BGIOSGA018283

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Revision as of 02:33, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018283| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018283, complete gene.| tag = OsI_194...")
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Gene Name

BGIOSGA018283

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018283, complete gene.

LocusTag

OsI_19498

Ensembl Transcript ID

BGIOSGA018283-TA

Ensembl Protein ID

BGIOSGA018283-PA

Length

5200

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:16230238..16235437

Sequence Coding Region

16235310..16235437,16235050..16235188,16234906..16234963,16232866..16232935,16232500..16232638
,16232356..16232413,16231566..16231608,16231352..16231400,16231174..16231254
,16230238..16231083

Genome Context

<gbrowseImage1> name=IndicaChromosome05:16230238..16235437 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:16230238..16235437 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCTGCTACAGTTTGGAGGTACCTTGGCTCCCAAACTTGGGGAAAAACCTCAGCTGTTGCCCAGGTCACCTGCACTTACAAGAGTTATTTATGCTGATCCAAGATTTCTGGTGTCAAAAAGTGGTAGTGGAGGCAGGCTTAAACACCTTGTATCACCTACTGCTAGTTTACAATCATGGACATCTTCTCGACTATTTAACCATGCACCATCACCGAGATTTCGCCATCGAAGGAGTTCAAGGTTCATTGTCAGAGCTGATGCTGATTTCTATTCCACACTTGGTGTTTCAAGAAATGCTAGTAAATCTGAAATCAAGAGTGCTAGTATATTGAAGGTTGAAGCTTTGTGGGTATCCAGCAAGTATTTCAATGGCGTTGCTACAGTTTGGAGTAGTGGAGGCAGGCTTAAACACCTTGTATCACCTACTGCTAGTTTACAATCACGGACATCTTCTCGACTATTTAACCATGCACCATCACCGAGATTTCGCCATCGAAGGAGTTCAAGGTTCATTGTCAGAGCTGATGCTGATTTCTATTCCACACTTGGTGTTTCAAGAAATGCTAGTAAATCTGAAATCAAGAGTGCCTATAGGAAGCTTGCTAGGAGCTACCATCCTGATGTGAACAAAGATCCTGGTGCTGAACAAAAGTTCAAGGATATTAGCAATGCTTATGAGGTTTTGTCTGATGATGAGAAGCGATCAATCTATGATAAATATGGAGAAGCTGGTTTGAAGGGTGCTGGAATGGGAACAGGAGATTACTCAAACCCATTCGATCTCTTTGAATCATTATTCGAAGGCTTTGGTGGAATGGGGGGAATGGGAGGCCGTGCTGCTCGGAACAGACCAATGCAGGGTGATGATGAGGCCTACAATCTGGTACTCAATTTCAAGGAAGCGGTGTTTGGTGTAGAGAAAGAAATTGAGATCACCAGACTGGAAGGCTGTAATACATGTGATGGAACTGGTGCCAAGCCTGGAACGAAACCAACCACATGCAAAACATGTGGAGGACAGGGACAAGTGGTCTCCTCAACAAGAACGCCACTTGGAATATTCCAGCAGGTCTCCACCTGCAATACTTGCGGAGGCACTGGTGAATTCTCTACCCCGTGCAACACTTGTGGGGGTGATGGCCGAGTGCGGAAGACAAAAAGGATCAGTCTAAAGGTTCCTGCTGGTGTTGATTCTGGAAGCAGATTGAGGGTCCGGTCTGAGGGGAATGCTGGGCGGAGAGGAGGCCCTCCTGGAGATCTTTATGTGTTTATTGATGTTCTCTCTGATCCTGTTCTTAAGCGAGATGGGACAAACATTCTATACACATGCAAAGTTTCATATATTGACGCAATTCTTGGGACAACCGTCAAGGTTCCCACTGTTGATGGGATGGTTGACCTGAAGATCCCCTCCGGTACCCAGCCAGGCACAACGTTAGTGATGTCCAAGAAAGGTGTCCCACTCCTCGGGAAGTCAAATGCTCGTGGAGACCAGCTAGTGCGTGTGCAGGTCGAGATTCCAAAGCGTCTGAGCAGCGACGAGAGGAAGCTGATTGAAGAACTTGCAAACCTAAACAAGGCTCAAACAGCAAACAGCAGGAGATAA</cdnaseq>

