BGIOSGA018031

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Revision as of 02:29, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018031| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018031, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA018031

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018031, complete gene.

LocusTag

OSJNBB0092E21.14

Ensembl Transcript ID

BGIOSGA018031-TA

Ensembl Protein ID

BGIOSGA018031-PA

Length

3756

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:21941959..21945714

Sequence Coding Region

21944088..21945714,21943457..21943512,21943065..21943340,21942587..21942823,21942334..21942453
,21942083..21942211,21941959..21941988

Genome Context

<gbrowseImage1> name=IndicaChromosome05:21941959..21945714 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:21941959..21945714 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGGCACCGCATCGCCACCGCCGGACGCGGAGCCTCCCGAGTGCCCGGTGTGCCTCTCCCCCTTCGACGCCGCCTCCGCCGCGCCGCGGGTCCTCCCGTGCGGCCACTCCCTCTGCGGCCCCTGCATCGCCTCCCTCCCGCCGGCCTCCGCCTCCGCCTCCGCCTCCGCCGCCTCGCTCCGCTGCCCTCTCTGCTCCCAGTGCGTCCCTTTCTCCCGCGCTCTCGGGCCCTCCTCCCTCCCCAAAAACCTCGCCCTCATCTCCCTCCTCCCCTCGCCCCCAAACCCCTCTCGTTCTCGCACCGCCGCCGCGGCGCCGCCGCCTCCTCATGTCCCGCTCCACGCGGACCACTCGCGTCTCCTCTCCCGCTTCCGCCACGCCGTCCTCCCGGAGTCCGCTTCGCCGCTCCACTCGCCCGCTCCCGCCGCGGGCCTCGCCATCGGGTCCTTCGCTTCCGACCTCGGCGCCCCGTGGTTCTGCCCGCGTGGCCACCCCGTAAGCCTCCTCCCGATCGAAACCCCCGCAGCCGCCGCCAAGCAGGAGTCCCCGTTGTACTACCGGCCCAGCCACGCGGCGCGGGTGGCCGCCGCGATCGATGCGCTGAGCGCCGCGGCGAGGGATGAAGTGATCGATTTGGTGGCCGTCTCGTCGCGGTTGGCGCGGCGGGTTTGCAGGGTTTACGGCTTCTGGATGGGCCCCGAGGCGGCTCCGCTGTGGCTGCTCTCCGAGCGGCATTCCCGCGGAGTCTCCTGCTTGTTGGAGGAGAGGAGCCGACGAGAGGAGACGGTGGCTCTGATCAGAAATGTCGGAATGGAGGTCTGTGAAGCGTTCATGGGATTGCACGGAGAGGGGCTGGTACTGGGGTGCATAGGGCTAGGATGCTTCTGCCTCGATCGCTTTGGACACTGCCTGCTCGACCTGAATCAGGTTTTGGCCTTGTGCCACGGGGTTCGGGTAGGGGTTTGCTCATCCAAGTCCAAGGCCTTCATGGCTCCTGAGGTGGCAGAGGTGGTGCATGACAAGTTGCAGATAAAGGATCATGATTTCAGTGGCTTGTTAGGGCCTAGTTCAGATGCTTGGTTGCTTGGTTGTTTATTGGTGGCACTTGTAACTGGGGATGAGCAGCTTGCAGCAGGATGGAGTACTGAGGGGTCATACGATGATTGGAAGAATGAAGTGCTTACGAAGGTTGATGCTTCATTGGTTGGCACACATATGGAACCATGGTCTGCAACCATGGTGTCATGTTTGAACTATGATCCAGAAGGCCGTCCAGAAATTGCTGATGTCTGGAAATGTATTAACGGCTCATTGATGAATTCCGACATTGAAGCTTTGATTCCTAATGTTGATCTTGCAGCTCGAAAGAGTTTTATGTGTTTGCTCCTTGGGGAGTTGTCCTCAATGTGCTCTAACCTTGATGCTGTTGAGTCAGATGATACAATGCATCTTTCTCAGGATTTGGATGACAAACATTCAACTCCAGATGATGCAAGCAGTGGTGGTATTATAAACAACGAAGAAGTTGGTGCAGCTGGAATGGATGGGCCAAAATGTGGACTGTACAATTCTTCAACTCTGCTTGCTCACCGTGACTGTATTACGGGATTAGCCATTGGAGGAGGCTTTTTGTTTAGCTCTTCTTACGACAAGACAATCAATGTATGGTCACTGCAGGACTTCTCTCATAAACAAAGTTTGAAGGGCCATGAACACAAAATCACAGCAATTGTTGTTGTTGACAATGATAATCAGTCACTTTGTATAAGTGGAGACAGTGGTAGCGGAATATTTGTCTGGTGTGTTGATCCTTCACTCAGTAATGAACCATTGAATAAGTGGTATGAAAGTAATGATTGGATTTATCGAGGTGTTCACTGTTTGGCTGTTTCTGGAACTGGTTATCTTTACACTGGTAGTAGAGACAAATCTATTAAGGCTTGGTCTCTAGAGGATTATTCACTACGCTGCACAATGACAGGTCACAAATCAACTGTTTCTTGCCTTGCGGTTGCCTGTGGTATTCTTTACAGTGGAAGTTGGGATGGTTCTATTAGATCATGGTGGCTCACTGATCACAGCCCGCTGTCTGTACTGGAAGATGGTACACCAGGAAGCATTACTCCTGTGCTGTCAATTTCAACAGAACTCGATTTTGTTGTTGCATCATATGAAAATGGCTGTTTGAAGATCTGGAAGGATGATGTCCTAGTAAAGTCAGAGAAACTTCAAAACGGTGCTATATATGCTGCTAAATTGAATGACAAGTGGCTCTATGCTGGTGGATGGGATAAAGTTGTAAATATTCAGGAGTTATTGGAAGATGATTCAGAGGTGGAAATCAGAGATGTTGCTACCTTTACTTGTGATTCAATTATAACTTCAATACTGTACTGGGATGGAAGGCTGATAGTTGGACTTTCTAACAGGGAGATTAAGTTCTACCTTAATTTATCTTTGGTTAAATAA</cdnaseq>

