BGIOSGA018206

From RiceWiki
Revision as of 02:31, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018206| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018206, complete gene.| tag = P0530H1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA018206

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018206, complete gene.

LocusTag

P0530H10.16

Ensembl Transcript ID

BGIOSGA018206-TA

Ensembl Protein ID

BGIOSGA018206-PA

Length

3303

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:18231708..18235010

Sequence Coding Region

18234956..18235010,18234669..18234751,18233895..18233971,18233474..18233564,18233157..18233210
,18232974..18233069,18232692..18232781,18232282..18232333,18232100..18232161
,18231915..18231995,18231708..18231833

Genome Context

<gbrowseImage1> name=IndicaChromosome05:18231708..18235010 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:18231708..18235010 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGGGGGTGAAGAAGAGAAGCCCTTCAACTTCCTCCAGATTCTGTGTGAGGGCGTCATAGCTGGTGGCACCGCGGGTGTGGTGGTGGAAACAGCTCTGTACCCGATTGATACGATAAAAACCAGGCTTCAGGCTGCTCGGGGAGGAAGTCAAATTCAATGGAAAGGATTGTATTCTGGATTAGCTGGAAATATTGCTGGTGTTCTCCCGGCTTCTGCTGTATTTGTGGGAATATACGAACCGACAAAAAGAAAACTACTGGAGACTTTTCCTGAAAATTTGAGTGCTGTTGCCCATTTTACTGCCGGGGCTATTGGAGGAATTGCGGCTTCTCTCATTCGCGTCCCCACAGAGGTTGTCAAACAAAGAATGCAAACAGGTCAATTCAGGTCTGCACCTGATGCTGTCCGTCTCATTGTTGGTAAAGAAGGATTCAGAGGTCTTTACGCTGGATATGGATCATTTTTACTTCGAGATCTGCCTTTTGATGCCATTCAATTCTGTATATATGAGCAACTTCGAATTGGTTACAAAATTGTGGCCAAGAGGGAGCTGAATGATCCAGAGAATGCACTTATTGGTGCTTTTGCTGGTGCCATTACTGGGGCTATAACAACACCACTCGATGTGATGAAGACGCGGTTGATGGTTCAGGGATCAGCGAACCAGTACTCCGGAATTGTAAGCTGCGCCCAGACAATCCTGAGGGAGGAAGGACCTGGGGCATTCTTGAAGGGGATCGAGCCGCGGGTGCTGTGGATTGGCATCGGCGGGTCCATCTTTTTCGGCGTGCTGGAGAAGACCAAGTCGATGCTCGCCGAGAGGAGGAGCCGCGAGCCACCAGCCGGGAAGGATGAGTGA</cdnaseq>

Protein Sequence

<aaseq>MAAGGEEEKPFNFLQILCEGVIAGGTAGVVVETALYPIDTIKTRLQAARGGSQIQWKGLYSGLAGNIAGVLPASAVFVGIYEPTKRKLLETFPENLSAVAHFTAGAIGGIAASLIRVPTEVVKQRMQTGQFRSAPDAVRLIVGKEGFRGLYAGYGSFLLRDLPFDAIQFCIYEQLRIGYKIVAKRELNDPENALIGAFAGAITGAITTPLDVMKTRLMVQGSANQYSGIVSCAQTILREEGPGAFLKGIEPRVLWIGIGGSIFFGVLEKTKSMLAERRSREPPAGKDE</aaseq>

