BGIOSGA018311

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Revision as of 02:33, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018311| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018311, complete gene.| tag = OS05G03...")
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Gene Name

BGIOSGA018311

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018311, complete gene.

LocusTag

OS05G0317300

Ensembl Transcript ID

BGIOSGA018311-TA

Ensembl Protein ID

BGIOSGA018311-PA

Length

4187

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:15646771..15650957

Sequence Coding Region

15650667..15650957,15648203..15650527,15646771..15646986

Genome Context

<gbrowseImage1> name=IndicaChromosome05:15646771..15650957 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:15646771..15650957 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCCAGATCCTGCTGACGTCATCCTCCATCAACCCCGCAAATTCCCCCACCAACGGAACACTAAGGGGCTCGTCCTCCGCCTCCGCCGCCGCGGCTGCCTCGGCGTCGGTGGCAGGCGCCGCCGTACGCCACCGCGCTCCTTTCCTCGCCGCCGCCATCAAGCGCTCTCCGCGGGACATCTACAGGACGGCTACGCGCCCGCCGGAGCCCTTGACCTCCTCGCCTCCGGGCGACCCAGACCTGGCGCGGCTCTTCGTCGGGCTCGCACGCTCTATTCGATCCGTGCGGGCCTTTTTCGGTCACATGGAAGACAATGATGACAGGGCGTCAGCTGAGATTACCACTGACCAAGAGAATCATCTCAAGGACGCCTTAATCCAGGTGTTTGCTGCTACTTCTGAACACCAAGAAGGTGAAGGTGAAGGTGCAGAGGTTGTGCAGGATGAAGAGATTGGTGAAGGTGTGGAGGGTGTGCGGGATGAGGAGATTGGAGATATCAATTCGAAGCCCGACAAACCATATGTTGGCATGGAGTTTCGTGACAAGGACGAGGCAAAGAACTATTATGATGACTACGCGAGGAAATGGGGTTTCATAACAAAGATTTCAAGCTGTAGAAGAAGCCAGATCACAAAGCAATACAATCGGTATGAGTTCGCTTGCCACTCCGAGCGGAGCTCGAGGGAATCTGGTGCTAGTGCTGGCAGCAGGTCAAGGAGGTCCAGTAGAGTTCTGAAGACAGGTTGTAAGGCAAGAATGGTGGTTGTGAAGAGGGATGAGAAGTGGGTGGTCACCATAGTAGATCTGGATCACAACCATCCACCTTTGAACCCTTCTGCACTTATGTCCTTAAAGCCTCATCGCCTCATAAAAGATGAAGATCATGATCTCTTAGAGTTTCTGCGCACAAACAAGATACCCACGCAGAGGATCATGTCTGTTCTCTGTGATTTGTATGGAAGCATGCAAAACATCCCTCTTGCAAGGAAAGATGTGAGCAACCTGAGGGCGACCATGAGGCCAGAGGCTGAGGGCACCTGCACTGATATGGCAGCTACAATCAAATACTTCCAAGAATCGCAAGCAGATGACCCATCATTCTTTTACAGTATGGAATTGGACAGCGAAAGCAAAATTACCAGCGTCTTTTGGGTGGATGGAGTATCAAGGGAAGCATATAGAGAATTTGGTGATTGCGTGTTTTTTAACACAAAATACATCACAACAAAGTACTGTCTTCCATTTGCGCCCATTATTGGTATGAACAATCATGGGCAGACTGTGCTTTTCGGGTGTGTGTTGCTGAAGGCTGAAATTGAGGAGACATTTGAATGGGTGTTTCAGACTTTTCTTAAGGCCATGGATGGGAAAGTGCCAAAGAGTATCATGACCGATCAAGATGAAGCAATGGAGAACGCAATCGCAAATGTTTTGCCAAACACATCTCATAGGCGTTGCTCATGGTACATATGGAGAAATGCTAAGTTCAAGCTTGGTGTGCTGCCGTCTCGGTTGGAAGGGTTTGAAGATGACCTAAGACATTGCATTGACGAGTCGTTTAATGTTGAAGAGTTTGAAAGAAGATGGGCTGCTGTGCTTGACCGATACAATTTGGCAAGCAACAAGTATATGCAGGACCTCTACGAAATCAGAGAAAAATGGGTTCCATGCTATTTCATGGACTGCTTCTTCCCATTTATGAGCATTACCCAACAGAGTGAGGTGATGGAAGCATTGTTCAAGGATTTTGTCCACCCTGGGGACATCATCCAGAACTTCATCGTGCAATATGAGAAGCTCGTTCAATCTTGTCTGGACAGGGATGATAAACAGCTCTTTCTTACTGTCAAAACAGATGCAAATTTGTGGTCCAAATTTCCAATGGAGGAGCAGGCATCAAAATTCTACACTCGTGCAATATTTGAGAGGTTTCAGGAGCACCTCAAGAACACTACTATGTATAATGTAGTATGCGAGGCAACCCCTTATTCCTATTTGGTCCAAAATGTGTTTGGTGACCAAAGCCAGAACAGAAGATATGTTGTTCATTGCAAATTGGAGGATGAGACCTTCACATGTGTTTGCAAGCAGTATGAGAGGGAAGGATTACTCTGTGAGCATATCCTAAAGGTGATGACACATAGGAATGTCAATCTGATACCAGATAAATACTTGTTCCGTAGGTGGACTCTGAAGGGATCAGACAGTGCTGCTACACGAAGTCATGTACCTTTGAACATGGCTGAAGCGTCCACTAGGAAAATGAGGTATTCAACAATTTGCAAGAAATCAGTGTGCATGGCAAGTGAGGCATGTAGAACACAGGAAGGATACAATCTAGCCCTCCGTTCAATTGAAGAACTGACTGACAAGCTTGCCGCTATTAACTTGACCCGACAAGATCAACACCTTCCTCGGCCCAACATTTGTGATAAGAATGGGAAAGGGATCACCATGGGTGAGAGTAATACGATAGCTGAGAAGGTGCTTTCAGAAAGCTGTCTAAAAGATCCAACAAAAATCAGGCCTGCTGCGTTTGACAATAATAGTGAGTCAGCAAGAAAGAGAAACAAAGTGATGAAAGCGGTGCAAGATCTCAGGAGTCCATTTCAGGGAAGAAACATCAAGATTCAATGGATCCCCAGAGAAATGAACAAGATGGCAGACAATTTGGCAAAATCTGCTAGGGAGCTTTCTAGTCAATCTCAGATGGCTTTTGATTGTTCAAACATTTCTCATATATGTCACAATTCTGGTTGTCCTACCAGGAGAGGACTTCTTCTTACTCCCAACGAGGATGTAACTATAGCTCATGCTCTATGCTTCTAA</cdnaseq>

