BGIOSGA018087

From RiceWiki
Revision as of 02:30, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018087| Description = Transmembrane bax inhibitor motif-containing| Definition = Oryza sativa Indica Group BGIOSGA018087, complete gene.| t...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA018087

Description

Transmembrane bax inhibitor motif-containing

Definition

Oryza sativa Indica Group BGIOSGA018087, complete gene.

LocusTag

OSJNBA0035J16.16

Ensembl Transcript ID

BGIOSGA018087-TA

Ensembl Protein ID

BGIOSGA018087-PA

Length

1989

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:20830032..20832020

Sequence Coding Region

20831711..20832020,20830597..20830710,20830353..20830510,20830032..20830244

Genome Context

<gbrowseImage1> name=IndicaChromosome05:20830032..20832020 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:20830032..20832020 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCGGCGGCGGAGATGCAGCCGCTGGCCCCGGCGGGCTACCGCCGGGCGCCGGAGATGAAGGAGAAGGTGGACGCCTCCGCGGTGGACCTGGAGGCCGGCACCGGGGAGACGCTGTACCCGGGGATCTCGCGCGGGGAGAGCGCCCTCCGATGGGGGTTCGTCCGCAAGGTGTACGGCATCCTCGCCGCGCAGCTGCTCCTCACCACCGCCGTCTCCGCGCTCACCGTCCTCCACCCCACCCTCAACGCCACGCTCTCCTCCTCCCCGACCCTCGCCCTCGTGCTCGCCGTCCTCCCCTTCGTCCTGATGGTCCCATTGTATCATTATCAGCACAAACACCCACACAACTTTGTTTACCTGGGTCTGTTCACGTTGTGCTTGAGTTTCAGTATTGGTGTGGCATGTGCTAACACTCAAGGGAAAATTGTGCTTGAGGCATTAATATTGACCTCAGCTGTGGTTGCCTCTTTGACTGCGTATACTTTCTGGGCTTCAAAGAAGGGGAAAGAATTTGGTTATCTTGGACCAATTCTGTTTTCTGCTCTTGTTTTACTTGTTGTGATAAGCTTTATTCAGGTGTTCTTCCCATTGGGCTCTGGACCAGTTGCATTGTTTGGTGGCCTTGGAGCTTTAGTTTTCTCAGGTTTCATCATCTACGACACAGAGAACTTGATAAAGCGCCACACTTATGACGATTACATTTGGGCCTCTGTTGAGCTCTACCTTGACATCCTCAACTTGTTCCTTTATATCCTGAACATGATCAGGAGCATGCAAAGTGATAACTAG</cdnaseq>

Protein Sequence

<aaseq>MASAAEMQPLAPAGYRRAPEMKEKVDASAVDLEAGTGETLYPGISRGESALRWGFVRKVYGILAAQLLLTTAVSALTVLHPTLNATLSSSPTLALVLAVLPFVLMVPLYHYQHKHPHNFVYLGLFTLCLSFSIGVACANTQGKIVLEALILTSAVVASLTAYTFWASKKGKEFGYLGPILFSALVLLVVISFIQVFFPLGSGPVALFGGLGALVFSGFIIYDTENLIKRHTYDDYIWASVELYLDILNLFLYILNMIRSMQSDN</aaseq>