Protein Sequence

<aaseq>MAAGTASPPPDAEPPECPVCLSPFDAASAAPRVLPCGHSLCGPCIASLPPASASASASAASLRCPLCSQCVPFSRALGPSSLPKNLALISLLPSPPNPSRSRTAAAAPPPPHVPLHADHSRLLSRFRHAVLPESASPLHSPAPAAGLAIGSFASDLGAPWFCPRGHPVSLLPIETPAAAAKQESPLYYRPSHAARVAAAIDALSAAARDEVIDLVAVSSRLARRVCRVYGFWMGPEAAPLWLLSERHSRGVSCLLEERSRREETVALIRNVGMEVCEAFMGLHGEGLVLGCIGLGCFCLDRFGHCLLDLNQVLALCHGVRVGVCSSKSKAFMAPEVAEVVHDKLQIKDHDFSGLLGPSSDAWLLGCLLVALVTGDEQLAAGWSTEGSYDDWKNEVLTKVDASLVGTHMEPWSATMVSCLNYDPEGRPEIADVWKCINGSLMNSDIEALIPNVDLAARKSFMCLLLGELSSMCSNLDAVESDDTMHLSQDLDDKHSTPDDASSGGIINNEEVGAAGMDGPKCGLYNSSTLLAHRDCITGLAIGGGFLFSSSYDKTINVWSLQDFSHKQSLKGHEHKITAIVVVDNDNQSLCISGDSGSGIFVWCVDPSLSNEPLNKWYESNDWIYRGVHCLAVSGTGYLYTGSRDKSIKAWSLEDYSLRCTMTGHKSTVSCLAVACGILYSGSWDGSIRSWWLTDHSPLSVLEDGTPGSITPVLSISTELDFVVASYENGCLKIWKDDVLVKSEKLQNGAIYAAKLNDKWLYAGGWDKVVNIQELLEDDSEVEIRDVATFTCDSIITSILYWDGRLIVGLSNREIKFYLNLSLVK</aaseq>

