BGIOSGA017849

From RiceWiki
Revision as of 02:26, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017849| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017849, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA017849

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017849, complete gene.

LocusTag

OSJNBA0095J22.10

Ensembl Transcript ID

BGIOSGA017849-TA

Ensembl Protein ID

BGIOSGA017849-PA

Length

3792

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:25139407..25143198

Sequence Coding Region

25142998..25143198,25142763..25142842,25142515..25142639,25142302..25142423,25141966..25142205
,25141778..25141852,25141576..25141676,25141400..25141452,25141074..25141268
,25139691..25139769,25139407..25139527

Genome Context

<gbrowseImage1> name=IndicaChromosome05:25139407..25143198 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:25139407..25143198 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGATGGGGAGGTCGGTGCTGGAGATGGTGGTGGCGGCGGCGCAGGGCGGCGGCGGCGCGGCGGGGGAGTCGGTGCTGGGCATGCTCAGGTATGCCGTGCTGCCCATCGCCAAGGTGTTCGTCGTCTGCTTCATGGGGTTCCTCATGGCGTCCAAGCGCGTCGGCGTGCTCAAGCCCAGCGGCCGCAAGCTTCTCAATGCGCTGGTGTTCTCTCTGCTCCTTCCTTGCCTAATATTTGCGCAGCTCGGGAGATCAATCACAATTGACAAGATCATGGAGTGGTGGTTCATTCCAGCAAACATTGCTCTGGGTGCAGTCTCTGCATCTTTGGTTGGACTTATAGTGGCATTGATTGTACGGCCGCCTTATCCATACTTCAAGTTCACCATCACTCACATTGGAATAGGGAACATTGGAAATATACCACTTGTCCTTATCTCGGCATTATGTCGCGACCAATTAAATCCGTTTGGTGACTCGAACAAATGTACTCAAGATGGAAATGCATACTTATCATTTGGTCAATGGGTTGGTGCCATTATTGTTTACACATATGTGTTCAAGATGCTTGCTCCACCCCCCGGGCAGACCTTTGACAGCTGCGATGAGGAGAGAGATAAACTTCCAATTAAGGCTCCTAATACCATGTCAAGTGTAGCGAAATATCCATCAAGTGCTCATGGCAATACACATGAGGAAGAGCCCCTGCTATCTATAGAGGAGGAGGAGGAGGAGGAGGGGCAGGACGTTCATTCTTTAGGTTCAAAAATAATGATTCCTATCAAGGGCATGGTTAGATTCCTACAAAAGAAGCAGCTCCTCCAACCACCAATCATTGCATCTGTTCTTGCAATTACTCTCGGTGTTGTGCCATTCTTGAAGAATTTGATCCTCACAGATGACGCACCTCTATTCTTTTTAACAGATAGCTGTCTCATTCTTGGGGAAGCTATGATTCCGTGCATTTTGCTTGCCGTTGGTGGCAATCTTGTTGACGGCCCTGGTGAAGGAAGTAGGAGACTTGGGGTTCGGACCACCGTCGCGATTATATTTGCACGCTTGATATTGGTTCCAATTGCTGGTATTGGCATCGTCTCATTTGCTGACAAGCTTGGATTTATTCCAAAAGGAGACAAGATGTTCAAGTTCGTCCTGTTACTGCAGCACTCTATGCCCACATCGGTACTATCAGGAGTATACCTATTACTATCTTCGAGCTCGCTTGCTTCTTTCTCGATGTCAAATCTTGATGACTGGCAGCCAGCTGAGTGTATATACCATAATGCTCAAGCTGACCTTGTGAACTATGCCAGATATAGCGACCAGTCGACTCTTTACTTGCCTAGCACGCTCAAGATTGAGCATGCTGACTTCAGAGGTGAGCTCATCTAA</cdnaseq>

Protein Sequence

<aaseq>MMGRSVLEMVVAAAQGGGGAAGESVLGMLRYAVLPIAKVFVVCFMGFLMASKRVGVLKPSGRKLLNALVFSLLLPCLIFAQLGRSITIDKIMEWWFIPANIALGAVSASLVGLIVALIVRPPYPYFKFTITHIGIGNIGNIPLVLISALCRDQLNPFGDSNKCTQDGNAYLSFGQWVGAIIVYTYVFKMLAPPPGQTFDSCDEERDKLPIKAPNTMSSVAKYPSSAHGNTHEEEPLLSIEEEEEEEGQDVHSLGSKIMIPIKGMVRFLQKKQLLQPPIIASVLAITLGVVPFLKNLILTDDAPLFFLTDSCLILGEAMIPCILLAVGGNLVDGPGEGSRRLGVRTTVAIIFARLILVPIAGIGIVSFADKLGFIPKGDKMFKFVLLLQHSMPTSVLSGVYLLLSSSSLASFSMSNLDDWQPAECIYHNAQADLVNYARYSDQSTLYLPSTLKIEHADFRGELI</aaseq>

