BGIOSGA018107

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Revision as of 02:30, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018107| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018107, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA018107

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018107, complete gene.

LocusTag

OSJNBA0014C03.10

Ensembl Transcript ID

BGIOSGA018107-TA

Ensembl Protein ID

BGIOSGA018107-PA

Length

4285

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:20418374..20422658

Sequence Coding Region

20422575..20422658,20422383..20422445,20421416..20421542,20420619..20421016,20420279..20420455
,20420067..20420183,20419485..20419664,20419344..20419390,20418374..20419268

Genome Context

<gbrowseImage1> name=IndicaChromosome05:20418374..20422658 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:20418374..20422658 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGTCGTCGTCTTCTTCCCGGAGGCAGCCGCCCTCCGCGGCCGCCTCGTCCAGCACCGCCGGTTCGTCTTCGTCGGCCAAGGGGGAGGGGAAGGTGAGCACGGGGGATGATCTCCTGGACGCCCTCGTCGAGGTGTTCCCGCAGTTGAATTTCTTAACACTGGTAGAAGTTTGCATGGAATATAAGAATGATATAGATGGTGCTGCGGATTATATTATCCATAATGTCCTTCCAAGTATCCCGGACAACAATGATGCACATGCAAATGAAGGGCCTGCTTCGGTGGATAATGATGCAGATTCAGTGCAGTCTTACTTAGCGAACAAATACACAGCTGAGCAGGAGGAGGAGGAAGAGGAAGAGGAAAAGGAAGAGGAGGAGGAAGAGGAGGAGGAGGAAGAGGAGGAGGAAGATGAAGATGATGATGATGAGGAGGAAGATGAAGATGATGAGGAGGAAGATGAAGATGACGAGGAGGAGGATAGACTTATGGAAGAAAATTCTGATTGTTTGGTTGCTATTGATCTGAATTCAAAACCTGGAACTTCAGCTTTTGATGATGATTTGGTAACCCATGACGATGGATTACCTGCTATGAACATACAGTCAAGCTACCCTGTTAGACTTGAGTTGCTTGACAATGCAATTGCTGATGAAATTGACAAGAAGGTTACTTTGATGTCAAACGTAACAGCGATAAACCAAATGCTAGAGGACATAAAGTTAAAAGAAGAAAAAACAAAACAAGCTGTGTTGGAAGCAACTCAAGCTGGCAATGATATTTTTGTTAAGGTGGAGGAGTTAAAAGAGATGACAATGCTCTCAACAGAAGAGAACGACAAAGTTGTTGCAGGGGAGGTTTTCGCTGAGCAATCTATTCTAGCATCAGAAGCACATGGGCTTCAAGCTCGGTTGTCTAACATTTCTGAAGAAAGGAACAACTATGCCTTAATTATTGACGAGATGCGCCATACTCTTCAAAACAGATTTACTGAAGCTGAAGTGGAGACTGTAGCAGCTGAGAAGAAGAAGGTTGAAAGGGAAACATTGGCTGAGAAAATGTTGAATGAACAAGAACTCATACTTGATGCTACAAAGGAAAGATCCAAGATGCTAGAACAGCAAGTGCGGGAGAATGCAAAGCTGAGGGAGTTACTAATGGACCGAGGCCAAGTTGTGGATGCATTGCAGGGGGAAATGCTGGGAATCTTCGATAAAATTTCACAACTTCAACTCAGGGTTGATAAGCAACTTCCTGAACCCCTGCTATCAAGCATGTCCTCCTCAGTCAACTCAGCTGATAACATTGCACAGCTCCAGTGCAGAGTTGATGACCCACAGCATTCTGTTGATGATTCATTGCAACTAGCTTCACCTAGATTGTCCAGCTCATTCAAATCAACAGATAGCACTGCGCAAGCCCATTGTAGAGTTGATGAGCCACAAATTTCTGTTGATGAATCGCTGCTTCCTGTTGACGAGTGTGAGCAGCTGCAACTGATTTCACCAAGGTTATCTAGCTCAGTCATGTCTGCACAATCCCAATATAGAGTTGATGAACCGCTACTTCCTGTTGATGAGGTGTTGCAACTAGCTTCATCAAGCTTATCCAGTTCGCTCAAATCAGGAGATAACATCGCTCAACTTTTGGGAGTACTTGATGTGCATTTACCTGTTGATGAGTTACTGCAACTACCTTCATTGATCTTATCTAGCTCAGTGAAATCATCAGACAGCATTGCGCAGTTCCAACAAAAGGCTGATGCTGATGAGATGCTGCAATCATCTAGCTTAGCCAGCTCAGAGAAACCAGCAACTTTCAAGAATTGGTCATCTGCTTCAGACACCATTACACAGTTCCAGCAAAGGGCTAATGCTGATGAGTCGCTGCCGCTTCCTTCATCTAGCTTGGCCAGCTCAGGGAAACCAGCAACATTCATGAGTACTTGGTCATCTGCTGCAGAATCAAATTCAGTTTTCAGTGGTGATGAAGAGATTGATGATGCTTCCTTCCATGACAGTATTGATTTGGATGATAGCTGGGATTTAGTTGACGATGAAGCCATCTATATGTGTGCTAACTAG</cdnaseq>

