BGIOSGA018278

From RiceWiki
Revision as of 02:33, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018278| Description = BGIOSGA018278| Definition = Oryza sativa Indica Group BGIOSGA018278, complete gene.| tag = | tid = BGIOSGA018278-TA|...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA018278

Description

BGIOSGA018278

Definition

Oryza sativa Indica Group BGIOSGA018278, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA018278-TA

Ensembl Protein ID

BGIOSGA018278-PA

Length

3641

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:16288868..16292508

Sequence Coding Region

16292446..16292508,16291799..16291906,16291592..16291669,16290929..16291036,16290744..16290845
,16289986..16290041,16289672..16289806,16289502..16289595,16289355..16289414
,16289198..16289277,16288868..16289033

Genome Context

<gbrowseImage1> name=IndicaChromosome05:16288868..16292508 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:16288868..16292508 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCTCATCCTGTAGCAGATCTCATTCTTTAAGTGAGGCTGAAACAACAAAAAATGCAAAAATTAAGCTCCTTTTCCANACTGGCTTTGATGAGGCAGAACTTAGGAGCTACACATCAGTTATCCATGCAACGTCTATCAGACAATTAAAGTATGCAATACTGGAAAGGATACTATATGAAGGAGCAAAAGAACTCTCACAAGTGGAATCAGATTCCTCAAAGTATGTTATATCCCCAGATAACCAGGAAATTGGAGAAAAACTATCAGATATTGATGGCAGGTTGGATTATCCACTGCTGAACAAAGAACTTGTACTCGATGTAAAAAGGTTATGGCAAGACCCAGCCATTCAGGAAACTTACTTACGTGGAAGTATTCTGCAACTTCCTGATTGTGCACAATACTTCATGGAAAATTTGGATCGATTAGCCGAAGCAGGTTATGTGCCAACAAAGGAGGATGTGCTTTATGCAAGAGTACGGACAAATGGTGTTGTACAAATACAATTTAGTCCTGTTGGAGAAAACAAAAGAGGTGGAGAGGTATATAGGTTGTATGATGTAGGAGGCCAGAGGAATGAGAGGAGAAAGTGGATTCATCTTTTTGAAGGTGTTAATGCGGTAATCTTTTGTGCTGCCATTAGCGAATATGATCAGATGCTATTTGAAGATGAGACAAAAAACAGAATGATGGAGACCAAGGAACTCTTTGACTGGGTTTTAAAGCAAAGATGTTTTGAGAAAACATCATTCATTCTGTTTCTCAACAAATTTGATATATTCGAGAAGAAAATACAAAAGGTTCCTTTAAGTGTGTGCGAGTGGTTTAAAGACTACCAGCCTATTGCACCTGGGAAACAGGAGGTTGAACATGCATATGAGTTTGTCAAGAAGAAGTTTGAAGAGCTCTACTTCCAGAGCAGCAAGCCTGACCGTGTGGACCGCGTCTTCAAAATCTACAGAACTACGGCCCTAGACCAGAAACTTGTAAAGAAGACATTCAAGTTGATTGATGAGAGCATGAGACGCTCCAGGGAAGGAACTTGA</cdnaseq>

Protein Sequence

<aaseq>MGSSCSRSHSLSEAETTKNAKIKLLFXTGFDEAELRSYTSVIHATSIRQLKYAILERILYEGAKELSQVESDSSKYVISPDNQEIGEKLSDIDGRLDYPLLNKELVLDVKRLWQDPAIQETYLRGSILQLPDCAQYFMENLDRLAEAGYVPTKEDVLYARVRTNGVVQIQFSPVGENKRGGEVYRLYDVGGQRNERRKWIHLFEGVNAVIFCAAISEYDQMLFEDETKNRMMETKELFDWVLKQRCFEKTSFILFLNKFDIFEKKIQKVPLSVCEWFKDYQPIAPGKQEVEHAYEFVKKKFEELYFQSSKPDRVDRVFKIYRTTALDQKLVKKTFKLIDESMRRSREGT</aaseq>

