BGIOSGA018072

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Revision as of 02:29, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018072| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018072, complete gene.| tag = OsI_199...")
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Gene Name

BGIOSGA018072

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018072, complete gene.

LocusTag

OsI_19927

Ensembl Transcript ID

BGIOSGA018072-TA

Ensembl Protein ID

BGIOSGA018072-PA

Length

6659

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:21048406..21055064

Sequence Coding Region

21054929..21055064,21054475..21054725,21054251..21054361,21053078..21053413,21052116..21052292
,21051726..21051809,21051269..21051391,21050103..21050300,21049750..21049985
,21049462..21049666,21049077..21049379,21048406..21048705

Genome Context

<gbrowseImage1> name=IndicaChromosome05:21048406..21055064 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:21048406..21055064 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCACTCCACCTATCACCGTGGATTCGGAGGAGGATCCCGTATAGGGGGATCTGCGCGAGCGGCTGGGACACTCGAGGCAACTGGCCTGAGTTCTCCGCGCTGCCGCGGGCTACCGGGGAATGTGCGGAATGTATTAGACAAGTTCTTTGTGGGTCTTTGCAAGAAATCGATGGTACATTACTCTTCTTGTAAACATGAGCAGGCGGTCACCATCGACGTGAATGCGTGGACCGATGCTGGTCATGCTGTGAATCATCTCTATGATATGCTATACATGATGGGCCGTGATGACATCCCAGTTGGTGTTGGTGGTGATGGTGGTATATCAGGCCATGGCACCATACACCCGAACGTTGGTGGTTATTTACCTCTGATTGATCAGGGCATGACAACCTTTGGGCCCTGCCGGTATAGGCAGGCTATTCCACTTGAAGGCGGTGGGCGGTTGGACATTGACACAAACTCTGGCATAAGAAAAGGCTTCCTTCCACAGGGTAACAGAAGATACATACCACTTCATCAGTCTACAGCACAGCAAGTGTTGATAGAGACAATATCAGCAGGCCCTACAACCGTCATGCTAATAGGGTCACATACGAACTTCGCCATTTTTCTTATGACACATCCACACCTGAAAAAAAACGTGGAGCACATATACATTATGGGTGGTGGAGTGAGATTGGAGAACCCTACAGGTTGCTGCCCAAAAAATTCTACCACATCTTGCACGCCACAGCAGTGTGGTGACCATGGTAACCTGTTTACTAGCTACAGAACCAATCCGAATGCAGAATTCAACATGTTTGCAGATCCTTTTGCTGCATATCAGGTGTTCCATTCTGGCATTGCAATCACCCTTGTCCCTCTTGATGCAACTAATACAATTCCGGTCAATGAGGAGTTCTTTCATGCATTCCAACAACAACAAAGTACATATGAAGCACAATATTGTTTTGACTCTTTAAAAATGGCTCGAGACACATGGTTCAATGATGAATTCTATACAGGTGGAGTTCATAGCGGTCATGTTCAGACTGGAATTACAGATAGCTTCTGCCTTGCAAAGGAAAGTAAGAAAGGAAGATGCGAGGATGGATATACTAAGGAAGAGTCTGGTCCAGAAGCAGTTCGCGTTTGTGTTGCTACAAAGGCTAAAGTAAATGTAGATAAAAGTAGCCTGCTAGATAGGGAATTCTTTAAGAGCTTCCTCGAGACCCTAAATCTCCCTGAGAACACTGGTCTCTTCAACATAACGGCCCAGTTTCCATTTTACAGAGAGGTTCTATACAGGCCAGACTTCACAAACAAAAGTAGGGGGAAACCAGTCATTTTTGACATGGACATGAGTCCTGGAGATTTTATTTCACTTATATACCTTTTGAAGGTGCCTACAGAATTAATAGATTTAAAGGGGATTTTGGTCAGTGGCAATGGTTGGGCCAATGTTGCAAGTATTGATATTGTTTATGACATTCTACATATGATGGGCCGTGATGATATTCCTGTTGGCCGTGGTAGCACTTCTGCATTAGGCACTGAAAGTCTTGGTTGCAAGTATGTCAGTGCTATTCCCCAAGGTAGTGGTGGGCTTCTTGATTCTGACACTCTCTATGGACTAGCTCGGTCATTGCCAAGAAGTCCTAGAAGGTATACTGCTGAAAATTCAGTAAAATATGGTGCTCCTAGAGATACTGATCATCCAGAACTTCGACAGCCGTTGGCTTTTGAAGTTTGGCAGTTTGTTAAACATCAACTTGATCCGAATGAGAAGATCACCATTCTTACCAATGGACCTCTTACAAATTTGGCCAACATTGTGCTATCTGACAGGAATGCAAGTTCTGTAATTAAGAGTGTTTATGTTGTTGGAGGTCATATCAGAGATGACAGTAATACAAAGGGAAATGTGTTCAGTGTACCATCAAATACTTATGCAGAGTTTAATATATTTCTTGATCCCCTAGCTGCCAAAACAGTACTAGATTCCACTCTGGATATCACACTAATTCCTCTTAGAGCCCAAAGAAAAGCTGCTTCCTTTCATGCGCTCCTTGAAGCTCTGAAGCATGCTGAGACTCCAGAATCACGTTTTGTTCATCACTTGTTAACGTTGCTGCATGACCTTCAACAGAAGCACCAGCTGTATCACCACATGGATATGTTTCTGGGAGAACTCCTTGGCGCTGTTTCTTTGGTGGAAGGATCAAATATCAAGCAGTCATTACAACGGAAACCAATAAGCATTGTTGCTAACAGTACTACAAGCATTGATGGGCAGACTGTAGTTGACAACCAGAGTGCAAATTTGGTAAAAGTATTACTCGATTTCAATAGTGAAGAATATTATAAACGGGTGGCCAATTCTCTAGGCGACAAGGAACGGTCTGCCGTTATTAGTGGTTTTGCAGAACAGAGGGCGATCTGGAGCAACCCACCTGAGAATGGGGGGGTATGA</cdnaseq>