Gene Sequence

<dnaseqindica>1..310#1311..1424#1511..1668#1777..1989#ATGGCGTCGGCGGCGGAGATGCAGCCGCTGGCCCCGGCGGGCTACCGCCGGGCGCCGGAGATGAAGGAGAAGGTGGACGCCTCCGCGGTGGACCTGGAGGCCGGCACCGGGGAGACGCTGTACCCGGGGATCTCGCGCGGGGAGAGCGCCCTCCGATGGGGGTTCGTCCGCAAGGTGTACGGCATCCTCGCCGCGCAGCTGCTCCTCACCACCGCCGTCTCCGCGCTCACCGTCCTCCACCCCACCCTCAACGCCACGCTCTCCTCCTCCCCGACCCTCGCCCTCGTGCTCGCCGTCCTCCCCTTCGTCCGTACGTGTGCCCTCCTCCCCATCTGATGATGCTTCGGTTGACCTCTATCTTAGATTTCTTGTGCTTGATGAGAAATTGAGAATGGTTTTATTCTGTGATCGGTCGTAGATTCATCCGCGTCCCGCTGATTAGCAGCTGGTTTGATTTGTAGGCTACATAGTTGAATCTAGATAGATCGGTGCGTTACTTCATATATGCCTTGCTGTTGGAATCAAAACTTTGGCCTCTAGATCTAGGATCTAATTAGTTCACGAATTAATACTTAGAATTAGACGTAGTAAGTTCTGCATCATGGATTTGCCCACTCGCATTCTGAATTGGGATGTGAAGTAAATGTTTGTGTTATATTATAAACTAATGCTGCAATTGCTTTTCCTATAAATTGTGAATAGCATTTCTATAGATCATGTTCAGCGACGAGTTTATGACAAACTAGTTAATGCAAACGCTGTCGGAAAATTTTGTTACAAATGTTATGAGACCTTAAATGATATGATTCATATGCATTTTGGTTTGGCCTTATTTGTTTCCCTTGACATCATATGATGCGTTTGTGTTAGTCAAGTGCGGAGTGTGATGATATGGGCATGGTGGGGCTGTCTTTAGAAGTGTAGAACTCTTCTGAACACTTGTGTATCCAGATTATTTTTTTTTTTCAATTCTGAAATTTCTGCTTTGTGTTTGCCATAGACAAGATTGTTTTATCCCCTAGTTGGATCAAGTAGGCAGCACACATAACTGTGTAAGAGATAGTCAATGTATTTAGTCCGGTATGAGTTATATTTTAATAGTATATGGAAAAATATCAAGGAAAGTCTCAAATCTTGGATCAGTGGGGCTGTTTTTTTTTACTCCCTGCTTTTTGTTCATGTTAGTGTTGCGAGTAACTAAATTTCTTCATCTGAATTTTGAGAAAAGCCTGAGTAGATGACATTGTTAATTGTTTGGTAGGATGGAATGGTTTTGGTGCTCTCAGCTAATTTTGTGTTATTTCTTGCAGTGATGGTCCCATTGTATCATTATCAGCACAAACACCCACACAACTTTGTTTACCTGGGTCTGTTCACGTTGTGCTTGAGTTTCAGTATTGGTGTGGCATGTGCTAACACTCAAGGTTGGTTTTCTTTCCTTTGCAAGTTTTAGTTAGTTTCTTCAACTGCCAACAGTACTTTTTACATAACAATCATTTGTGTGCTGCAGGGAAAATTGTGCTTGAGGCATTAATATTGACCTCAGCTGTGGTTGCCTCTTTGACTGCGTATACTTTCTGGGCTTCAAAGAAGGGGAAAGAATTTGGTTATCTTGGACCAATTCTGTTTTCTGCTCTTGTTTTACTTGTTGTGATAAGCTTTATTCAGGCAAGTGTACACTCATTTTGATACAATATACTTAATTCAAATAGCGATCTTACCATTACGAAACCACCAATTGTAATAAGCACTTTGCCGTGATATGCTGTGTTGCAGGTGTTCTTCCCATTGGGCTCTGGACCAGTTGCATTGTTTGGTGGCCTTGGAGCTTTAGTTTTCTCAGGTTTCATCATCTACGACACAGAGAACTTGATAAAGCGCCACACTTATGACGATTACATTTGGGCCTCTGTTGAGCTCTACCTTGACATCCTCAACTTGTTCCTTTATATCCTGAACATGATCAGGAGCATGCAAAGTGATAACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018087