Protein Sequence

<aaseq>MALLQFGGTLAPKLGEKPQLLPRSPALTRVIYADPRFLVSKSGSGGRLKHLVSPTASLQSWTSSRLFNHAPSPRFRHRRSSRFIVRADADFYSTLGVSRNASKSEIKSASILKVEALWVSSKYFNGVATVWSSGGRLKHLVSPTASLQSRTSSRLFNHAPSPRFRHRRSSRFIVRADADFYSTLGVSRNASKSEIKSAYRKLARSYHPDVNKDPGAEQKFKDISNAYEVLSDDEKRSIYDKYGEAGLKGAGMGTGDYSNPFDLFESLFEGFGGMGGMGGRAARNRPMQGDDEAYNLVLNFKEAVFGVEKEIEITRLEGCNTCDGTGAKPGTKPTTCKTCGGQGQVVSSTRTPLGIFQQVSTCNTCGGTGEFSTPCNTCGGDGRVRKTKRISLKVPAGVDSGSRLRVRSEGNAGRRGGPPGDLYVFIDVLSDPVLKRDGTNILYTCKVSYIDAILGTTVKVPTVDGMVDLKIPSGTQPGTTLVMSKKGVPLLGKSNARGDQLVRVQVEIPKRLSSDERKLIEELANLNKAQTANSRR</aaseq>