Gene Sequence

<dnaseqindica>1..63#603..710#840..917#1473..1580#1664..1765#2468..2523#2703..2837#2914..3007#3095..3154#3232..3311#3476..3641#ATGGGCTCATCCTGTAGCAGATCTCATTCTTTAAGTGAGGCTGAAACAACAAAAAATGCAAAAGTAAGTTAGCACTCGGACTTACTGAACAAGTAAATGCTAACTCAATTCTTGATTTGAGAGTTGCCACATTTGGTTTCTTCTAATTCAGCTGGTAACAGTCTGCAGACATTGACAGGCGAATTTTGCAAGAGACAAAAGCAGAGCAACACATCCACAAGCTCTTACTTCTTGGTATTGCTAACTTTCCCAAATTTAAGTGGTCATTTTCCTTGTCACAATTATCTGCGCTACCTTTAGTATCTATTGGTTCAGAAAATTAATTGTTTCTGTTGTTCCTATTTACCTCTATAAAAAAACCTTTCTCATGTTATTTCCAAAAAAAAAGAAGATAAATAAATGTATCCTAGAAAATTTTAGTTTGAACTTGTTCTCAATGTGGATCCATCCTTCTTTCTCTCTCTCAATTGCTTCTGTTTTAAGGTGCGGGAGAATCAGGGAAGTCTCCGATATTTAAACAGGTGATGAATGTTATATTCCATGGAGAATCATAATCCGTACGCCGCTAGTTAGTCTGATGTATTCTTACTGTTCACCTGCAGATTAAGCTCCTTTTCCANACTGGCTTTGATGAGGCAGAACTTAGGAGCTACACATCAGTTATCCATGCAACGTCTATCAGACAATTAAAGTATGCAATACTGGAAAGGGTGTGTCTTTTTTTTCTTATTGCAAAGTGGGGATTATGTAGGAGAGTCGACTAGGGATTTGTATTCTGTTCATAAGGAAATGCGTTCATACTTTTCCTTTTTGTCGAGTAATGTGTTAAATGTTAACAGATACTATATGAAGGAGCAAAAGAACTCTCACAAGTGGAATCAGATTCCTCAAAGTATGTTATATCCCCAGATAACCAGGTTTGTGCTTACTCTTTACTCAACAGTTAAAGCTAAATCTGTGCATATGAACATGTCTTGTTAAATCTGGGAATACAAACATTTTGATTTGCAACACTTTCTGTTGTAGTCAAGCTGCTCGGCTCTATGTTTTAACCTGTTAAGACCTTGTAGACTGTGCTCGGCTCTATTGTAGTCTTATATTTTACACGGTCATTCTATAATGAAAACTTGAAAAAGATATCTATTGAACCGTACAATGTACTGAACAAAGTAGAAAAGAACAATGAGATTTTGTAACATTTATTCTTCCTTGTTTATTTGATTGCTTCAGACAATTGTTGATATGCTAAAAATAACTTGGTATCAAATGTGGGTGTTATAAGATTCAATTTTTTTCTCAACCAGGTTAAAAAAAGTATACCTTTGTGCATTTACCTTGTTCCGTTGCTTTGGAACTTTAAAGGAAAACTGACTTTTCTTAGGCATTGAAAGACAAATATCACCAGTTTCACACTGTACACCTTACCAACCAATTTTGTTTCTTAGATGTCATTTACTTTGTCATATCATCAGGAAATTGGAGAAAAACTATCAGATATTGATGGCAGGTTGGATTATCCACTGCTGAACAAAGAACTTGTACTCGATGTAAAAAGGTTATGGCAAGACCCAGCCATTCAGGTGAAAACAAATAGCCATTCAAATCTTTTGAAGTTATATAGTTTTCCTGGCCAGGTGTGCTGAAGCAATGCTCTATACTGTAGGAAACTTACTTACGTGGAAGTATTCTGCAACTTCCTGATTGTGCACAATACTTCATGGAAAATTTGGATCGATTAGCCGAAGCAGGTTATGTGCCAACAAAGGTGTGCTGTCCATGTTCATAGACAATTATTTACATATTCTCAGATATTTGTGCTGACACCATTTCATGTTGATTTTTAGTCTACTTAGTCAGAGGTTGTCAAATGGTTAACTATGTGTACTGAGTCAGAGGTTGCCAAATAGTTTTAAAAGATGGGCATATGTTTATCCTTATCTTTTAAATAATATTGGAGGCTATCCTTTAAAATTCAATATTAGGGAGGAGAAACTATTATTCTACCGTTATTACGCAGTCTACATAACGAAGGTAAAAAATGTCCCTGTGAAACATAGGGTGCAAAACTGCTGTGAATAAAACTCTACTTATCTAAGCACCTTGAGCTTTTGAGTTCCCACATATTAATCTTATGACACTAGCATATATTTTTTTTGTTCAGTTCCTTCAATAAGTTGCAAACCACAAATATGATCACTGTACCATCCACTTTTGCAACCATTTCCCGTCATTTCTTAAGCATAGAAAATTGTTTGTCACTTGTTTAAGTCCACACTGCATGAAAATTCCAATTAACTTTGTGTGTGCTAAGTGAAGATATGACTCCATATTTCTGCATTTAGCAGTCTGATGGATAATTTGTGATTGTACCTTGTCTAATGGTTCGTTTGAAAGGCTGGTAGTTGATCTTCCATACTTAAGAATGCTTGCAGTATTATAGTTGTCAATATTATGAGTCATTTTGCAGGAGGATGTGCTTTATGCAAGAGTACGGACAAATGGTGTTGTACAAATACAATTTAGGTAATCTGCTGACACTATTTTTTGCACATTTTTTTGCTGGTTGCTCTACTATGTACAGAACGACAAGTTGAAGTCCTTTTTTTCTCCCTTTTCACTTCTAAGATATGACCTGAGAGGTTCTGAATGTAGCTGTTATAAGATGAGTTGAATCATCTAGTTAACTGGGTTTCTTTCTGCAGTCCTGTTGGAGAAAACAAAAGAGGTGGAGAGGTATATAGGTTGTATGATGTAGGAGGCCAGAGGAATGAGAGGAGAAAGTGGATTCATCTTTTTGAAGGTGTTAATGCGGTAATCTTTTGTGCTGCCATTAGCGAGTAAGTACAATTTTTTTGATTGTTGAACTTATCCTAATCTGCTAAGTTCTTCTCATAGGCTTCTTGTTCATTTCAGATATGATCAGATGCTATTTGAAGATGAGACAAAAAACAGAATGATGGAGACCAAGGAACTCTTTGACTGGGTTTTAAAGCAAAGATGTTTTGAGGTCTGCATGCATCCATTTCTGCAACCTTTGTGCTCATGCTTTTTTTTCTCATTTTGAAACTAATTACGGTGCTATATTGACCATCAGAAAACATCATTCATTCTGTTTCTCAACAAATTTGATATATTCGAGAAGAAAATACAAAAGGTAAGGCCTGCTCTTTGTACCAATGCATAGTTTAGTACTAAATGTTACCAACATTTATGTTTTCGCTGGTTACGTAGGTTCCTTTAAGTGTGTGCGAGTGGTTTAAAGACTACCAGCCTATTGCACCTGGGAAACAGGAGGTTGAACATGCATATGAGTGAGTGCACTACTCGCCCTCTCAGATGAACATGGGCATTTGGCCATTTGTAATGTTGCTGCATGGTGCACTTATATGCCTTGATAAGTTTTTCCATTCTAATGTTATATAGTATCAAACGTTCATCATTACTGTGGCTTATGGTCTGGAGTGACGTTTTACAGGTTTGTCAAGAAGAAGTTTGAAGAGCTCTACTTCCAGAGCAGCAAGCCTGACCGTGTGGACCGCGTCTTCAAAATCTACAGAACTACGGCCCTAGACCAGAAACTTGTAAAGAAGACATTCAAGTTGATTGATGAGAGCATGAGACGCTCCAGGGAAGGAACTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018278

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA018278&oldid=47034"