Gene Sequence

<dnaseqindica>1..1627#2203..2258#2375..2650#2892..3128#3262..3381#3504..3632#3727..3756#ATGGCGGCGGGCACCGCATCGCCACCGCCGGACGCGGAGCCTCCCGAGTGCCCGGTGTGCCTCTCCCCCTTCGACGCCGCCTCCGCCGCGCCGCGGGTCCTCCCGTGCGGCCACTCCCTCTGCGGCCCCTGCATCGCCTCCCTCCCGCCGGCCTCCGCCTCCGCCTCCGCCTCCGCCGCCTCGCTCCGCTGCCCTCTCTGCTCCCAGTGCGTCCCTTTCTCCCGCGCTCTCGGGCCCTCCTCCCTCCCCAAAAACCTCGCCCTCATCTCCCTCCTCCCCTCGCCCCCAAACCCCTCTCGTTCTCGCACCGCCGCCGCGGCGCCGCCGCCTCCTCATGTCCCGCTCCACGCGGACCACTCGCGTCTCCTCTCCCGCTTCCGCCACGCCGTCCTCCCGGAGTCCGCTTCGCCGCTCCACTCGCCCGCTCCCGCCGCGGGCCTCGCCATCGGGTCCTTCGCTTCCGACCTCGGCGCCCCGTGGTTCTGCCCGCGTGGCCACCCCGTAAGCCTCCTCCCGATCGAAACCCCCGCAGCCGCCGCCAAGCAGGAGTCCCCGTTGTACTACCGGCCCAGCCACGCGGCGCGGGTGGCCGCCGCGATCGATGCGCTGAGCGCCGCGGCGAGGGATGAAGTGATCGATTTGGTGGCCGTCTCGTCGCGGTTGGCGCGGCGGGTTTGCAGGGTTTACGGCTTCTGGATGGGCCCCGAGGCGGCTCCGCTGTGGCTGCTCTCCGAGCGGCATTCCCGCGGAGTCTCCTGCTTGTTGGAGGAGAGGAGCCGACGAGAGGAGACGGTGGCTCTGATCAGAAATGTCGGAATGGAGGTCTGTGAAGCGTTCATGGGATTGCACGGAGAGGGGCTGGTACTGGGGTGCATAGGGCTAGGATGCTTCTGCCTCGATCGCTTTGGACACTGCCTGCTCGACCTGAATCAGGTTTTGGCCTTGTGCCACGGGGTTCGGGTAGGGGTTTGCTCATCCAAGTCCAAGGCCTTCATGGCTCCTGAGGTGGCAGAGGTGGTGCATGACAAGTTGCAGATAAAGGATCATGATTTCAGTGGCTTGTTAGGGCCTAGTTCAGATGCTTGGTTGCTTGGTTGTTTATTGGTGGCACTTGTAACTGGGGATGAGCAGCTTGCAGCAGGATGGAGTACTGAGGGGTCATACGATGATTGGAAGAATGAAGTGCTTACGAAGGTTGATGCTTCATTGGTTGGCACACATATGGAACCATGGTCTGCAACCATGGTGTCATGTTTGAACTATGATCCAGAAGGCCGTCCAGAAATTGCTGATGTCTGGAAATGTATTAACGGCTCATTGATGAATTCCGACATTGAAGCTTTGATTCCTAATGTTGATCTTGCAGCTCGAAAGAGTTTTATGTGTTTGCTCCTTGGGGAGTTGTCCTCAATGTGCTCTAACCTTGATGCTGTTGAGTCAGATGATACAATGCATCTTTCTCAGGATTTGGATGACAAACATTCAACTCCAGATGATGCAAGCAGTGGTGGTATTATAAACAACGAAGAAGTTGGTGCAGCTGGAATGGATGGGCCAAAATGTGGACTGTACAATTCTTCAACTCTGCTTGCTCACCGTGACTGTATTACGGGATTAGCCATTGGAGGTATAACATATTGGAGTATTTACAACTTTAATTATTTAAGGCATATATAGTGCAAACCAGCAACTAGGTTCTACATTGAAACTATTGATTTGGACACCATTGCTATCTGGATAGTTTTAAAACGAAATATTAATGTCATCTACCTAGTGTTTAGATCCTTTGACAATTTCATGTTCAACATTAAAGTGTGTTATGAGATACATATGAACATGCAAAAAGGAGAAGATTTTGAATAACTCTGTTTTCGTTTTGTTTCATTTCATTCTAGTTTATCATTTATCATAGGTTTCTCATGTCAAACTTGTCAATGAAGGTAACATAAATTATAACTTGGAGGTTTTTATGTTAATTTGATGTTAAGTAAATGTTTTGAAATCTTGCAGGTAACCGTTAGTTTGCACTAGATTTTTGATTTCATTGTTGGCATCCTTGCTAGAGTATCCGATTCTTTCATCTGTGGTGTTATTCTATGGTCATGACACATCTTATTATGCTAGTGGATATTTTTAATGTTATGCACTTAACAAGAACTGCCACTCAAGGACTTCCCAATAATAGATCTTCATTGACTGCAGGAGGCTTTTTGTTTAGCTCTTCTTACGACAAGACAATCAATGTATGGTCACTGCAGGTATCTTCTCTCCTCTTCTCTTTCTTGTCAGTTCTGTTAGTATCATTTCTATCTCCTCTTTAGTTTTCCGTGGCTCATTTTTCTGACTTCTATTGGTCCTTGGGTTCTTTCTACAGGACTTCTCTCATAAACAAAGTTTGAAGGGCCATGAACACAAAATCACAGCAATTGTTGTTGTTGACAATGATAATCAGTCACTTTGTATAAGTGGAGACAGTGGTAGCGGAATATTTGTCTGGTGTGTTGATCCTTCACTCAGTAATGAACCATTGAATAAGTGGTATGAAAGTAATGATTGGATTTATCGAGGTGTTCACTGTTTGGCTGTTTCTGGAACTGGTTATCTTTACACTGGTAGTAGAGACAAATCTATTAAGGCTTGGTCTCTAGAGGTAAAGATGCTAATCCAATTTGCTTTATTAATTAGCATACAGGGATTATAATAATGTTGGTGTTTGGACTAAAATTTAACATTAGAGTACAGTTTGCCCTGGAAGTTGATTCCAGAATGTTTCCCTCCTATTATCTTGATAACAAGTCTGATTTGGTCATTCATATGGTTAAGGGGTTCATATCCATTTATCTTAATTTTAGCATGTTATGTGAAGTTAATTCTCTATCCCCCTTTTTCAGGATTATTCACTACGCTGCACAATGACAGGTCACAAATCAACTGTTTCTTGCCTTGCGGTTGCCTGTGGTATTCTTTACAGTGGAAGTTGGGATGGTTCTATTAGATCATGGTGGCTCACTGATCACAGCCCGCTGTCTGTACTGGAAGATGGTACACCAGGAAGCATTACTCCTGTGCTGTCAATTTCAACAGAACTCGATTTTGTTGTTGCATCATATGAAAATGGCTGTTTGAAGGTTTCCCTATACCTCAATCATGACTTATGATGTGAAATGTGTATATTCTGGTCACGTTGTGTTATAATTTTAATTGCAGTCAATGTGGTTTGTGCGTAAGCTAAATCATGGCATTTTTATTTTTGTCAATCAGATCTGGAAGGATGATGTCCTAGTAAAGTCAGAGAAACTTCAAAACGGTGCTATATATGCTGCTAAATTGAATGACAAGTGGCTCTATGCTGGTGGATGGGATAAAGTTGTAAATATTCAGGTCTGTTTAGTTGCTTTGTTCATATGAACTATAAAACATAAGCATGCATTTTCTAAAACATAAGTGCTCTATATCTAACATGTATTGATTACCTTGCATTTTTCTTGGGTTAATTATGTTAGGAGTTATTGGAAGATGATTCAGAGGTGGAAATCAGAGATGTTGCTACCTTTACTTGTGATTCAATTATAACTTCAATACTGTACTGGGATGGAAGGCTGATAGTTGGACTTTCTAACAGGGAGATTAAGGTATGTATACCTCTTTTTGTTTGTTGTCTACTTTATTAGTAAGCTTGTAGACAACTTCTGAGTTCCGTTTATGTGATGATGTTTGGGATTATAGTTCTACCTTAATTTATCTTTGGTTAAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018031