BGIOSGA018038

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Revision as of 02:29, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018038| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018038, complete gene.| tag = P0426G0...")
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Gene Name

BGIOSGA018038

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018038, complete gene.

LocusTag

P0426G01.10

Ensembl Transcript ID

BGIOSGA018038-TA

Ensembl Protein ID

BGIOSGA018038-PA

Length

3161

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:21741993..21745153

Sequence Coding Region

21745142..21745153,21744713..21744811,21744518..21744631,21744179..21744250,21743980..21744090
,21743727..21743846,21743437..21743538,21743273..21743345,21742841..21742921
,21742690..21742754,21742481..21742582,21742198..21742383,21741993..21742061

Genome Context

<gbrowseImage1> name=IndicaChromosome05:21741993..21745153 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:21741993..21745153 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGTCTGCAGGAAATAATGTCCTTCATTAGGTCATATGTTGTACCTGAAGGCTTTCCGGATAGTGTCACTCCTTCATATGTCCCATACATGACATGGAGAGCATTGAAGCATTTCTTTGGTGGAGCAATGGGTGTATTCACGACAAGAACCTTGCTAAACTCTGTTGGAGTTGCCCAAAGTAGGGCAACATCTGGAGCTGTGGCTATCAACTGGATACTCAAGGATGGAGCTGGCCGAGTTGGAAAAATGCTTTTTGCCCGCCAAGGGAAGAAATTTGACTACGACCTAAAGCAGCTTCGCTTTTCTGGCGATCTCTTGATGGAGTTAGGAGCTGGGATAGAGTTAGCTACGGCAGCTTTCCCTCAACTTTTCCTACCTATGGCTTGCATCGCAAATGTTGTTAAGAATGTTGCTGCTGTTACATCAACCTCGACCCGTACACCAATCTACAAGGCATATGCAAAAGGAGAAAATATTGGAGATGTCACTGCCAAAGGAGAAAGTGTTGGGAACATTGCTGATCTGTTGGGAACTGGTTTGAGCATTTTAATTTCTAAGAGGAATCCATCATTGGTGACTTCATTTGCCTTCTTGTCTTGTGGCTATCTCCTTAGTTCATACCATGAGGTGAGATCTGTTGTGCTGAACACTCTAAACACGGCAAGATTTACTGTGGCAGTTGATTCCTTCATTAAGAGCGGACATGTTCCCTCATTGAAGGAAGGAAACTCACAGGAGACTATATTTAATCCACCATGGCGGCATCAGCCAGTTGCAATAGGATCAAGATTTGGAGAGGCATTTCAGGAACCTGCTTCTTTTGTTGCCATAAGGCCTTTGTTTGAGGATGAGAGGTACATTGTTACATATAACCCAACAAAGGACAAGGTATATGCTTTGCTCAAGGACCAAGCAAAGCCGGATGATATTCTCAAAGCCGCTTTCCATGCACATGTATTACTACATTTTATTAATGCATCACATGCTAACTTGAATGCACGGAAGCGGATGAACTCCAATCGGTCATACCAAAATGCAAACCCACTGAACATGGACTTTATACCACACATTGCTGAATCTTGCAAGATTGTCACTTCATCATATGGAGTTTTCAAGAAGAAAGCGAGGGAACAGGGATGGATAATGTCAGAATCATTGCTTAACCCTGGACGAGCTCGGTTGTGTGGAATAGTACCTCAATGA</cdnaseq>

Protein Sequence

<aaseq>MGLQEIMSFIRSYVVPEGFPDSVTPSYVPYMTWRALKHFFGGAMGVFTTRTLLNSVGVAQSRATSGAVAINWILKDGAGRVGKMLFARQGKKFDYDLKQLRFSGDLLMELGAGIELATAAFPQLFLPMACIANVVKNVAAVTSTSTRTPIYKAYAKGENIGDVTAKGESVGNIADLLGTGLSILISKRNPSLVTSFAFLSCGYLLSSYHEVRSVVLNTLNTARFTVAVDSFIKSGHVPSLKEGNSQETIFNPPWRHQPVAIGSRFGEAFQEPASFVAIRPLFEDERYIVTYNPTKDKVYALLKDQAKPDDILKAAFHAHVLLHFINASHANLNARKRMNSNRSYQNANPLNMDFIPHIAESCKIVTSSYGVFKKKAREQGWIMSESLLNPGRARLCGIVPQ</aaseq>

