BGIOSGA018001

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Revision as of 02:28, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018001| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018001, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA018001

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018001, complete gene.

LocusTag

OSJNBB0048I21.12

Ensembl Transcript ID

BGIOSGA018001-TA

Ensembl Protein ID

BGIOSGA018001-PA

Length

2461

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:22436460..22438920

Sequence Coding Region

22438780..22438920,22438327..22438473,22438093..22438209,22437871..22438014,22437685..22437771
,22437174..22437289,22436859..22437040,22436666..22436723,22436460..22436583

Genome Context

<gbrowseImage1> name=IndicaChromosome05:22436460..22438920 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:22436460..22438920 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCAGCCGCTTCCTTGGCTCCGCCCACCGCCTCCTTCTCGCCGGCGCCGGCGCCGGGGAGGGTTAAGGCGGCGGCGCCTTTGCTCTCCAGGAGGCCTCCCGGGCGGTTCCTTCTCAGGGTGGCTAGCGAATCCTCCTCGATTTCTGGTGACACGCTGCTGGGATTGTATGAGAAAGAGAGGTTAAGCCACTCGCTATATGCTAACGAAGATTACGACAAAGAGATGTTCTGGGAAAACTTGGATGCGGATTTGCGCTACTGGACCAGATCCCTGCGCCCAGTGCAGTGGTATCCTGGTCATATTGCGAAAACGGAGAAGGAACTGAAAGAACAGCTAAAGCTTATGGATGTTGTCATAGAGGTCCGCGACGCAAGGATTCCCTTGGCAACCAGCCATCCTAAGATGGATGCCTGGCTAGGCAATCGGAAAAGGATCATAGTCATGAATCGCGAAGACATGGTGTCAAATGAGGACAGAAATGCATGGGCCTCTTACTTTGCTAATCAGGGTACCAAAGTTGTTTACTCAAACGGGCAGCTGGGCATGGGTACAATGAAATTAGGTAGGATGGCAAAATCACTAGCATCTACTGTGAACACAAAGCGCAGAGAGAAGGGGTTACTTCCTCGTGCGGTTCGAGCTGGAATAGTTGGATATCCAAATGTTGGCAAATCTTCCTTAATTAATCGCTTGCTAAAACGAAGAATGTGTCCAGCAGCGCCTAGACCAGGTGTTACAAGAGAGCTGAAGTGGGTTCGTTTTGGAAGTGATTTAGAGCTATTAGATTCACCTGGCATTTTGCCAATGCGAATAAGTGACCAGACAGCTGCAATCAAACTTGCTATATGTGATGATATAGGAGAAAGGTCGTATGACTTTGCTGATGTGGCAGCGATTCTCGTACAGTTATTAGTGAGACATCCAGCTGTAGGCCCTGAAGCGTTTCGAAGACGCTATAGGCTTGACATGGACAGCGATTGTGGTAAAATGTTTGTGACAAAGCTCTCTGTTCACTTGTTCAATGGAGATGCCAGCCAAGCAGCCTTCCGCATCTTGTCTGACTACCGGAAAGGCAAATTTGGCTGCGTGGCCCTGGAGAGACCCCCAACATGA</cdnaseq>

Protein Sequence

<aaseq>MAAASLAPPTASFSPAPAPGRVKAAAPLLSRRPPGRFLLRVASESSSISGDTLLGLYEKERLSHSLYANEDYDKEMFWENLDADLRYWTRSLRPVQWYPGHIAKTEKELKEQLKLMDVVIEVRDARIPLATSHPKMDAWLGNRKRIIVMNREDMVSNEDRNAWASYFANQGTKVVYSNGQLGMGTMKLGRMAKSLASTVNTKRREKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELKWVRFGSDLELLDSPGILPMRISDQTAAIKLAICDDIGERSYDFADVAAILVQLLVRHPAVGPEAFRRRYRLDMDSDCGKMFVTKLSVHLFNGDASQAAFRILSDYRKGKFGCVALERPPT</aaseq>