Protein Sequence

<aaseq>MAQILLTSSSINPANSPTNGTLRGSSSASAAAAASASVAGAAVRHRAPFLAAAIKRSPRDIYRTATRPPEPLTSSPPGDPDLARLFVGLARSIRSVRAFFGHMEDNDDRASAEITTDQENHLKDALIQVFAATSEHQEGEGEGAEVVQDEEIGEGVEGVRDEEIGDINSKPDKPYVGMEFRDKDEAKNYYDDYARKWGFITKISSCRRSQITKQYNRYEFACHSERSSRESGASAGSRSRRSSRVLKTGCKARMVVVKRDEKWVVTIVDLDHNHPPLNPSALMSLKPHRLIKDEDHDLLEFLRTNKIPTQRIMSVLCDLYGSMQNIPLARKDVSNLRATMRPEAEGTCTDMAATIKYFQESQADDPSFFYSMELDSESKITSVFWVDGVSREAYREFGDCVFFNTKYITTKYCLPFAPIIGMNNHGQTVLFGCVLLKAEIEETFEWVFQTFLKAMDGKVPKSIMTDQDEAMENAIANVLPNTSHRRCSWYIWRNAKFKLGVLPSRLEGFEDDLRHCIDESFNVEEFERRWAAVLDRYNLASNKYMQDLYEIREKWVPCYFMDCFFPFMSITQQSEVMEALFKDFVHPGDIIQNFIVQYEKLVQSCLDRDDKQLFLTVKTDANLWSKFPMEEQASKFYTRAIFERFQEHLKNTTMYNVVCEATPYSYLVQNVFGDQSQNRRYVVHCKLEDETFTCVCKQYEREGLLCEHILKVMTHRNVNLIPDKYLFRRWTLKGSDSAATRSHVPLNMAEASTRKMRYSTICKKSVCMASEACRTQEGYNLALRSIEELTDKLAAINLTRQDQHLPRPNICDKNGKGITMGESNTIAEKVLSESCLKDPTKIRPAAFDNNSESARKRNKVMKAVQDLRSPFQGRNIKIQWIPREMNKMADNLAKSARELSSQSQMAFDCSNISHICHNSGCPTRRGLLLTPNEDVTIAHALCF</aaseq>

