACTCCAAAAACAGTCATGAGGCTCATGGGCATTCCAGGACTCACCTTATACCATCTGAAAAGCCATCTCCAGGTACCTGACAACCAGGAATCTCCCATTTAAAATAGTACTAAAAAATTTCAGTGCAATTCATAATTTCTTGAATGTTTCAGAAATACAGGCTCAGTAAGAATCTCCAAGGTCAAGCTAATGTTGGGACAACAAAGAATGGTAAAAACAAGTTTAATTTCCATTGTTACCACTACAATAGCCACATAGCAACTCATGGATGATGACAATTTGCAGCCCTTGGATGTACAGGTGTTGCTGATAGGATTCCTGGAACAAGTGCATTAGCGATGGCCAGTGCAAGCGCCATTCCACAGGCAGAGAAGTAAGAAATTTCACATGTACTTTATAATTATAATCCATCTGAATAGTGAAGTAATAGTCCCTTTTATTGGGTGCAAGAACTATTCAAATCGGTGAAGCACTACAGATGCAAATTGAGGTGCAGAGGCAGCTAAATGAACAACTTGAGGTGAGGTACTGACCCTGTTTGCATAATAAGATCTTAACCCACGATAGGCCCATAGAGTAGATGGACATGACATAAGATAAAAAAAAATTCGAGCATCCAGTCAGCATGCCCACATACCAACTAAGAGCATAAGAAAACTGCTATGAATGCTGTATCATCTTTTTTGTATCCTTCACAACAGTGATTCCCACCAGGAATGACCCCCAAGATAACTTTCTCCCTCTAGTAAAAGTTAAGCGATGTTCAGAATACATCCAGCCAAACCTTTAGAATTCGGTACCAGTATCTTTATGAATAAGATTGGACATATGTAATTGATCGGGTAGATCTACCCCAAAAATTCCTTTCATAACACTATTTTCTAACTATATTCTCAAATCATTGTACAATAGAATAGACAGTATTATGTAAAGATTAGAGAACTTGGATACTCTCCTCCAGTTTGGCAGCAAACTATTTTTAGAAAACAGCTAAGATTAATATAATGCATATAGTATCAACAATATGAATTGGCTCAATGGTTCTAACCTGAAGCTAATTTGGTATCAGGTACAACGGCATCTACAGCTGCGGATAGAAGCCCAAGGGAAGTATCTGCAGGCAGTTCTTGAGCAAGCTCAAGAGACCCTTGGGAAGCAGAACTTGGGCCCTGCAAGCCTGGAAGATGCAAAAATAAAAATATCAGAACTGGTCTCACAAGTTTCAAATGAATGTCTCAGCAACGCAGTTACAGAAATAAGAGAAAGTTCAAGTATACACAGACTAGAGCCAAGGCAAATCCAGTTTGTTGAAAGTTCAGCCAATAACTGTTTGACTGCAGCTGAAGGATTCAAGGAGCATAGGCTACAAAACCACGGGGTACTCAAAGCATATGATGATAGTACATTATTTTGCCGAAAACAGTCCCAAGATCAAGAATCTCAATATTCCCTTAACAGAAGCTTAAGTGAGCGTAGAATGGGTCATCTGTATAGTGGTAAACAGTATCACAAATCAGAGGGAAGTGACAGTGATACAGAGGTTCTACATGAGTATATCACGCCTCAAAAGAATGGCGGAGGCAGCACAACCAGTTCAACATCAGGAAGCAAAGAAATAAATGTAGAGAAGCTATATCTTGATGAACCAAGCTGCAAAAGACAAACAGTTGACTATCAAAGAGAAAGCAAGCTACTAGATTTTGATCAACAAAGTTCAGGGAAGAATCTTGATCTAAATACTCACAATATAGATGATAACGATCAAGGTTATAGACATTTTGACTTGAACGGCTTCAGCTGGAGTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017828