BGIOSGA018215

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Revision as of 02:32, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018215| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018215, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA018215

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018215, complete gene.

LocusTag

OSJNBA0009L15.1

Ensembl Transcript ID

BGIOSGA018215-TA

Ensembl Protein ID

BGIOSGA018215-PA

Length

3598

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:17902414..17906011

Sequence Coding Region

17905897..17906011,17905433..17905483,17905181..17905356,17904994..17905071,17904792..17904903
,17904563..17904647,17904433..17904484,17904300..17904361,17904065..17904180
,17903824..17903945,17903573..17903635,17903428..17903485,17903103..17903176
,17902769..17902814,17902414..17902553

Genome Context

<gbrowseImage1> name=IndicaChromosome05:17902414..17906011 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:17902414..17906011 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGAGAGAGGATGAGAAGGCTGACGCAATGGAGATTGATGGGCAGCATCAGCAAGTGGCCAACACCGCCGTACCAGATGGCTTCAATGCTGATTACCTCAGGATCTACTATGGAAAGCTCTTCCCTCATGTTGATTTCTTCAAGTGGCTTTCATATGGAAATGACGGGAAACATCCAGGATGTGATCAGTCGTATGTTGGACGTCGAGAGTTCTCATTTACACTAGAGAATGACATCTACGTTCGTTTCCAGTCCTTTGATAGCGTGGCTGAAATGGAGAACTCTATCAAGGAAAAGTGCCCTTTCAAGATTGATATTGGACCTGTATATAGTGTAGATCCTGCAAAGCGGCATGCCTATGCTCAATCAGGCAACAACGTCTTTGTGCCAGTTGAGAGAGAACTTATTTTCGATATAGATATATCAGATTACGATGATGTTCGCTATTGCTGCTCTGGAGCTGATGTCTGCATGGAGTGCTGGCCTTTAATGACCATTGCTATCAAAATCTTGGATGCTTCACTTAGAGATGATTTTGGTTTCAATCACATATTGTGGGTATATAGTGGTCGTCGTGGTGTCCATTGCTGGGTTTGTGATAGTAGAGCAAGAAAGCTCAACAACGAACAAAGGGCTGCAATTGCTGATTATTTTCGCGTCTACAAGGGTGGTGAAAATACGATGAAGAAAGTTTCATTGACTGGAGCTGTTCTCCATCCTTTCCTTGCACGGTCATACACTGATGTTCTGAAAGGCTTCTTTGAAGATAAGCTACTACTTAGCCAACAACTATTTGCATCTGAGGAGAGATATCAGAAAATACTTGATCTTATCCCTGATGAAAATGTTGCTAGTGAGCTCCATGATAAGTGGCAAGGAAACAGACGATCTTCTATTTCAAAGGAAGATGTAAATGCTACCAGGTGGGAGCAACTAAAGTCAACCTTGCAGTCAGGAAAACACAAGGGGCTTCGAAGATGTATAGAAGAGATTGTCTTCTCATACACATATCCTAGACTTGATATGGAGGTTTCTAAGCACATGAATCATTTGCTGAAAGCACCCTTTTGCATACACCCGAAGACAGGCCGTGTTTGTGTTCCAATCGATCCAAATAACTGTGATGATTTTGATCCTACGACAGTTCCAACTCTGTCACAGGTTTTTCAGGGCATCGTTTCTGCAACCATTGCTGAAAGCCTGCAAGGAGGAATTAGAAAGCTCATACAATGCCAAGCTCCAGCAGTCCAAGAATACCTTGACTTGGTAAAATTCACTCAACTTCCAGCTGATCTTACCAACCTAGTGCCCCATGAAAAGCTTCTTCTCCATGAGACGAACCACTGA</cdnaseq>

Protein Sequence

<aaseq>MAREDEKADAMEIDGQHQQVANTAVPDGFNADYLRIYYGKLFPHVDFFKWLSYGNDGKHPGCDQSYVGRREFSFTLENDIYVRFQSFDSVAEMENSIKEKCPFKIDIGPVYSVDPAKRHAYAQSGNNVFVPVERELIFDIDISDYDDVRYCCSGADVCMECWPLMTIAIKILDASLRDDFGFNHILWVYSGRRGVHCWVCDSRARKLNNEQRAAIADYFRVYKGGENTMKKVSLTGAVLHPFLARSYTDVLKGFFEDKLLLSQQLFASEERYQKILDLIPDENVASELHDKWQGNRRSSISKEDVNATRWEQLKSTLQSGKHKGLRRCIEEIVFSYTYPRLDMEVSKHMNHLLKAPFCIHPKTGRVCVPIDPNNCDDFDPTTVPTLSQVFQGIVSATIAESLQGGIRKLIQCQAPAVQEYLDLVKFTQLPADLTNLVPHEKLLLHETNH</aaseq>