Protein Sequence

<aaseq>MAHSTYHRGFGGGSRIGGSARAAGTLEATGLSSPRCRGLPGNVRNVLDKFFVGLCKKSMVHYSSCKHEQAVTIDVNAWTDAGHAVNHLYDMLYMMGRDDIPVGVGGDGGISGHGTIHPNVGGYLPLIDQGMTTFGPCRYRQAIPLEGGGRLDIDTNSGIRKGFLPQGNRRYIPLHQSTAQQVLIETISAGPTTVMLIGSHTNFAIFLMTHPHLKKNVEHIYIMGGGVRLENPTGCCPKNSTTSCTPQQCGDHGNLFTSYRTNPNAEFNMFADPFAAYQVFHSGIAITLVPLDATNTIPVNEEFFHAFQQQQSTYEAQYCFDSLKMARDTWFNDEFYTGGVHSGHVQTGITDSFCLAKESKKGRCEDGYTKEESGPEAVRVCVATKAKVNVDKSSLLDREFFKSFLETLNLPENTGLFNITAQFPFYREVLYRPDFTNKSRGKPVIFDMDMSPGDFISLIYLLKVPTELIDLKGILVSGNGWANVASIDIVYDILHMMGRDDIPVGRGSTSALGTESLGCKYVSAIPQGSGGLLDSDTLYGLARSLPRSPRRYTAENSVKYGAPRDTDHPELRQPLAFEVWQFVKHQLDPNEKITILTNGPLTNLANIVLSDRNASSVIKSVYVVGGHIRDDSNTKGNVFSVPSNTYAEFNIFLDPLAAKTVLDSTLDITLIPLRAQRKAASFHALLEALKHAETPESRFVHHLLTLLHDLQQKHQLYHHMDMFLGELLGAVSLVEGSNIKQSLQRKPISIVANSTTSIDGQTVVDNQSANLVKVLLDFNSEEYYKRVANSLGDKERSAVISGFAEQRAIWSNPPENGGV</aaseq>

