BGIOSGA018368

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Revision as of 02:34, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018368| Description = BGIOSGA018368| Definition = Oryza sativa Indica Group BGIOSGA018368, complete gene.| tag = | tid = BGIOSGA018368-TA|...")
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Gene Name

BGIOSGA018368

Description

BGIOSGA018368

Definition

Oryza sativa Indica Group BGIOSGA018368, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA018368-TA

Ensembl Protein ID

BGIOSGA018368-PA

Length

2585

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:14010860..14013444

Sequence Coding Region

14012742..14013444,14011867..14012510,14011313..14011606,14010860..14011141

Genome Context

<gbrowseImage1> name=IndicaChromosome05:14010860..14013444 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:14010860..14013444 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGTCGGAGGCTAACGCTTGTCCCTGGAGCAAAGACTTGGCTGTCCGTTGGAGTTTCTGACGTGCTGGAGGTCTCCGATGAGGAGGGGGACCAGGAAGGACGGCGACAGTCCTCATCACCAGGACCAATCCATGTAGGTATGAAAGGTAAGGTCGCTCGCTTTTCAGCTCATTCGAAAGGTTTTAGGGAGGAGTTTAGCGGTGCTGCCAAGCCAAAAACCTTTGGTTCGAGATTTTGGGCCTTGGGAGATGTTTCTGATGCGACTGACAGTGAGTTGGAGGGAGAGAAGGATGCAGCAACTTCCGTGNAAGAGGCGTTTCCTGAGGCGCGCTTTGTACGAAGAGCGCTGGCGGAAGGTTTCACGGTAGATGAGGTGCTTAAAGCCAGCGAACACCTGCTGCTCAATCCTGCAGCCACTTCAGGTTCATGCACTAAGAGCACGAATTTGAAAGGAAATGGTCTGCTAGCAAGGAGGATTGTAGATTCAGTTGCAAAACGAAAGGAAAGCTCTATTAAACCAAGGAAGGGGCCATTGCCGAGAGCTAGGATCTCGCAGCCGCTAACCATTGGAGACAAACTCGATGAAGCTTTCACTGCTAAGCTCAGTAATTCAGTCAAGTTTAGAAAAGCTTGGGTTCCTATTGCAACTAGACAAGAAAACGAGGCAACTCTTTCAAGGGAAAGAGATGAAAGTTGTGCAGGCCAACTGCTGTCATGGGCCGGGCAGCATGAACGAGTGAAGAATCGCTTGGGTCAGCCACCAACGCTTGGTATCCTGAGCAATACAGCTGGCCACTCGTCTCCCGTGAGAACGTATACCCATATCCTTCAAAGAAGCAGTTCAGAAACAGAGCAGGCAACGGAGAGCGAGCAACAGATTCGGGAGGTTTCCACCATGGCGCATAGAGAAGATTGGGACCGACAGGGCAATCGAGGCTGGGGAAGAAGAGATGATTCGCATTGGGAGGATGAAGGCAATTTTTTCCAGGAGAGAGGTGGAGGAGAAGACTTCCATTTTCGCTTTCATCCTGGTTTAGGGTTTAACCGGGAGGGAGGAGGGAGAGGTTGGATGAGTCAGGGCTTCAGGCCAAGAGGGGCTAGAAGTTTTGGGACCAGAAGAGGAGGCTTTGCTGGAAGGCCAGGTCGCAGCGGAGCACATCATGCCGGGCGGTCGAATCTGCCCAGTTATGGCCAAAGGGTGATGGACAGCGGTACTGGCAGGGCTGAGAAAACAACAATGGGATCAGGGAGCAACAAGGGAGGCACACTTGTGAGCCGATGGGATAAATCAGCTGAAGGTTCAAGGAAGGTTTTGGGAGGAAAGAAGGAAGCATGGCAAAACAAGTGCCCAGTTTTGAAGCTTCCAAAACCGGTGGTTCAGGCTGTTGGTATGGTGGAAGGGTTAGGGTTCTGTCATATACCACATCAACCGTTACAGAGAAGTAAGAAAGCGACAAAGTTGGCCCTTGTGCATGTGGTGGGCGGATCCCTGTCCAAGGAGAGATTGGTTGCACAATTGCAAAGGTTGTGCGTTGCTAAATGGAAATGGGAACCCGTGGAGCAGGGAAAGGACTCTTTTGTGGTGCTTTTCCCATCTAAAGGGGAGTTGCAGCGGGCAATTAACTTCGGAGGCGCTGAGATGGTTGACATGAAAACCACAAGGAAAAATGACTTTGGTAGAATTTTTATTGCTATTCTTGATCCAAAGATTATTCCTCGGAATATTGATGTTGTGATTGGTGATCATTATTTTGAGCTAAGATTTGAGGTGGAAAAGAAAGGGTTTGATGATAATGGAGATGAAGTGGAATTCCATTTCGAAAAGGAGGATGGGGATGGGGATGACGGTGGTTTGGACGACATGGAAGATGGGAAGGAAAATGGGAATGAAAAAGAGGGAGACCATAAGAGATATGAATAG</cdnaseq>