Protein Sequence

<aaseq>MSSSSSSRRQPPSAAASSSTAGSSSSAKGEGKVSTGDDLLDALVEVFPQLNFLTLVEVCMEYKNDIDGAADYIIHNVLPSIPDNNDAHANEGPASVDNDADSVQSYLANKYTAEQEEEEEEEEKEEEEEEEEEEEEEEDEDDDDEEEDEDDEEEDEDDEEEDRLMEENSDCLVAIDLNSKPGTSAFDDDLVTHDDGLPAMNIQSSYPVRLELLDNAIADEIDKKVTLMSNVTAINQMLEDIKLKEEKTKQAVLEATQAGNDIFVKVEELKEMTMLSTEENDKVVAGEVFAEQSILASEAHGLQARLSNISEERNNYALIIDEMRHTLQNRFTEAEVETVAAEKKKVERETLAEKMLNEQELILDATKERSKMLEQQVRENAKLRELLMDRGQVVDALQGEMLGIFDKISQLQLRVDKQLPEPLLSSMSSSVNSADNIAQLQCRVDDPQHSVDDSLQLASPRLSSSFKSTDSTAQAHCRVDEPQISVDESLLPVDECEQLQLISPRLSSSVMSAQSQYRVDEPLLPVDEVLQLASSSLSSSLKSGDNIAQLLGVLDVHLPVDELLQLPSLILSSSVKSSDSIAQFQQKADADEMLQSSSLASSEKPATFKNWSSASDTITQFQQRANADESLPLPSSSLASSGKPATFMSTWSSAAESNSVFSGDEEIDDASFHDSIDLDDSWDLVDDEAIYMCAN</aaseq>