Gene Sequence

<dnaseqindica>1..115#529..579#656..831#941..1018#1109..1220#1365..1449#1528..1579#1651..1712#1832..1947#2067..2188#2377..2439#2527..2584#2836..2909#3198..3243#3459..3598#ATGGCGAGAGAGGATGAGAAGGCTGACGCAATGGAGATTGATGGGCAGCATCAGCAAGTGGCCAACACCGCCGTACCAGATGGCTTCAATGCTGATTACCTCAGGATCTACTATGGTACAGTAGTGCTTCCCTTTTTCTTCTAATCCGCCACTGAAATTTAAGAAACTAGGCACCAGACAGTGTGCTCTTTTTGCTGATTATTTTCTCTTTGTCTTGGATAATCCGCAGAAAGCTGCGATCTTGAAGCAAAATATTTTTCTAGAACACACTGGAGCAAAATATTTTGGCATATATATACACTGTAATAGTGGTTGTAGGTAATCTATATGCTTTCTCCATGGAAAAATGTCGCAACTTCTTGCAACTGCAGTCCAGAATAATAGTTATTGGTCTGTGCAGTTCAAATGGTTTTAACTAAAAGATGCTTAATTTAATATCACAGTTGATCTGCCATATAATTTCCACTTAAACAATTGTGATGGCCAACTGCCAGTGCTAATGGTTTTGTATGTATGCTACAATTGCAGGAAAGCTCTTCCCTCATGTTGATTTCTTCAAGTGGCTTTCATATGGAAATGGTCTGTTGTTGTTGGTTCAGGATCTAGTTGTTTACTAATTGTTTCATCTATATAATACGAATTTGTCCTTTTTTAGACGGGAAACATCCAGGATGTGATCAGTCGTATGTTGGACGTCGAGAGTTCTCATTTACACTAGAGAATGACATCTACGTTCGTTTCCAGTCCTTTGATAGCGTGGCTGAAATGGAGAACTCTATCAAGGAAAAGTGCCCTTTCAAGATTGATATTGGACCTGTATATAGTGTAGATGTATGTTGTGTAATCACTTAACTTGGACATTATTTTTTTTATGTGAGTTTGATTTTCCGCATTAAGCTCTGTTTTTTCAATATCTTGATGAAAACTGTTTATTTTGTAGCCTGCAAAGCGGCATGCCTATGCTCAATCAGGCAACAACGTCTTTGTGCCAGTTGAGAGAGAACTTATTTTCGATATAGTAAGAAACCTGCAAAATTTCTCCTGTGGATTTTATTTGTATTTTTCATCAAGCATCTGTTCCAAGCTGTGAGGCATTTCAACATCACAGGATATATCAGATTACGATGATGTTCGCTATTGCTGCTCTGGAGCTGATGTCTGCATGGAGTGCTGGCCTTTAATGACCATTGCTATCAAAATCTTGGATGCTTCACTTAGAGGCATGTTGTTTTGCAATGCAATTAATTAAACACACATGCAAACACTCGCTTTTATTTCAGTTTAATTGACTTGAATTGCAGATCTTTAGTCAACTATTTTCTTGGTTAGTTTGACTTGTAACAATTGAAAGTATGTGTTTACAGATGATTTTGGTTTCAATCACATATTGTGGGTATATAGTGGTCGTCGTGGTGTCCATTGCTGGGTTTGTGATAGTAGAGCAAGAAAGTATGCATGATGTTTTTCCCTTTTTCATTTCTCCATTTAGTTTGGTGATCCTAAAATGCTCTGGTACTTTCCTGTTAGGCTCAACAACGAACAAAGGGCTGCAATTGCTGATTATTTTCGCGTCTACAAGGTGGTATTCCTTTATTCATGATCCTAGATGTCGTTTTGTTGCTGAAATCTTCCTGTATGGATCTTTTGCAGGGTGGTGAAAATACGATGAAGAAAGTTTCATTGACTGGAGCTGTTCTCCATCCTTTCCTTGCGTATGTCTGAATGATCTCAGTTCCTTGTTTTTCAATCATAAGTTGAAATTGTATATGTTTTATCAGTACAAATTGAAATATAGCCAAATAGGCTGTAATGAAACTCTATTTTCCTACAGACGGTCATACACTGATGTTCTGAAAGGCTTCTTTGAAGATAAGCTACTACTTAGCCAACAACTATTTGCATCTGAGGAGAGATATCAGAAAATACTTGATCTTATCCCTGATGAAAGTAAGAATGCAAACCTTAACTAGAACAATATATTTTAGTATCATCACTGCTATCAAACCATTTCTCATTTGTCAAGTCTTGAATGTCTTCAATCATTGTAAAGTGTGTGTCATTTCTAGATGTTGCTAGTGAGCTCCATGATAAGTGGCAAGGAAACAGACGATCTTCTATTTCAAAGGAAGATGTAAATGCTACCAGGTGGGAGCAACTAAAGTCAACCTTGCAGTCAGGAAAACACAAGGTCCATGCATAATCTCTCGCAATCCTACTTAATTTTATTTGCACATTTACTGGTGTATCAGTTTTAATCATATCGAGTATTGTATTCTCGAGGTTTCATCACAATGTTACATGTGGGATTGGTTGCTAATTTTCATTCTATTTTGTTGAATGCACAATGATGTTTTTTTTTTCATGTTTCTTCCACAGGGGCTTCGAAGATGTATAGAAGAGATTGTCTTCTCATACACATATCCTAGACTTGATATGGAGGTAAAAGCAAAACGATCAACAGCACATGTTTGCAGCAAGTCATAAATTCATTTTCTGATTCCTATTCGACATTCTGGTGCATATCAGGTTTCTAAGCACATGAATCATTTGCTGAAAGCACCCTTTTGCATACACCCGAAGACAGGTTAGACCCAAGTATATTTCCTATTTTTTCATCTAATGAATGAAGATACTTGTTTGCACTAGAAACTGTTTTTGTTGGCTGTCCGTGTGTATACACTTCGTGTATCCGTTGGAAATCTCTAATGCAAATGTTCCTTGAGTGACACATTTTTCACATTTATATGCATTCATTTCATGCTTACACTTATACGTAAAATATGTTCTGCCTAATGAGTTCTAAGTTCTAACAATTGTTTTGAAATCTTTCCCTAGGCCGTGTTTGTGTTCCAATCGATCCAAATAACTGTGATGATTTTGATCCTACGACAGTTCCAACTCTGTCACAGGTGTGTCCTTAGAGCCAAGCATTAAAAAAAACAATATTCTGAGATCTAATTTACCTTTGGAAGCATCATTATGCTAAACTGACTTGTTGAAACTGTTGAACTTAACCAGCTTTTGGGTGAGCTCAATGCAGCTGGTCTTCGTACTGATTCTGAAAACGGCAAGTGATAAATTCTTCACTTTTAGGAATCCTGTGTTTAACTATTTCATCCTAAAACTTTCAGTGATCTTTTGATAATCCTTTAATGGACTACAGATTGGGAAAGAACATCTCTTGAAAAATCTATCAGGTTTTTCAGGGCATCGTTTCTGCAACCATTGCTGAAAGCCTGCAAGGTATGCAGTATTTCCTTCTACATTTCTATGGCAGGAAACTGGATATGCTTGTTTAGTTCCCAGTCAATCTCTTCCATATCTTAAACTGAATGGATCGGGCCCTATACTCGTATCTACTCTCGCTACAGCGCTTTGCTTGCAAGAAATCGTCTGTGTTCTTCTGGTTCCATAGTTTTCCAGGGTCAAGTCTCAGTTTCTGCCTTGTAATGTTGCAGGAGGAATTAGAAAGCTCATACAATGCCAAGCTCCAGCAGTCCAAGAATACCTTGACTTGGTAAAATTCACTCAACTTCCAGCTGATCTTACCAACCTAGTGCCCCATGAAAAGCTTCTTCTCCATGAGACGAACCACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018215

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA018215&oldid=46971"