Gene Sequence

<dnaseqindica>1..201#357..436#560..684#776..897#994..1233#1347..1421#1523..1623#1747..1799#1931..2125#3430..3508#3672..3792#ATGATGGGGAGGTCGGTGCTGGAGATGGTGGTGGCGGCGGCGCAGGGCGGCGGCGGCGCGGCGGGGGAGTCGGTGCTGGGCATGCTCAGGTATGCCGTGCTGCCCATCGCCAAGGTGTTCGTCGTCTGCTTCATGGGGTTCCTCATGGCGTCCAAGCGCGTCGGCGTGCTCAAGCCCAGCGGCCGCAAGCTTCTCAATGCGGTAAGGCGCCTAATTCAGTAGTTCTCACAACCATCATGGTGGCTCGCTAATTTTCAGAATATAATGGAATTCAGACTAGCTATGGGAACATCAGCAGAATTCAGGCTAGCTATGTTGATTTATCTTATCTTTTTTTTTTTTTGTTATTTTTGCAGCTGGTGTTCTCTCTGCTCCTTCCTTGCCTAATATTTGCGCAGCTCGGGAGATCAATCACAATTGACAAGATCATGGAGTGGTAAGAAAGAACATATTAGAACTCATTTAGATGATTAGCCACAAGTTGTATCTTTCCCTTGGCGATATTTGGGGTCTTCTTGTGTCAAAGCATTTCAACATTACTCATGATGTTGCATTGCAGGTGGTTCATTCCAGCAAACATTGCTCTGGGTGCAGTCTCTGCATCTTTGGTTGGACTTATAGTGGCATTGATTGTACGGCCGCCTTATCCATACTTCAAGTTCACCATCACTCACATTGGAATAGGTTTGTACATTCCTCACGCCCTTATGAATATCGCTAGCTTCTGATTCATCACGCATTCTGCATTATATTTTTAACATTTCACTTAATGCAGGGAACATTGGAAATATACCACTTGTCCTTATCTCGGCATTATGTCGCGACCAATTAAATCCGTTTGGTGACTCGAACAAATGTACTCAAGATGGAAATGCATACTTATCATTTGGTCAATGGGTATGTCCAAATCCGTTTGTTTATGGAGTTGCACGTCCCTTTTTAAAATGCTACTCCAAATACTTATCATATCTATTGGATTGTTTACCGGTGCAGGTTGGTGCCATTATTGTTTACACATATGTGTTCAAGATGCTTGCTCCACCCCCCGGGCAGACCTTTGACAGCTGCGATGAGGAGAGAGATAAACTTCCAATTAAGGCTCCTAATACCATGTCAAGTGTAGCGAAATATCCATCAAGTGCTCATGGCAATACACATGAGGAAGAGCCCCTGCTATCTATAGAGGAGGAGGAGGAGGAGGAGGGGCAGGACGTTCATTCTTTAGGTTCAAAAGTAAGAAGTGGGCACAACATAATGCTAGTTCAGCATATTGGAAAAAAAAATAGAGGCACTTCAGTAGTTGTTACCAAAATAACTAATAATACTCCATTTATGGCTTAATGCAGATAATGATTCCTATCAAGGGCATGGTTAGATTCCTACAAAAGAAGCAGCTCCTCCAACCACCAATCATTGCATCTGTAAGTGCTCGGTATATTTGGTTTTTGTCTCTTATCACTGCCGTAAAACAATACTTGCATTTTTCTCAATTATCTGAATGTTCCTTTGCGTCATGTAACAGGTTCTTGCAATTACTCTCGGTGTTGTGCCATTCTTGAAGAATTTGATCCTCACAGATGACGCACCTCTATTCTTTTTAACAGATAGCTGTCTCATTCTTGGGTATTGACCTGTCTCATGACTTGTAGTTTCTTCTTGCAATATGCCTATAGTGTCTTGTAATAACAAATATGATTCGCATTTAAAAACCATCTCTTGCTAACAATGCTGTTTTATATATTTCAGGGAAGCTATGATTCCGTGCATTTTGCTTGCCGTTGGTGGCAATCTTGTTGACGGTAAGCTCATCTTGTATTCTCAAATCTCATTAGAACCGTGCTGCAATATGAAGTGTGCTTTTAGTACATTTATACTTCTGCAATTTATATGTTTATCTGAAGTCCATACTTGTGGTTTATTATGGTTTTAGGCCCTGGTGAAGGAAGTAGGAGACTTGGGGTTCGGACCACCGTCGCGATTATATTTGCACGCTTGATATTGGTTCCAATTGCTGGTATTGGCATCGTCTCATTTGCTGACAAGCTTGGATTTATTCCAAAAGGAGACAAGATGTTCAAGTTCGTCCTGTTACTGCAGCACTCTATGCCCACATCGGTACTATCAGGTACGAAAAAGTATAAGGATGACTGAGACATCATATTTGGCATGTTAATCAACCTTAGAGTATAATACAGTTGCAATACTAATCTGCTATTTTTTATGGGCAGGTGCTGTTGCAAACCTAAGAGGTTGTGGCAAGGAATCAGCTGCAATCTTGTTCTGGGTGCACATTTTTGCTGTCTTCTCCATGGCAGGATGGATTATCTTATATCTTACCATGCTGTTCTAGGTATTTGATTTTGAGCCCCCTCTGTGTGTGTGTGCCTGAATATGATGCTCCTCCTGGGTTAGCTGCTGTCGGCAGTACTGTGTCTGGTTGTACATTTTTCCGCTGTCCCTCGAGTTATTGTAGTTTATAATGTTTCATCTGATTCTTTTGTAGATACTAACTGCACTATGACATAATATGATATGTTCATGAAATACATGTTGCTGCAAAGTGCAAGGTGATTGGAAGTGCGACCCTGTTGGATCTGCGGGTTGCATTTTCCGGGCCGTGGACAATTGCGAGAGGCCTGCTATTGTATGTTTTGTTTGGTTAGCTGCTGAAAACAATAGATGAGGCAAAGGAATTGTGTCAGCACCTCTTGTACATTTGATCGTAAAATACAGGATATCTCCAACTAATAGAGAGCCTTGTATCCCCAAATTCTTGCTTTTGGTTAAGTAGGACCAGTAGATTGAAGTGCATTATGTAAGAGGAGATTTTTTTTTTCTAGAGAAGCGTACTGTGAATTTGAAATCCATGGCATATTTCTACAGAGGATAGCATGAAAGCACGTGGAAAAAACAAATAATCAACAGACGATAAGATAATTTGGACTAGGGAATAGGGATTGTCTACCCAACATTCGAATGTTGTTTAGGGCCACCTCGGTCAAGAATGGCTGGATTCTTCTTTGCCAAAACATTCGCATGTTCTTTTTGGCCCACAAAGCCGAATACACAACTCAACAACACAACATACACAGCCCAGGCGAGAAAAACAACATTTTTTTTTCAGGAATAATGCTTCAAAACTAATGCCACTCCAATTTTAATGTTCTCGAGCAATGCATCTATCTTTACATTGTTATCAGTAAGTAAAAGGGTGAGATGCTTGACTGAATATTGTAGGTAAAAATATAAAATGAAGGCTTATACTCCGTATGCTATCATCCCAAGAAAACATGAAAATTGTGGAAGCATGTTTGCAACTTATCAACATCGTCCTCCCTGGCGCTGCATTCAGGCACACGTCATGTCCATGGTTGGATGAAGCACCAACTTATCAACTTGTGGAAGATTTTTTTTTTTTTTGTCTTGTAGGAGTATACCTATTACTATCTTCGAGCTCGCTTGCTTCTTTCTCGATGTCAAATCTTGATGACTGGCAGCCAGCTGAGTGGTAAGCGAGCTTTGTCATGTCGATGTCGTCATCTAGCTAGCACTGTAGTTCATCCCTGACCTGTCAAACGATTCATGGAAATAGCACTCGGACACTTCAGAATTACTCACAAAGTCACAATAAACCATATCATCATTGTATAAATGTTCACATATACTTGTAGTATATACCATAATGCTCAAGCTGACCTTGTGAACTATGCCAGATATAGCGACCAGTCGACTCTTTACTTGCCTAGCACGCTCAAGATTGAGCATGCTGACTTCAGAGGTGAGCTCATCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017849