Protein Sequence

<aaseq>MGRRLTLVPGAKTWLSVGVSDVLEVSDEEGDQEGRRQSSSPGPIHVGMKGKVARFSAHSKGFREEFSGAAKPKTFGSRFWALGDVSDATDSELEGEKDAATSVXEAFPEARFVRRALAEGFTVDEVLKASEHLLLNPAATSGSCTKSTNLKGNGLLARRIVDSVAKRKESSIKPRKGPLPRARISQPLTIGDKLDEAFTAKLSNSVKFRKAWVPIATRQENEATLSRERDESCAGQLLSWAGQHERVKNRLGQPPTLGILSNTAGHSSPVRTYTHILQRSSSETEQATESEQQIREVSTMAHREDWDRQGNRGWGRRDDSHWEDEGNFFQERGGGEDFHFRFHPGLGFNREGGGRGWMSQGFRPRGARSFGTRRGGFAGRPGRSGAHHAGRSNLPSYGQRVMDSGTGRAEKTTMGSGSNKGGTLVSRWDKSAEGSRKVLGGKKEAWQNKCPVLKLPKPVVQAVGMVEGLGFCHIPHQPLQRSKKATKLALVHVVGGSLSKERLVAQLQRLCVAKWKWEPVEQGKDSFVVLFPSKGELQRAINFGGAEMVDMKTTRKNDFGRIFIAILDPKIIPRNIDVVIGDHYFELRFEVEKKGFDDNGDEVEFHFEKEDGDGDDGGLDDMEDGKENGNEKEGDHKRYE</aaseq>