Gene Sequence

<dnaseqindica>1..291#431..2755#3972..4187#ATGGCCCAGATCCTGCTGACGTCATCCTCCATCAACCCCGCAAATTCCCCCACCAACGGAACACTAAGGGGCTCGTCCTCCGCCTCCGCCGCCGCGGCTGCCTCGGCGTCGGTGGCAGGCGCCGCCGTACGCCACCGCGCTCCTTTCCTCGCCGCCGCCATCAAGCGCTCTCCGCGGGACATCTACAGGACGGCTACGCGCCCGCCGGAGCCCTTGACCTCCTCGCCTCCGGGCGACCCAGACCTGGCGCGGCTCTTCGTCGGGCTCGCACGCTCTATTCGATCCGTGCGGGTGCGACCGGGCGATCTGAAGTCTCGCTGAGCATCAGGTAAGTTTCCCTTGGCTTGATTGGTGGCGTCCACGGTGGGTGTATGCTACGTGTTCGATCAAATGCCTGACAGGGCCTGGTCCGGTTGCTGCTGTGGTGCAGGCCTTTTTCGGTCACATGGAAGACAATGATGACAGGGCGTCAGCTGAGATTACCACTGACCAAGAGAATCATCTCAAGGACGCCTTAATCCAGGTGTTTGCTGCTACTTCTGAACACCAAGAAGGTGAAGGTGAAGGTGCAGAGGTTGTGCAGGATGAAGAGATTGGTGAAGGTGTGGAGGGTGTGCGGGATGAGGAGATTGGAGATATCAATTCGAAGCCCGACAAACCATATGTTGGCATGGAGTTTCGTGACAAGGACGAGGCAAAGAACTATTATGATGACTACGCGAGGAAATGGGGTTTCATAACAAAGATTTCAAGCTGTAGAAGAAGCCAGATCACAAAGCAATACAATCGGTATGAGTTCGCTTGCCACTCCGAGCGGAGCTCGAGGGAATCTGGTGCTAGTGCTGGCAGCAGGTCAAGGAGGTCCAGTAGAGTTCTGAAGACAGGTTGTAAGGCAAGAATGGTGGTTGTGAAGAGGGATGAGAAGTGGGTGGTCACCATAGTAGATCTGGATCACAACCATCCACCTTTGAACCCTTCTGCACTTATGTCCTTAAAGCCTCATCGCCTCATAAAAGATGAAGATCATGATCTCTTAGAGTTTCTGCGCACAAACAAGATACCCACGCAGAGGATCATGTCTGTTCTCTGTGATTTGTATGGAAGCATGCAAAACATCCCTCTTGCAAGGAAAGATGTGAGCAACCTGAGGGCGACCATGAGGCCAGAGGCTGAGGGCACCTGCACTGATATGGCAGCTACAATCAAATACTTCCAAGAATCGCAAGCAGATGACCCATCATTCTTTTACAGTATGGAATTGGACAGCGAAAGCAAAATTACCAGCGTCTTTTGGGTGGATGGAGTATCAAGGGAAGCATATAGAGAATTTGGTGATTGCGTGTTTTTTAACACAAAATACATCACAACAAAGTACTGTCTTCCATTTGCGCCCATTATTGGTATGAACAATCATGGGCAGACTGTGCTTTTCGGGTGTGTGTTGCTGAAGGCTGAAATTGAGGAGACATTTGAATGGGTGTTTCAGACTTTTCTTAAGGCCATGGATGGGAAAGTGCCAAAGAGTATCATGACCGATCAAGATGAAGCAATGGAGAACGCAATCGCAAATGTTTTGCCAAACACATCTCATAGGCGTTGCTCATGGTACATATGGAGAAATGCTAAGTTCAAGCTTGGTGTGCTGCCGTCTCGGTTGGAAGGGTTTGAAGATGACCTAAGACATTGCATTGACGAGTCGTTTAATGTTGAAGAGTTTGAAAGAAGATGGGCTGCTGTGCTTGACCGATACAATTTGGCAAGCAACAAGTATATGCAGGACCTCTACGAAATCAGAGAAAAATGGGTTCCATGCTATTTCATGGACTGCTTCTTCCCATTTATGAGCATTACCCAACAGAGTGAGGTGATGGAAGCATTGTTCAAGGATTTTGTCCACCCTGGGGACATCATCCAGAACTTCATCGTGCAATATGAGAAGCTCGTTCAATCTTGTCTGGACAGGGATGATAAACAGCTCTTTCTTACTGTCAAAACAGATGCAAATTTGTGGTCCAAATTTCCAATGGAGGAGCAGGCATCAAAATTCTACACTCGTGCAATATTTGAGAGGTTTCAGGAGCACCTCAAGAACACTACTATGTATAATGTAGTATGCGAGGCAACCCCTTATTCCTATTTGGTCCAAAATGTGTTTGGTGACCAAAGCCAGAACAGAAGATATGTTGTTCATTGCAAATTGGAGGATGAGACCTTCACATGTGTTTGCAAGCAGTATGAGAGGGAAGGATTACTCTGTGAGCATATCCTAAAGGTGATGACACATAGGAATGTCAATCTGATACCAGATAAATACTTGTTCCGTAGGTGGACTCTGAAGGGATCAGACAGTGCTGCTACACGAAGTCATGTACCTTTGAACATGGCTGAAGCGTCCACTAGGAAAATGAGGTATTCAACAATTTGCAAGAAATCAGTGTGCATGGCAAGTGAGGCATGTAGAACACAGGAAGGATACAATCTAGCCCTCCGTTCAATTGAAGAACTGACTGACAAGCTTGCCGCTATTAACTTGACCCGACAAGATCAACACCTTCCTCGGCCCAACATTTGTGATAAGAATGGGAAAGGGATCACCATGGGTGAGAGTAATACGATAGCTGAGAAGGTGCTTTCAGAAAGCTGTCTAAAAGATCCAACAAAAATCAGGCCTGCTGCGTTTGACAATAATAGTGAGTCAGCAAGAAAGAGAAACAAAGTGATGAAAGCGGTGCAAGATCTCAGGAGTCCATTTCAGGTAACAAAACTGACGGATTGAAGTACAGGGTATCAGTCCATCCTTGATGTCTGATTATGTAAATGCAATAGTGTCCTTGTGCCCCCTTCTCTTAACTCGCTGACCTGTAAGGAAAGAAGGATTTGCTGCACATGGGAGAACGGTGCTAGCCTTGTTGACTTCTTTTTTTCTTTTTTTTTTTTAGCAAATGCCCTGCTGGAGTTAATGTGCTATAACGTCATTTTGGCACTTTGGTAGTGATTGCGCTCTTCCGTATCTGAAATTCTTTTCTTCCAGTAGCATAGCATGTCTGCAATGCAATGTTGAGGTCTAGGAACTGGTAGACTATGGTTAAAGTTTAACTGAAACATTTGGAGACTCTAAAGTACCCTTACGAAATCTGAATTTGCTGATGTAGATATTGCTAATTTTTTTTATAAAATTGGTCAAACTTCAATGGAACTCTCACTCAGCAGCTCATATGTACTTGTGTGTAACTCTGTGCTACAACTGTTATATATAACTTGGATGAAAAATTGTTACAACTTGAATGCAAGTATCTCGACGAATATGGTTCTTTTTTTCAAAAAAAACGTGAAATTGAAATTTCCTATACATCCGTTTGGATATTGCTTGAATTTTAGAGGCTTGCCTGCTATCCTTTGGATGTTGGAACACTACAGTACGGTATCCCGTTTAGAGTCAATTATATGTGTTTATGGAATACGGGTCTTGTACCTGTATTAGGGGACTCTGGTGGTTCTGCAAGCATGTCGAGCAGAACTGGAGATCTATTCAGGACAATAGTAGGTTCAAGTTAGAAGATTGCATATCACCAATAGAATTCCAGTCAGCAGATTTGGAAAGCAGAAACGAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGAGATGCTATGTGGATGCGTCGTGGAAAGAGGGCAAGACAGGGATTGGAATTTTTATACATAACCCTGAAAACCATAATACCATTGTTATAAAGGCAACAAGCTCGATGTCAGGATCTCCTCTGTTAGCTGAAATGAACGCCTTCATGTTAGCAATTCAGATTTGTCACCAATTGCAGATTCAAAGTCCAGTCTTTCTTTCTGATAACATCATGGTGGTGGATGCAATCCAAAAAGAAGACTACATGACAGATCCAGGACATTGGTCTTTAAGACCTGCTTTGTCAAGAATTCATAATATTTTGCAGGGAAGAAACATCAAGATTCAATGGATCCCCAGAGAAATGAACAAGATGGCAGACAATTTGGCAAAATCTGCTAGGGAGCTTTCTAGTCAATCTCAGATGGCTTTTGATTGTTCAAACATTTCTCATATATGTCACAATTCTGGTTGTCCTACCAGGAGAGGACTTCTTCTTACTCCCAACGAGGATGTAACTATAGCTCATGCTCTATGCTTCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018311