Gene Sequence

<dnaseqindica>1..12#343..441#523..636#904..975#1064..1174#1308..1427#1616..1717#1809..1881#2233..2313#2400..2464#2572..2673#2771..2956#3093..3161#ATGGGTCTGCAGGTTTAATTTGTCTCAGTTTGGGAACTGCAGGTGTTGTAGTTTTGCGCTACTCCATGTTTGATTTATGGCTATTAGTTGAGGTCCTTTGCTGTTGAAGCTAAGTTGCAATTTTTTTAGAAAAGTGATGCTTGTGACTCTTTAGAGCTACTTGTTCGTTGGATGGTTCTTAATAGCACTTGTTTCTTTTGTTTACATTCTCTTGGTGCCAACTGTCATGTTCTTCCCCTAGTTTGTTCTACTAAAATATTAGGTGCATCTGCTATGATCTTCTGGAATGACATGGCAATGAGTGATGAACTACGAAATGATTATTAAACTTTTCTGTTGCAGGAAATAATGTCCTTCATTAGGTCATATGTTGTACCTGAAGGCTTTCCGGATAGTGTCACTCCTTCATATGTCCCATACATGACATGGAGAGCATTGAAGGTGTATTTTCTGGACATGACTTGGATTATTATCACTGTTGACTGTATTATCTTGCTAAATCCCTACTATTTCTCTTTTTAGCATTTCTTTGGTGGAGCAATGGGTGTATTCACGACAAGAACCTTGCTAAACTCTGTTGGAGTTGCCCAAAGTAGGGCAACATCTGGAGCTGTGGCTATCAACTGGATACTCAAGGTAAAAATGGTTTTTGGCTAGAACAACATAGAGAATAAGAATGGCCTTTCTTCAACCTGCCTAGCTTGCTATCTAGCTTGACTAATAGTTGATGTGGCACTAAACATTATCAGTACCCACTGACTAGATATCACCCTGCTACCTGCCTAGCGCGTAGTGCCTTAGTGATACCAGTGACCTACTCAGTATGATTTAGTTTCTAAGTGCTGATGTGTTCAGATTAACCTTTTGTGATTGTGCTATTCTCTGATAGTTTCATTCCTACAGGATGGAGCTGGCCGAGTTGGAAAAATGCTTTTTGCCCGCCAAGGGAAGAAATTTGACTACGACCTAAAGCAGGTGCAATATTTGGAATCCATGTTTTGCAATTGTTTTGAGCTTTATTTTGCTCTATGCAAAAAACTGATCGAAAACACTTTCACTTCAGCTTCGCTTTTCTGGCGATCTCTTGATGGAGTTAGGAGCTGGGATAGAGTTAGCTACGGCAGCTTTCCCTCAACTTTTCCTACCTATGGCTTGCATCGCAAATGTTGTTAAGGTTTGACCTAGCGGTTTACTGTGACGAGTCCTAACATTAATATGGCTTGTTTGATAAAGTTACTGTAATGAACCCTTTTTGTACCTGCAAATGTACTGAAGATTGTTCTACTTGATGAAATTGTTACATTCAGAATGTTGCTGCTGTTACATCAACCTCGACCCGTACACCAATCTACAAGGCATATGCAAAAGGAGAAAATATTGGAGATGTCACTGCCAAAGGAGAAAGTGTTGGGAACATTGCTGATCTGGTAATCATTCATCTTTTGCATTTTGTTTCTTGTTGGTCTGGTTACCATACATGTAGCTTATATATTCTGCTGGCATCATTTATGTTAATAGTATGCTGGCTACTAAAATTTGTCTTATTCAGTACTGCACTTATATGAAAATTTGCATTCAATAGTTCACTGATATTTCTGTCTTTTTATGTGTGAAGTTGGGAACTGGTTTGAGCATTTTAATTTCTAAGAGGAATCCATCATTGGTGACTTCATTTGCCTTCTTGTCTTGTGGCTATCTCCTTAGTTCATACCATGAGGTTTGCTTTTGAACTTTCTTGATGCTCTTATAATTAAATCATTCTGATAAAAGTTATTGGTTAACCAATCAAATATTATATGTATTCTCAGGTGAGATCTGTTGTGCTGAACACTCTAAACACGGCAAGATTTACTGTGGCAGTTGATTCCTTCATTAAGAGCGGTATGCAACTTTGACTTCTAGAGTCATTCAGACTTTGTAATTTGCAATAGGAGAAAAGTTTGTAGTTGTGTATACTGCTGCACCTTGAAATACAATGTGAAGCATCATCCTTAAGAAGTTCAGATGGCGCAACTAAATGTTCTGGATGCCACAGATAGATTTAAGAATGAATGGCAGACATAGTTGAAGACATTTATCAATATTCAATCTGCACATATTGTTTGAATAAAATGTGGAATGTGGAATTGCTTGAGCAACATATCGCAAAGAACTGTATTCATTTTAAAAGAAGTCCATGAAAAGTTGCAGTATTCAGTCTAATATTTGGATTCTCCATATCTATTGATGCAGGACATGTTCCCTCATTGAAGGAAGGAAACTCACAGGAGACTATATTTAATCCACCATGGCGGCATCAGCCAGTTGCAATAGGTTTGCATCTATAATTAAAGATTTTTATGTATTTTTTCATTCATGCAGATTTTAGAGCCTTTTTATAATCAATTTTGATCTTATAGGATCAAGATTTGGAGAGGCATTTCAGGAACCTGCTTCTTTTGTTGCCATAAGGCCTTTGTTTGAGGTACTATCTCGATGATGTTATTAGTATTTGTCCTTAGACTGTTCTTTTCCTTCATTAGCACAATAGAGCATTGGCATGTGTGAAGTTGTGATATATTTTAATTGTAGGATGAGAGGTACATTGTTACATATAACCCAACAAAGGACAAGGTATATGCTTTGCTCAAGGACCAAGCAAAGCCGGATGATATTCTCAAAGCCGCTTTCCATGTAAGTATTGATAACAAGGTTAACAACTTTGGCAATGCCATACTGGTCAAATTTGTTTGCATTATATCATCCTAATCAAATGTGTTTTGGTTTACAGGCACATGTATTACTACATTTTATTAATGCATCACATGCTAACTTGAATGCACGGAAGCGGATGAACTCCAATCGGTCATACCAAAATGCAAACCCACTGAACATGGACTTTATACCACACATTGCTGAATCTTGCAAGATTGTCACTTCATCATATGGAGTTTTCAAGAAGAAAGCGAGGGAACAGGTGAAACCGCACCACCTTTATCATTTACATTTTGTACCTGGTTTGGGCTGAACTACTAGTGAATAACAATTCCGACAAAAACATGGCATGATTCTCGTTGTATGGCATAACTAACGACTCATTTTCTGATTCGCAGGGATGGATAATGTCAGAATCATTGCTTAACCCTGGACGAGCTCGGTTGTGTGGAATAGTACCTCAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018038