Gene Sequence

<dnaseqindica>1..703#935..1578#1839..2132#2304..2585#ATGGGTCGGAGGCTAACGCTTGTCCCTGGAGCAAAGACTTGGCTGTCCGTTGGAGTTTCTGACGTGCTGGAGGTCTCCGATGAGGAGGGGGACCAGGAAGGACGGCGACAGTCCTCATCACCAGGACCAATCCATGTAGGTATGAAAGGTAAGGTCGCTCGCTTTTCAGCTCATTCGAAAGGTTTTAGGGAGGAGTTTAGCGGTGCTGCCAAGCCAAAAACCTTTGGTTCGAGATTTTGGGCCTTGGGAGATGTTTCTGATGCGACTGACAGTGAGTTGGAGGGAGAGAAGGATGCAGCAACTTCCGTGNAAGAGGCGTTTCCTGAGGCGCGCTTTGTACGAAGAGCGCTGGCGGAAGGTTTCACGGTAGATGAGGTGCTTAAAGCCAGCGAACACCTGCTGCTCAATCCTGCAGCCACTTCAGGTTCATGCACTAAGAGCACGAATTTGAAAGGAAATGGTCTGCTAGCAAGGAGGATTGTAGATTCAGTTGCAAAACGAAAGGAAAGCTCTATTAAACCAAGGAAGGGGCCATTGCCGAGAGCTAGGATCTCGCAGCCGCTAACCATTGGAGACAAACTCGATGAAGCTTTCACTGCTAAGCTCAGTAATTCAGTCAAGTTTAGAAAAGCTTGGGTTCCTATTGCAACTAGACAAGAAAACGAGGCAACTCTTTCAAGGGAAAGAGATGAAAGTTGTGCAGGTTTGAGGGAGGAGGATGACAAGGAAGTTTTTTTGGCGACGGAGGAAGAAAGAAGAGAGTTGATCTTTGGGAGTACAACCGGCCGGCTGGAAACATGACAACCTAGGGGAGTCGAGGAGTTTGGTCGGTTTCCTGTCTCACGTTTCAAACTAAAGAAGGACAGTGGGCCGTCCAAACAATTTTATTTGGGGACTGGACATAAAGTCCAAATCAAGTTCCACTTTGGAGCAGGCCAACTGCTGTCATGGGCCGGGCAGCATGAACGAGTGAAGAATCGCTTGGGTCAGCCACCAACGCTTGGTATCCTGAGCAATACAGCTGGCCACTCGTCTCCCGTGAGAACGTATACCCATATCCTTCAAAGAAGCAGTTCAGAAACAGAGCAGGCAACGGAGAGCGAGCAACAGATTCGGGAGGTTTCCACCATGGCGCATAGAGAAGATTGGGACCGACAGGGCAATCGAGGCTGGGGAAGAAGAGATGATTCGCATTGGGAGGATGAAGGCAATTTTTTCCAGGAGAGAGGTGGAGGAGAAGACTTCCATTTTCGCTTTCATCCTGGTTTAGGGTTTAACCGGGAGGGAGGAGGGAGAGGTTGGATGAGTCAGGGCTTCAGGCCAAGAGGGGCTAGAAGTTTTGGGACCAGAAGAGGAGGCTTTGCTGGAAGGCCAGGTCGCAGCGGAGCACATCATGCCGGGCGGTCGAATCTGCCCAGTTATGGCCAAAGGGTGATGGACAGCGGTACTGGCAGGGCTGAGAAAACAACAATGGGATCAGGGAGCAACAAGGGAGGCACACTTGTGAGCCGATGGGATAAATCAGCTGAAGGTTCAAGGAAGGTTTTGGGAGGAAAGAAGGAAGCATGGCAAAACAAGGTTGGGGATTTAGGAGCATCGGTGGCTGGAAAGGAAGGAAGAGGGAAAATGTGGTAGGAGAAGTTGTCAGCGAGGGTGATGCAAAGGATCAGGAGTTCGATCGACCATTGTTCGAGGACAGAAATAACAAAGGTGAAGGCGTAAAAGGGGCAGCGAAGAAGGTATGTTCCAAGTGCTTTCAAAAAGGTCATGTGGCTGATGATTGCGTGGTAGAAGTCTATTGTGATATTTGTGACTCTTTTGATCATGTCAATCACAAGTGCCCAGTTTTGAAGCTTCCAAAACCGGTGGTTCAGGCTGTTGGTATGGTGGAAGGGTTAGGGTTCTGTCATATACCACATCAACCGTTACAGAGAAGTAAGAAAGCGACAAAGTTGGCCCTTGTGCATGTGGTGGGCGGATCCCTGTCCAAGGAGAGATTGGTTGCACAATTGCAAAGGTTGTGCGTTGCTAAATGGAAATGGGAACCCGTGGAGCAGGGAAAGGACTCTTTTGTGGTGCTTTTCCCATCTAAAGGGGAGTTGCAGCGGGCAATTAACTTCGGAGGCGCTGAGGTGAAAGAAGGAGGAGTGGCGACTGGGATAAGAATGGAATTCAGATAATGGTATGAAAAGGAGGAGGGATATCTGTTGCCCAAAGTGTGGGTGAAAGTGTTTGGTTTAAGGAAAAAGCTAAGGGAATACTTGACCTTGTGGGCGGTCGGCTCTCTTTTGGGGGCAACTCAGATGGTTGACATGAAAACCACAAGGAAAAATGACTTTGGTAGAATTTTTATTGCTATTCTTGATCCAAAGATTATTCCTCGGAATATTGATGTTGTGATTGGTGATCATTATTTTGAGCTAAGATTTGAGGTGGAAAAGAAAGGGTTTGATGATAATGGAGATGAAGTGGAATTCCATTTCGAAAAGGAGGATGGGGATGGGGATGACGGTGGTTTGGACGACATGGAAGATGGGAAGGAAAATGGGAATGAAAAAGAGGGAGACCATAAGAGATATGAATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018368

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA018368&oldid=47124"