Gene Sequence

<dnaseqindica>1..55#260..342#1040..1116#1447..1537#1801..1854#1942..2037#2230..2319#2678..2729#2850..2911#3016..3096#3178..3303#ATGGCGGCGGGGGGTGAAGAAGAGAAGCCCTTCAACTTCCTCCAGATTCTGTGTGGTGCGTCAACTCCTCCCCTCGTTTGCTTCATCCTCCTCCTCCTCTGCCCATGGATGGTACAGAGCACAGAGTTATTAGATAGATAGCCACATTTTTCTTCTTGTTCTTGTTCTCTCTGTCTCTCTGAATTTTGTGTGAAATTACTCCGTTTCATTGGTCCCGCGATGCAATGCGAATTCGATTATTTCCCCGTGTCTTCTGCAGAGGGCGTCATAGCTGGTGGCACCGCGGGTGTGGTGGTGGAAACAGCTCTGTACCCGATTGATACGATAAAAACCAGGCTTCAGGTGATCCAATTTTCGCATCATGCTGTATTGCAAGTATCCACTTTTGATCATCATATATAAAGCATTTACTCGTGACGATGCTATTTATAGACTGTGGAAAAATTTGTTAGTTAATTTACATTGAAATAGGCCCCAGAGTTCATTCCCAAGAAGGGATCTTATTTATACTGAAATTACCTGGAGTAACCAGATAATTTAAGCAAATGTCTAGCAATGACAACCTTTTCTTATCTTTCTCTTCAATTGGTCCAACAAGGACTTAGATTCAAGCGAGTAGTAATTACATGAATCATGTGAGGCATGTCATGTTTTGGCATGATTGTAAGAACCCTATAGTCCTCTAGGCTCTAACCTATGCCAGGTAACTAGAGAAAATTTAAGGAAGTATTTGCAGTATTTTGGTATTAAAAAAGATGCTTATACAGAGAGGATTGATTCAGAACTTGTGCTCAAATGGAAAAATGTGAGGAGGGTGGATCAACTAAGAGCATTCGCTGTGTTTATGCATAAATGTCGGGTTTCATGTGGATGTGGTCCTGAAGCAACCCCAAATTCTAATATATTTCTAGCAAATGCATGTCTCAATTATAATTTATATTATCTTGTGCTTCCAGTTTCTTGTGTGAATATGGTATGCTTGCTATTAAATTTGAATAGCAACCTGTACATGTTGTCTGAAGTTTGTGATCTTCCATAGGCTGCTCGGGGAGGAAGTCAAATTCAATGGAAAGGATTGTATTCTGGATTAGCTGGAAATATTGCTGGTGTTCTCCCGTAAGTACAAAATACAAAGCATTCAGTTTCTTTTCTTTTCCTCCTGGCATCGTGATATAACATGTTATTATCAGTAAATATGTTCATCATTTTGCATCATTTATGTTACAACCTAACATAGACAAGATACTGAATATGATTCTGGGGTCTGATGCTATGATTGCTTTTACTTTCCTTCCAAATTGATATTGTTAAATTAAGTACTGTTGTTTATCTTTGGCTAGACCCCTTCTCAGGTAATAATCCTTAGCTTCACTTTTTCAGGCTCCATAACATGGGAATCATTGCATTCTCTTTCCATCATATTGTTTCTTCTCTATTTGCTTGTAGGGCTTCTGCTGTATTTGTGGGAATATACGAACCGACAAAAAGAAAACTACTGGAGACTTTTCCTGAAAATTTGAGTGCTGTTGCCCATTTTGTAAGTTAACATGCATTTAACATGTTTTTGCACTAGTTGATTGCACGTAGAATGTTGATCAGGCTGTACATCGTGCTGTTTATTTTGTATAATCTGTTTTTTTTTGCGGGGAATATTTTGTATAATCTGTTAAGTCTCTAGAACTTCTAATTCGTCAGTTACAGCATTGAAGTATCAACCATGCTGTTTGATGTCGTTTTAATGCTTAATCTTCAGAGCATGTTGCTTTCTATCACTGCCTTTTCTAAATGAGAATGCTACAGACTGCCGGGGCTATTGGAGGAATTGCGGCTTCTCTCATTCGCGTCCCCACAGAGGTCAGTTTTTCTATTCTGAACTCTTTCACATTTTTCTTGATGAATTTAATGTTGTTTTACACTGAAAATTGATTGCATTCCTTTCAGGTTGTCAAACAAAGAATGCAAACAGGTCAATTCAGGTCTGCACCTGATGCTGTCCGTCTCATTGTTGGTAAAGAAGGATTCAGAGGTCTTTACGCTGTATGTATCTTCTGACCTCATATATGGTGGAACCTGTATTTAGCCGATTCAACTCTAATTTTTGTTATCCCTGTATATTTCAGGAAAAATAATTATTTGAATCTGTTTAATATGCCTTTTTAATTGAATTGTTGTTACAATGGAAAAAAAACTCATTGCCTTCCTTGTCATACTGTTTCTTTTTGTTTGTAGGGATATGGATCATTTTTACTTCGAGATCTGCCTTTTGATGCCATTCAATTCTGTATATATGAGCAACTTCGAATTGGTTACAAAATTGTGGTACCCATCTTAGCCTCTGTCTTGATGAGAACCATATTTTACTTCTGGTTAGCAATCCTTACTAGGCCTCAGACGACCTCAATATAAATGTAGGATTGAGGATTCACACCTTCATACATGTTGTCTATGGACGAGTCTTGTATCTTGTTAAGTACTAATTGTGGGCATCAGCATCACGCTGCTTTGCCAATCATTTTTGTGCTATTTGCATCAAATACTATAACTTGATTAGCTGCCCAAAGTGAGATACTACTATTAATTGATAATCCTTGTGACATTTTCTGACTCCACCATGAACTGTAACTGTAATTTCAAGAAATTTATGGATTTACTACCACCTTTTCACTTGTCTGTTCAGGCCAAGAGGGAGCTGAATGATCCAGAGAATGCACTTATTGGTGCTTTTGCTGGTAGGACTAAATTCTGTTTCTTCCTCACTTTCTAATCCTTGTTGGACAATTTTTCTGTTCTTATGTTGCCGTCCTTCTTTTGTTTACCTGCTTCTATAACCCATCATTTCTTTCTGCTAGGTGCCATTACTGGGGCTATAACAACACCACTCGATGTGATGAAGACGCGGTTGATGGTTCAGGTGGATCCTTTTGTATCAAAATCCATCCACAGAATAACACATCATTCCTTTCAACCCCTGTTGGTATCGCTGACCCCATATATTTCTTTGGACCGCAATCGCAGGGATCAGCGAACCAGTACTCCGGAATTGTAAGCTGCGCCCAGACAATCCTGAGGGAGGAAGGACCTGGGGCATTCTTGAAGGTAGCAAAATTTTTCCTTTCGCCTGCTGATGGTGGTGGGTGCACTGGGGTTGTGATTGAACTTGGTGGCTGGTGATGGCAGGGGATCGAGCCGCGGGTGCTGTGGATTGGCATCGGCGGGTCCATCTTTTTCGGCGTGCTGGAGAAGACCAAGTCGATGCTCGCCGAGAGGAGGAGCCGCGAGCCACCAGCCGGGAAGGATGAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018206