Gene Sequence

<dnaseqindica>1..128#250..388#475..532#2503..2572#2800..2938#3025..3082#3830..3872#4038..4086#4184..4264#4355..5200#ATGGCGCTGCTACAGTTTGGAGGTACCTTGGCTCCCAAACTTGGGGAAAAACCTCAGCTGTTGCCCAGGTCACCTGCACTTACAAGAGTTATTTATGCTGATCCAAGATTTCTGGTGTCAAAAAGTGGGTATGTGAATGTGTTCTGATCAGTGAGATGTACTAGGAATACTAAAATAAAGGACACATTGATATTATAAAAAGGCAAGATTTCTGAGTAAACTGAAGATGATATATCTCTTTTTGTGCAGTAGTGGAGGCAGGCTTAAACACCTTGTATCACCTACTGCTAGTTTACAATCATGGACATCTTCTCGACTATTTAACCATGCACCATCACCGAGATTTCGCCATCGAAGGAGTTCAAGGTTCATTGTCAGAGCTGATGCTGTGAGTTACTTCATTTGCTTTTCTTCTTTGCTGGTATTATTAGAAAATCCAGTTTCCTGACATGGATTTGATATTTTAATTTACAGGATTTCTATTCCACACTTGGTGTTTCAAGAAATGCTAGTAAATCTGAAATCAAGAGTGGTAGGTGTGGTTTTATTTGTCAGTTTAGGGCATGCAGTGATTGGTGCTCCGTACAATCGTTGGAGTATTACCCAGCTTTGCTTCTTCTCTAGTTTGAGCCTGGTTGTAGGTTTGTAGGTACCCTATAATTTACCAAACAAACCAGACTACTTTCATGTGGCTATTAGTCGTAGATTACTAGTTTTAAATCATACTGTTCACGTGTGAAACAAAATATATGTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCAGCCCAGTAGGTATGTATATTTTTCTCGTTGGTAAATTTGGCAGCAAAAAAAAAAGTGTTTAATAGCGGATGTTATAAACCCGAGCATCTCATGGTGTCTATATATCAGCATATATGATATGTTAGGATTGGTAAGGATGCATATCACACGATTACAATTACCAACTCCACCTCGAAGATAATAAGCCCAATAGTCTAACCCTAAAATCCCTCCCGGGCTGTCCGTTCCTTTTCTCAACGATTCCCAGAAGCGCCGCTTATCCTCGAGCCGAGTGGCCGACAGCGCCGCCCAGGAGTCGAGGAGTCGTAGCTCGTAGCGCCACCCTTCCTTGTGCGCGCGGTTGTGCCCTTTCTCGCCGCCGGTCTCCCCGCTTCACCTCGCATCCTCAACGTCAACAGCTGCCATCCGCTCCTCACGCTGGCTATCGGGAAGGTCAGTAGGTCACGCCGTCTCCTTCCCTACTTGCCTCCGGCCACCCTAAGACCCCAACTCGCCTCTTCCTCGCGCGAATCGCCTAGTTACCCGGCGGGCGACACCCCTACTCCCGTGTGGCCGCGCGTCCTCGTCGTCTTGCTTGCCCTGCTTTCTTTGGCTCACGAGCCAAACGAGCCCGCTCGAGCTAGACAACTAGCCGAGCCTAGCTTGGTTTTCTAGCTCGTTAGGATAATAAGCCGAGCCTAGCTAGACCGAGCCGAGCTGGCTCGACATCCACCCCCTACACGCGTGCCTTTGCCCAAATCTTATCTCCCGGGAGGCTCACTTCCCTCCCCGAGTGGCTGCGACGACCTCCGCAGCTCGAGACGAGGTGCCACTTCTTCTTCTCTCTCTCCATCCCCCATTCCTCCCCTCTCTTCCCGTGTCCCGTCGTCCACAGCTCCCCGACCAAATCCCTAGCCCTACTATTCCCGCGCCCGCCCCTCCCTCGCGTGGTCACGCCCGACAGCGCCGTGCCGCCACCGCTTCTTGCCCTATTGCCGCAGTTCTTCAAGAGGCTTTTGTCCTAATTTGCTGCAGCCCGGTAGGTATTATATATTTTTGTGGTTGGTAAATTCGGCAGCAAAAAAGAAAAAAAAAATAATACCGAATGTTATAAACCCGAGCATCTCATGGTGTCCATGTATCAGCATATATGATATGTTAGGATCGGTAAGGATGCATAGCACACGATTACAACCACCAACTCCACCTCGAAGATAATATAGCGTAGTGTTTGCCAGCTTCGCACGTTATGGCCGAATTCTTATGTATAACAAATTTACCATGGTATGTAAGCTCAAAAATGCAAAACTAATTATCCTCGAACCTAAAAAAGTGTATACATGCAAGAGATGATCAATCCCACATATAAATACATGCAAATAATACACGCCCTGCTCGACAGCCACTGCTGCAGCTGTACCTAAGCTACTAGCTGTGGCCGCGGTGTGCATCCACAACCGTAGCAATGGCTGCTCAGCAGGCCCATGATCTCTGAAAAAGTTCCTGCAAGCAGTACATATGTATGTACAGTTGTACACACCCTCGCCCCTATTCATCCTCTTAAAGGAGTAAGGAGTAATGACAGTCGATATGTGTTGGTTGATTAAAATTTAGAAGAGAACGTTTTTGAATAGAATTGTGAACTTACTCGAATATCGTTCTTTTGTGTATTGCTTTTGTTATGCTTCACCTGACTCTATCTCTGTGAAATGGCAGCTAGTATATTGAAGGTTGAAGCTTTGTGGGTATCCAGCAAGTATTTCAATGGCGTTGCTACAGTTTGGAGGTACCTTGGCCCCCAAACTTGGGGAAAAACCTCAGCTGTTGCCCAGGTCACCTGCACTTACAAGAGTTATTTATGCTGATCCAAGATTTCTGGTGTCGAAAAGTGGGTATGTGAATGTGTTCTGATCAGTGAGATGTACTAGGAATACTAAAATAAAGGACACATTGATATTATAAAAAGGCAAGATTTCTGAGTAAACTGAAGATGATATATCTCTTTTTGTGCAGTAGTGGAGGCAGGCTTAAACACCTTGTATCACCTACTGCTAGTTTACAATCACGGACATCTTCTCGACTATTTAACCATGCACCATCACCGAGATTTCGCCATCGAAGGAGTTCAAGGTTCATTGTCAGAGCTGATGCTGTGAGTTACTTCATTTGCTTTTCTTCTTTGCTGGTATTATTAGAAAATCCAGTTTCCTGACATGGATTTGATATTTTAATTTACAGGATTTCTATTCCACACTTGGTGTTTCAAGAAATGCTAGTAAATCTGAAATCAAGAGTGGTAGGTGTGGTTTTATTTGTCAGTTTAGGGCATGCAGTGATTGGTGCTCCGTACAATCGTAGGAGTATTACCCAGCTTTGCTTCTTCTCTAGTTTGAGCCTGGTTGTAGGTTTGTAGGTACCCTATAATTTACCAAACAAACCAGACTGCTTTCATGTGGCTATTAGTCGTAGATTACTAGTTTTAAATCATACTGTTCACGTGTGAAACAAAATATATGTACAACAGAAACTGTTAAGCTTCCCAGGGAAGATATGAAATATATAACTAGTCTTTTTCAAACTTGGCCATAGTGAGCTTTATGGCCCACTTGTTTGTTCTCGAAAGCTTTACTATTCCTACTAGTAACTCAAATATTTGCTATTTCATCTAATTTGAAGGCTATCTCAGCAAAACCCCTTGAACTATTCTAAGACAAGCCTATGCTGTCTTCAGTATCATTTTCTGCAACTGATCATCTTGCGTTCTAGACTCGATACTGTTTATATTTCTGAAAATCTATTGTTGGCAACTTCTCATTGATGCATTGTTTGTATGGCCCTCAATCCCTGCCCTCCACGTGTGTGGGCAGAAATTTTGAACAAAAATCCCAACCCACACCCGTAGATAATCTAGGATTTGTCCTATCCAAATAATGCCTAAGGGGATATTATGTTAGAAATCCTTCAGAGTCAATTTTGATCAAAATATGTGTAGTAGTTTAATGTTGCTTTCTATTGTAGTTCTAAAATGGTCCTTCTTTTCCAGCCTATAGGAAGCTTGCTAGGAGCTACCATCCTGATGTGAACAAGTAAGTACTAACCATTATATGGGAATTGTGTTTCAGCTACACTCGATATATTGCTTCTTTTTCTCCTTTCGATCCATTATAAACCTGAGTACTAGTTGTTGCATTACCTTTTTCATAACTACATAATCAAATAAGCAATTGTTATGCTTGTGTATTTTTCTTTAGAGATCCTGGTGCTGAACAAAAGTTCAAGGATATTAGCAATGCTTATGAGGTTAGTCCAGCTAACCATAACCAAATCCCATTGTTTCTTATGACTATGTTGTTGTAGGGTTACAGGTGCTTGCCAGCTAACATAAATAGGATTGCAGGTTTTGTCTGATGATGAGAAGCGATCAATCTATGATAAATATGGAGAAGCTGGTTTGAAGGGTGCTGGAATGGGAACAGGAGTGAGTGTTCCTAGAATGTTGTCCAATTCTGAAGTATGATCAGCATGACCTTTATATGATATTGATTGTATGAAATTTGTGAATCTGCAGGATTACTCAAACCCATTCGATCTCTTTGAATCATTATTCGAAGGCTTTGGTGGAATGGGGGGAATGGGAGGCCGTGCTGCTCGGAACAGACCAATGCAGGGTGATGATGAGGCCTACAATCTGGTACTCAATTTCAAGGAAGCGGTGTTTGGTGTAGAGAAAGAAATTGAGATCACCAGACTGGAAGGCTGTAATACATGTGATGGAACTGGTGCCAAGCCTGGAACGAAACCAACCACATGCAAAACATGTGGAGGACAGGGACAAGTGGTCTCCTCAACAAGAACGCCACTTGGAATATTCCAGCAGGTCTCCACCTGCAATACTTGCGGAGGCACTGGTGAATTCTCTACCCCGTGCAACACTTGTGGGGGTGATGGCCGAGTGCGGAAGACAAAAAGGATCAGTCTAAAGGTTCCTGCTGGTGTTGATTCTGGAAGCAGATTGAGGGTCCGGTCTGAGGGGAATGCTGGGCGGAGAGGAGGCCCTCCTGGAGATCTTTATGTGTTTATTGATGTTCTCTCTGATCCTGTTCTTAAGCGAGATGGGACAAACATTCTATACACATGCAAAGTTTCATATATTGACGCAATTCTTGGGACAACCGTCAAGGTTCCCACTGTTGATGGGATGGTTGACCTGAAGATCCCCTCCGGTACCCAGCCAGGCACAACGTTAGTGATGTCCAAGAAAGGTGTCCCACTCCTCGGGAAGTCAAATGCTCGTGGAGACCAGCTAGTGCGTGTGCAGGTCGAGATTCCAAAGCGTCTGAGCAGCGACGAGAGGAAGCTGATTGAAGAACTTGCAAACCTAAACAAGGCTCAAACAGCAAACAGCAGGAGATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018283

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA018283&oldid=47039"