Gene Sequence

<dnaseqindica>1..136#340..590#704..814#1652..1987#2773..2949#3256..3339#3674..3796#4765..4962#5080..5315#5399..5603#5686..5988#6360..6659#ATGGCGCACTCCACCTATCACCGTGGATTCGGAGGAGGATCCCGTATAGGGGGATCTGCGCGAGCGGCTGGGACACTCGAGGCAACTGGCCTGAGTTCTCCGCGCTGCCGCGGGCTACCGGGGAATGTGCGGAATGGTGAGAAATCGAAGCAGCTTGTTTCTTCCGCGTTCGCATTAGCCACCCAAGGAGCAATCGGTAGCTATTGATCGGAAATTTGGAATCGATGATGATTTTACAGCGATTGTGTGTCAAGCTAAGGATTGATGTAGCCGCTCAGTTAAATAGTGATTTTACACCGACTGATTATGCAAATTTTCTTCTGACATTATCTATGGTAGTATTAGACAAGTTCTTTGTGGGTCTTTGCAAGAAATCGATGGTACATTACTCTTCTTGTAAACATGAGCAGGCGGTCACCATCGACGTGAATGCGTGGACCGATGCTGGTCATGCTGTGAATCATCTCTATGATATGCTATACATGATGGGCCGTGATGACATCCCAGTTGGTGTTGGTGGTGATGGTGGTATATCAGGCCATGGCACCATACACCCGAACGTTGGTGGTTATTTACCTCTGATTGATCAGGTACAATTTAGAATTCATCACTTTGTTATGATCTAGACCAAAATATGTAGTAGAATTGCCCAAATTTATGTCTGCTTTTTTAGGATCACTAATATACAAACGTTCAAATTTAGGGCATGACAACCTTTGGGCCCTGCCGGTATAGGCAGGCTATTCCACTTGAAGGCGGTGGGCGGTTGGACATTGACACAAACTCTGGCATAAGAAAAGGCTTCCTTCCACAGGTATGCTTCATTTTGTGCTCCTTCTTGTCAAATGCCGCAATTTTGGTGTTCAGGTAGGATAAGTGCACACTGCATCTCTCGCAAAGAAAGTGCACATAGTAGTTAAGTCGTTGTTCCTAAAATTGGTCAGTTTTCGCACCACTGCACCACTACATAATTTTGTGCCAACATATCATTTTAAATTGAGGTACTTTAAGTTGAGTGGAGTATCTAATATCCTTAGATCTAAAATCCTTTAGTCGGAGCAACTGTCAAACACGGCAATAAAATTTGGTCCTACGGTCTCTCCTTCTCATTTCCTTGTTAACTTAGCAGTTGTCTTGCTAACACAAAGTTGTTGGAACTTCAAAACTACCAGCAAGAACTCTGTATATTGACAATGTGCTCCTAGGACTGCTCTATGTTTCTTTTTGTCTATTTCAAAGAGCTACACTGACTATTTGGATGGATTTTTCTATTATTCTTTAAGACTTCCAACAAAGTCATGTTGTAAACATTTCAGGCAGAAGGGCAGATATCAACAAATTTGTATAAATGTCTCTAGAAACTGGTCATCTTTCACTTGGTCTCTAATTGGTTTGTAGTTTGAGGCAAGCTGACTAGTAAGAATTTATGGATGACAGTATGACACTCAAAAATCATTGCTGTTATCTGAGCACTTGTATTTGCAGTATCAGTGAACTGGGTCTAGGGAATTCGGGGATGCCATTTGGCATTTTCAATATCAATCAATCGCTGAAGTGTGCTTTGATCTTTTCTGCAAGAATATTACTGGATAATCTGGCTATTTTCGTTTTTATTACCAGCTCCAATGTACTCTTTTAATATGTAAAACAGGGTAACAGAAGATACATACCACTTCATCAGTCTACAGCACAGCAAGTGTTGATAGAGACAATATCAGCAGGCCCTACAACCGTCATGCTAATAGGGTCACATACGAACTTCGCCATTTTTCTTATGACACATCCACACCTGAAAAAAAACGTGGAGCACATATACATTATGGGTGGTGGAGTGAGATTGGAGAACCCTACAGGTTGCTGCCCAAAAAATTCTACCACATCTTGCACGCCACAGCAGTGTGGTGACCATGGTAACCTGTTTACTAGCTACAGAACCAATCCGAATGCAGAATTCAACATGTTTGCAGATCCTTTTGCTGCATATCAGGTATATGGCCCAGATTTACATGTTAGGCTGTGCCACCGTTTTCTTTTGTTGAAATTTGGAAGTAGATTTTTGCAATGCCTTACTGATCTGATCTCTATCGTTAAATTTAAGGTCTTCAGTATCTCTTCTCCATAAGGAGTAAAGTCAGAAACTTACATTTCATCCCATCCTGTACTGCTTTTCTTAATTAATATGTACCTTAAGTTCCTCTGTTGGTTTTAAATTAATATGTACTCAATTAGTACATGCTGACATACTCGTTAACCTTGTTCTTCTTTTGTATCTAAGAGACTTGAACTCTTTTATTAGACTAGTATCATATAACAGCTATAGAAGACTTGGTTTCTAAAATGAAAACTTCCATCTATGATTCTTTTGTTGAAGAAAGAATTTTATGCCACATTTACTTATATCTAAACTCTTTTTTACTTCATCATTCTTAATCTTTATCTAGCAGATTATCTATACTCCTTAAAAAGACTCAATGGTGGTGGCAGTGAATCTGCCATCCCACCTACTCCCATTACAATCTTTACATATTACCCCTTGAACTTCTTAATATTACATAAGAACTAAATTTGGATGGATAGCAACATATAAAATTAATAAATGTATAGCCACATATAAAATTATGTGGATAGCCACATTTTCCTATAGGGAAAATGTGGATAACATATTTCACGGAAAATATGATTTATTCATTTTAGAAATATGGTGATATTTTTCCTGTTATCTGTAGCAAAACACAGGCCTTTAGCTAGTATAATATAATTTATTCATTTCAGGTGTTCCATTCTGGCATTGCAATCACCCTTGTCCCTCTTGATGCAACTAATACAATTCCGGTCAATGAGGAGTTCTTTCATGCATTCCAACAACAACAAAGTACATATGAAGCACAATATTGTTTTGACTCTTTAAAAATGGCTCGAGACACATGGTTCAATGATGAATTCTATACAGTAAGTTATATGCTTATATCCTTAGATCTTATGTTTGGTACAATATGGGAACCTGTTCACTTTTACCTTATTATTATTTTTCTCTTCTGCTGACCTAATGCAGAGCTACTTTATGTGGGATTCCTTTACTTCTGGTGTAGCTCTATCCAGCATGCGCAATGACAATAATGCCCAATCTGAAAATGATTTCGCCGAGCTTAATATATGAACATAACAGTAATAACATCAAATAAACCATATGGTATACACGATGGCTCAAACCCATTGTTCGATGATCATGTCATTCCCAAGTTTGGTCTTCAAAAGGGTGGAGTTCATAGCGGTCATGTTCAGACTGGAATTACAGATAGCTTCTGCCTTGCAAAGGAAAGTAAGAAAGGAAGATGCGAGGTATGACATTGCCAAATTGATCTTTATGGGAAAATTCCATTATTTTTTATTATATTATTACTGCTTCCATTTAACTTCATTAGCCTTCCTCTTATGCATACATAACCAGTTATATCATGGAGTTGCATAGATTTTTTTTTTTAAAGTAAACGTGAACTTAAGTTGTCATATGGATACATGTATATATATATATATATATATATATATATATACTAAAGGAATACATTAATTGGAGTTACTTCCATAGTTCCATGATGTTAGTGAAATAGTGCTTTGGACATAATCTGCTGTGCATGACATATTCCATTTTCTGACAAATTTAATTTTATCATAGGATGGATATACTAAGGAAGAGTCTGGTCCAGAAGCAGTTCGCGTTTGTGTTGCTACAAAGGCTAAAGTAAATGTAGATAAAAGTAGCCTGCTAGATAGGGAATTCTTTAAGAGCTTCCTCGAGGTAAGCTGTTCACTTGCAGCTCTCAAGGTTGAATATGAACTTTTTGTATGATATCTAAGTTTTTTGGTCAAAATTTGATGTCTAACCTGTGCGAATCCAATCAGCTGGCTAGTTTCCAGCTAGTTGGATTTGTCATGCATAACATGTAAACTGTAGCCATTATTGTTCTTTCTGTATTTGCTGATAGTTCTAAATGCTTGCAGAAATTTGGAAATTTTCATATTGAGTTGGGTTTTTTTGGGGGCATTGAATCGGCACCTAGGCACCTTAGTATTTCTGCTACTCCCTCCATCCCATAATATAAGGCGCCCACGCATTTCAAGATTCCACCTTCAAAACATTTTGACCAATATTTAGTATATTATGAATTAAATTTTACTTGCTAAAAATTATATCATTGAATTGACATTTGATTTACTTTCATATGGTTATAATTTTGTTGCTACAAACCTTATAGTATACGAGAAATTATAAGATAGATTAGTTTTGGAGATCGTGCCAAGTTTGACTATGCCTTATGTTATGGGATAGAGGGAGTATTTCGTTATATATGAATAAATCATAAATTTCTTGCTTCCTCAATGATCCATTCAGAATGAGTTTTAAACCAGCACTTGGCACTTCAATATTACTGTTATTTTATTCTAGATGAGTAAATCATAAATTTTTATTCAATATGAAGTCTATGGGTGACAACTGCTACAATGCTGAATCTCTGCATGTGCGCATGCAATAGATTACCTTAGTTTACATGTTTTTTTTCTCTGAATGCTCAGTAGCATTTCATAGCTTAACTGATATTTAGTGATTAATGTTTTGTCACAAAAAAATACTCATGACGGACCTGATGCACTACTATGTAATGTTAGATATGAACAAACTGTGCCTCTTAGCATTTCACAGAAAACATTTACGCTATATTTTTCCCTATTCTTAAAAGACAGTAACAACTAGACTGTGTCCTGCAGACCCTAAATCTCCCTGAGAACACTGGTCTCTTCAACATAACGGCCCAGTTTCCATTTTACAGAGAGGTTCTATACAGGCCAGACTTCACAAACAAAAGTAGGGGGAAACCAGTCATTTTTGACATGGACATGAGTCCTGGAGATTTTATTTCACTTATATACCTTTTGAAGGTGCCTACAGAATTAATAGATTTAAAGGTATGTTTTTTGAAGGTGCAAATAGTGAAAACGGTTCTGCAAAGTGCACCTATGTTGAAAAAATCGTTTTAACTCCTTTATTTGTCTCTACATTACATTGTGATATAATGATTGTAGGGGATTTTGGTCAGTGGCAATGGTTGGGCCAATGTTGCAAGTATTGATATTGTTTATGACATTCTACATATGATGGGCCGTGATGATATTCCTGTTGGCCGTGGTAGCACTTCTGCATTAGGCACTGAAAGTCTTGGTTGCAAGTATGTCAGTGCTATTCCCCAAGGTAGTGGTGGGCTTCTTGATTCTGACACTCTCTATGGACTAGCTCGGTCATTGCCAAGAAGTCCTAGAAGGTATCCTTCCAGTGACCAAATGACAAATATACAATTCAATGTGCATGGTGTAAATATTTACACTTTTATGCTTTCATAACCAGGTATACTGCTGAAAATTCAGTAAAATATGGTGCTCCTAGAGATACTGATCATCCAGAACTTCGACAGCCGTTGGCTTTTGAAGTTTGGCAGTTTGTTAAACATCAACTTGATCCGAATGAGAAGATCACCATTCTTACCAATGGACCTCTTACAAATTTGGCCAACATTGTGCTATCTGACAGGAATGCAAGTTCTGTAATTAAGGTCTGGTCATGTTTGATATCTTTTGATTCTTACAATAACTTCAATTGTATGCATGCTAACTACAAAATTTCTCTCTCTGCAGAGTGTTTATGTTGTTGGAGGTCATATCAGAGATGACAGTAATACAAAGGGAAATGTGTTCAGTGTACCATCAAATACTTATGCAGAGTTTAATATATTTCTTGATCCCCTAGCTGCCAAAACAGTACTAGATTCCACTCTGGATATCACACTAATTCCTCTTAGAGCCCAAAGAAAAGCTGCTTCCTTTCATGCGCTCCTTGAAGCTCTGAAGCATGCTGAGACTCCAGAATCACGTTTTGTTCATCACTTGTTAACGTTGCTGCATGACCTTCAACAGAAGCACCAGCTGTATCACCACATGGTAAACATTTGGTACATCTGCATTTCCTTCTATTTATTTGCTATAGCAAAAAAAAAGGGCCCATAAGAAAAGCCTGAGGTGCAGCACCTTTTTTTTTTTTCTCATCATGGCCTCTAGAGCGTCTTACTGAGCAACGATAGTCCAAATGAAAGGAAGAGATTTTTCATCATTGCTCATGAGAAACTGCAATAAGCTTTGCTTTCTGCTTACATGAATCCTGACTGCTGACTTCTGACCATCCCATTTCCAGTTGGATAGTAACTCAGCCAATGACAGGATACAGAGCCCAAAATTATTGCTCAAACTACTATAGTTTTGTACTTGATACAGTGCTTAACTTTCTTTTGACGGGTAAATTGTGATTATCTTAGGATATGTTTCTGGGAGAACTCCTTGGCGCTGTTTCTTTGGTGGAAGGATCAAATATCAAGCAGTCATTACAACGGAAACCAATAAGCATTGTTGCTAACAGTACTACAAGCATTGATGGGCAGACTGTAGTTGACAACCAGAGTGCAAATTTGGTAAAAGTATTACTCGATTTCAATAGTGAAGAATATTATAAACGGGTGGCCAATTCTCTAGGCGACAAGGAACGGTCTGCCGTTATTAGTGGTTTTGCAGAACAGAGGGCGATCTGGAGCAACCCACCTGAGAATGGGGGGGTATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018072

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