Gene Sequence

<dnaseqindica>1..141#448..594#712..828#907..1050#1150..1236#1632..1747#1881..2062#2198..2255#2338..2461#ATGGCAGCCGCTTCCTTGGCTCCGCCCACCGCCTCCTTCTCGCCGGCGCCGGCGCCGGGGAGGGTTAAGGCGGCGGCGCCTTTGCTCTCCAGGAGGCCTCCCGGGCGGTTCCTTCTCAGGGTGGCTAGCGAATCCTCCTCGGTTCGTAGACCACTCCAAGCTCCCGATTGTTTTACAACCGCTGTTTCCAGTGGTTCTTGTCTTGTTTCTGGTTTCCACTCTGCTGCGTGGATTTGGTTCCTGTGCCGGCATTGGGGTTGGTTCGATATCTACTGTGTGGATAAATCCCTAGCTCTGGGGTCCGGGGTCTTGTCCCGCTTCCATTTACCCTTTCTTTTACTAATTTGCGTCTGTTTATGGCAATTCTTGGTTTGGAGCAAAGCTCATTTGTGAGTAGTACCATCCTGACATTTCGCTGCTTTGATCGTCTTATGCTTGTATGATTAGATTTCTGGTGACACGCTGCTGGGATTGTATGAGAAAGAGAGGTTAAGCCACTCGCTATATGCTAACGAAGATTACGACAAAGAGATGTTCTGGGAAAACTTGGATGCGGATTTGCGCTACTGGACCAGATCCCTGCGCCCAGTGCAGGTATATATAAGGTGTGCTTTAGTGGAATTTAACAAGCATATGTGCGGAATCTTGTACTAGCTCTAATGTTTAATATATGCTCTCACTTTTTTCTCCATTTTTTTTGCTACCATTCAGTGGTATCCTGGTCATATTGCGAAAACGGAGAAGGAACTGAAAGAACAGCTAAAGCTTATGGATGTTGTCATAGAGGTCCGCGACGCAAGGATTCCCTTGGCAACCAGCCATCCTAAGGTTATGGTTTGCTCTTGTTTATGTCTGTGAAATGGGTGACATGGGATGGTGCTGATGAGTGTTGTTTCGTATGATCAGATGGATGCCTGGCTAGGCAATCGGAAAAGGATCATAGTCATGAATCGCGAAGACATGGTGTCAAATGAGGACAGAAATGCATGGGCCTCTTACTTTGCTAATCAGGGTACCAAAGTTGTTTACTCAAACGGGCAGCTGGGCATGGTAAGATAACCCTTATGTAGCTTTTGTTGTCCATTGGCCAGGTCGGTTCTGGATTATGACATGATATATATTGCTTTCTCCGATTTATTTCTTGGTCAGGGTACAATGAAATTAGGTAGGATGGCAAAATCACTAGCATCTACTGTGAACACAAAGCGCAGAGAGAAGGGGTTACTTCCTCGTGCGGTACTTCGTTTAGTTCCTTGTTATGTCTTGTATTGCTTCATTTCGTTTTGTTGTTTCATGTGTGCAAATTAGCTTGATCTGGAAATATTTCTAAAACAATGCATTCTTCAACTTGCTTGTGATACCACAGACATAATGTTTGCATGTGTTCTTTTTGAATGATTAATATAAAATTCTAATTTTCTGATAAATTTTAATTGAATCAGGCAGTTGGTAGCACATCGGCTTCCTGAAATGAATGGTTCAGTAGCAGTATGTTGGTGCTTTCTGTTATAATACATATTTTTCAACAATTGCATAAAATCCAAAACAAAAAAAAATGATAATTTTTGTTAAGTGATCACGTACAACTTGTTTATTTTGTTTTGTTGTTTATAAGTTTCCCTTGTATGAAGGTTCGAGCTGGAATAGTTGGATATCCAAATGTTGGCAAATCTTCCTTAATTAATCGCTTGCTAAAACGAAGAATGTGTCCAGCAGCGCCTAGACCAGGTGTTACAAGAGAGCTGAAGTAAGCTACTCAGTTGCATAGATGTATATAATTCTTAGTTTCTTTTTTTGCAGAAATTCAATATTATATAAATGTCCATCCTGCAAATAATATGGTTCCAGTTCTACATTTCTGACATTAGAATTACTAACAGGTGGGTTCGTTTTGGAAGTGATTTAGAGCTATTAGATTCACCTGGCATTTTGCCAATGCGAATAAGTGACCAGACAGCTGCAATCAAACTTGCTATATGTGATGATATAGGAGAAAGGTCGTATGACTTTGCTGATGTGGCAGCGATTCTCGTACAGTTATTAGTGAGACATCCAGCTGTAGGTCAGTGCTCTGACAAGCTAATGACTCCTGTGCATATATGTTTTGATTATAATGCATTCTAAAGATCATTGTTTAGTTTCAAAGAACAAAAGTATGTCATCATGATATATATTTTTCTGAATGGCTCTGACACAGGCCCTGAAGCGTTTCGAAGACGCTATAGGCTTGACATGGACAGCGATTGTGGTAAAATGTACGGTTCAATCCTCTTCTAGTTTTTTCAATGATATTAGAAGTTGGGACAATATTCTGATGGAATGCTTGACAAGTTTCAGGTTTGTGACAAAGCTCTCTGTTCACTTGTTCAATGGAGATGCCAGCCAAGCAGCCTTCCGCATCTTGTCTGACTACCGGAAAGGCAAATTTGGCTGCGTGGCCCTGGAGAGACCCCCAACATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018001

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA018001&oldid=46757"