Gene Sequence

<dnaseqindica>1..84#214..276#1117..1243#1643..2040#2204..2380#2476..2592#2995..3174#3269..3315#3391..4285#ATGTCGTCGTCGTCTTCTTCCCGGAGGCAGCCGCCCTCCGCGGCCGCCTCGTCCAGCACCGCCGGTTCGTCTTCGTCGGCCAAGGTTGCTACTGCTCTGATTTTTCTCTCTCTCCGATGGTGCTTGGGCTTGGGGGGCGATTCGGTTTGGTTTGGTTTTGCACTGCGTGATTGGTGATCGTGACGTGCCGCTGGCTTGTTGTTGTGGTTGCAGGGGGAGGGGAAGGTGAGCACGGGGGATGATCTCCTGGACGCCCTCGTCGAGGTGTTCCCGCAGGTGAGTTTTTCGGTGCTCGAAACAAACTTACCCACCTCGATTAGACGTCCTTCACGATCGATCTTCGTGGTTCCAAAAGGACGCTGTTAACTTGGTCGTTTTATTTGATTTTTGTTTTCTTCAATGTTAGGCAAAAACATCACGATCGTTTCACTACTTTGTTTGTTTGAATCTAGGCCAAATTTAAGTTTTAGAACAAGGACTAGAAGGCAGTGCGCAGGTGTGGCATCGCTGGTTTTGTGCGGTTAGTTTAAGGATTCGTCAATCCAGCAATGCCTGTGTTGACAGAGTAATAACCTAGATTGAGGTGATGCGATATTCTTAGCGAAGAAGATACGGGTTGACTTTGTTTTTTTCCCTAAACAACACCACCTTTGTTTTCCTATCGCATTAAAAAAATTATATTTTTTTGTCTCCTTGGACCACTGCGCGATTTGTTTATCAACCACTTTCGCTTAATTGTATTCTCTGCACAGCAAAAAGCTCATCTCTTTTAAAACAGAGAAGATGTATGCTTGGTTGTTCAGATGCATGGATGTGATTCACACTATCATGCTGCATGTGTGCTTTCGTGTGAATAATCATAAATAATAATTTAAGCATTCAATTGTAGTACTATCTATCTTTTTTTTTTTTTTTGCTGACAATTTGTAGATTTCTAGGGGAAAAAAATCTCTGTTTGGAGATGTTTCGTGTGCACTTTGCCTGTTATTAGAAGTACTACCAGGATTAAATCTACAATTGTTTTTTACAGTTTACTTGTATGAAATTAGAAACTATAGGCCTTTCATTTACTCAAAACTCTTCCTACTAACCAATACCCTATTTTCATCTATGCAGTTGAATTTCTTAACACTGGTAGAAGTTTGCATGGAATATAAGAATGATATAGATGGTGCTGCGGATTATATTATCCATAATGTCCTTCCAAGTATCCCGGACAACAATGATGCACATGCAAATGAAGGTGCTCATATGAAAAGTAAACTTTGATTTTGCATTTTGAAGTTTTTCTAGTTAGTATTCCCTGGCACCTGTTTATACGCATACTAATCGCAAAATTTGTGCTATAACTTTTTATGTGTTATATATTAACTATATTTATGTTTTTTCTCTTCTCAAAAGTCAAAACATGTGTTTTAGTTTGCCTGCTTGTTGATACATTGAAAGTATGTTTTTGAGTAAACATGTCATTGTAAATTACTGCATGTGCTTGTGGGAGTGATCATAGCTTAAGTATCTTTGAATTTCCTTCTGCTAAATACTCATAGTTATATCACCCCTTCTTGTTTCCTTTTATACTCTTTTTTTATTGATAAAATCGGTTCCCAGCAATAACATGTGTTTAATAATAAATACTTTTTAGGGCCTGCTTCGGTGGATAATGATGCAGATTCAGTGCAGTCTTACTTAGCGAACAAATACACAGCTGAGCAGGAGGAGGAGGAAGAGGAAGAGGAAAAGGAAGAGGAGGAGGAAGAGGAGGAGGAGGAAGAGGAGGAGGAAGATGAAGATGATGATGATGAGGAGGAAGATGAAGATGATGAGGAGGAAGATGAAGATGACGAGGAGGAGGATAGACTTATGGAAGAAAATTCTGATTGTTTGGTTGCTATTGATCTGAATTCAAAACCTGGAACTTCAGCTTTTGATGATGATTTGGTAACCCATGACGATGGATTACCTGCTATGAACATACAGTCAAGCTACCCTGTTAGACTTGAGTTGCTTGACAATGCAATTGCTGATGAAATTGACAAGAAGGTAAACCAATTTCCTTTCTTCTTTTCATTACGAAGCAACACGATTTATCATATATCATGTGAAAATAGTATCCAAATAATAGTAGTACTGGCATTGTGACAATATGTTGCGTTTCCAATTACTTTACCTATTTGTCTTATTAATTAATTGATTTATGATGCAGGTTACTTTGATGTCAAACGTAACAGCGATAAACCAAATGCTAGAGGACATAAAGTTAAAAGAAGAAAAAACAAAACAAGCTGTGTTGGAAGCAACTCAAGCTGGCAATGATATTTTTGTTAAGGTGGAGGAGTTAAAAGAGATGACAATGCTCTCAACAGAAGAGAACGACAAAGTTGTACATATAACACTGGGAGTTTTATTTTCATACTTTTCTTTGTCTTACCAACTGAAACAATAGGACTGAATAGGACTGCTTAATGGAATATGTAGGTTGCAGGGGAGGTTTTCGCTGAGCAATCTATTCTAGCATCAGAAGCACATGGGCTTCAAGCTCGGTTGTCTAACATTTCTGAAGAAAGGAACAACTATGCCTTAATTATTGACGAGGTAAATTCGAATCGTCCTGTGATTTGTAGGAATGTAAATGTTTTAGTATGTTCTTATTAATGGTAAATCAACCAACAGAAAGCATTGTTTCTATAAAGAGAACAGCTTTTAGAAAGTTGTTACCATTCATCTCCTCTCACCCTAAGACATTTTTTTAAAAAAACAATAGATCTTGGCTGTATATATATTAAGTAGAATGAGGAGCACTCCATAAGAAACTGAAACAGTTCAGAAAATCAGGAAAAATATGTACCTAGTAGAAGAGAAGAAAATGACATTTCATGTCCTGGATCAATGTTCTTATTTTTGAACCATTGGATTATCTAAGTGGGTGATAATTATAGTATCTTGCTGAACTTCTTTAATATAGATTTTAATACACCTTGTTTGTGTGTTATGTAGATGCGCCATACTCTTCAAAACAGATTTACTGAAGCTGAAGTGGAGACTGTAGCAGCTGAGAAGAAGAAGGTTGAAAGGGAAACATTGGCTGAGAAAATGTTGAATGAACAAGAACTCATACTTGATGCTACAAAGGAAAGATCCAAGATGCTAGAACAGCAAGTGCGGGAGAATGCAAAGGTAACGTCAAGTTGTGTACATGAAAGATGGATATCAAGTGCAATATTTTGGATTCATGTTTTAGCAAACAACTAACTTGCATAATATGATGCAGCTGAGGGAGTTACTAATGGACCGAGGCCAAGTTGTGGATGCATTGCAGTAAGTTTTATGGAAAGTTTAATACATTTTTTTTGTTAGACGTGCACATCTCATACTCCACCTTGTATGTTTTAGGGGGGAAATGCTGGGAATCTTCGATAAAATTTCACAACTTCAACTCAGGGTTGATAAGCAACTTCCTGAACCCCTGCTATCAAGCATGTCCTCCTCAGTCAACTCAGCTGATAACATTGCACAGCTCCAGTGCAGAGTTGATGACCCACAGCATTCTGTTGATGATTCATTGCAACTAGCTTCACCTAGATTGTCCAGCTCATTCAAATCAACAGATAGCACTGCGCAAGCCCATTGTAGAGTTGATGAGCCACAAATTTCTGTTGATGAATCGCTGCTTCCTGTTGACGAGTGTGAGCAGCTGCAACTGATTTCACCAAGGTTATCTAGCTCAGTCATGTCTGCACAATCCCAATATAGAGTTGATGAACCGCTACTTCCTGTTGATGAGGTGTTGCAACTAGCTTCATCAAGCTTATCCAGTTCGCTCAAATCAGGAGATAACATCGCTCAACTTTTGGGAGTACTTGATGTGCATTTACCTGTTGATGAGTTACTGCAACTACCTTCATTGATCTTATCTAGCTCAGTGAAATCATCAGACAGCATTGCGCAGTTCCAACAAAAGGCTGATGCTGATGAGATGCTGCAATCATCTAGCTTAGCCAGCTCAGAGAAACCAGCAACTTTCAAGAATTGGTCATCTGCTTCAGACACCATTACACAGTTCCAGCAAAGGGCTAATGCTGATGAGTCGCTGCCGCTTCCTTCATCTAGCTTGGCCAGCTCAGGGAAACCAGCAACATTCATGAGTACTTGGTCATCTGCTGCAGAATCAAATTCAGTTTTCAGTGGTGATGAAGAGATTGATGATGCTTCCTTCCATGACAGTATTGATTTGGATGATAGCTGGGATTTAGTTGACGATGAAGCCATCTATATGTGTGCTAACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018107

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