BGIOSGA018452

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Revision as of 02:35, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018452| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018452, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA018452

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018452, complete gene.

LocusTag

OSJNBA0037H06.1

Ensembl Transcript ID

BGIOSGA018452-TA

Ensembl Protein ID

BGIOSGA018452-PA

Length

4559

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:10527834..10532392

Sequence Coding Region

10532171..10532392,10531918..10532046,10531602..10531796,10530545..10530709,10529411..10529580
,10529081..10529236,10528171..10528523,10527834..10528021

Genome Context

<gbrowseImage1> name=IndicaChromosome05:10527834..10532392 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:10527834..10532392 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGATGAGCAGTCGTCTTCTCAAACGCGCCTGCCTCCTCCTCCTCGTCTCGTCATGGCTATGCTCCCTCTCCGACGCCAAGAGGAAGACGCCACCCTCGCCGCCGCCGCCGCCCTCCTCCTTTGGCCTCCCCGTCCGGGCGGTGTGCCTCGGTGGCTGGCTCGTCACGGAGGGCTGGATCCTCCCCTCCCTCTTCGACGCCATCCCTAACAAGGACCTCCTGGACGGCGCGCAGCTGCAGCTCAAGGCCGTGGCGGCGGGCGCGTACCTCACCGCCGCCGACCAGGGCGGCGCCGCGGCGGTCGTCGCCAACCGGACGCAGGCGGCACCCTCCGCCTCGGAGACCTTCAAGCTGTGGCGGATCAACGAGACGACGTTCAACTTTCGGGCGTCGAGCGGCCGGTTCGTCGGCGCCGGGAGCGACGGCGGCGCGGCGGTGGTGGCGGTGGCCGCCGCGCCGGGGCCGTCGGAGACGTTCCAGGTGGTGCGCGACGACGGCGACAAGAGCCGGGTGCGGATTAGGGCGCCAAATGGGCACTTCTTGCAGATAGCATTGGGATCTAACTCAGTGACAGCAGATTACTACGGTGAAAGCACAAGTTGGGGAGACGATGACCCATCAGTATTTGTAGTAACAAAAGTTTTGGAGCTGCAGGGAGAGTACCAGATTTGCAATGGCTATGGTACAGCCAAGGCTACACCAATACTCAGGAATCATTGGAGCACATACATAGTCGAAGACGACTTCAAGTTCATCTCAGCAAGCGGGTTAACAGCAGTGCGAATTCCAGTTGGATGGTGGATTGCGAGTGATCCCAATCCTCCGGCTCCATATGTCGGAGGATCCCTGCAAACCTTGGACAATGCCTTCAAGTGGGCAGAGAAGTACAAGCTGGGCGTTATTATTGATCTCCATGCGGCTCCCGGGTCGCAGAACCCATGGGAGCATAGCTCATCCAGAGATGGCACGCAGGAGTGGGGAACATCTGATGCTAACATCGCAGAGACAGTGCAAGTGATCGACTTCCTCGCATCCAGGTACGCAAAGAGCCCAAGCCTCCTGGCAGTGGAGCTGATGAATGAACCGTTTGCACCCCGTGCCACCTTGGAGAGTCTGATGAAGTACTACCATGATGGATACAACGCCGTCAGGAAATACTCATCGACGGCTTACGTCATCATGTCGAACCGTCTGGGACCGCATGATCCAACTGAGTTTCTTCAATTTGCCAACGGCTTCCCCCGTGCCGTCATCGATGTGCACTACTACACGGTGTTCAATGACCTGTTCAATAACCTGACTGTGCAGCAGAACATTGATTTTATCAAATCAAACTTCTCAAGTGAGCTAAAAAATGTCACAACACAAAATGGCCCTCTCACCTTTGTGGGAGAATGGGTGGCTGAGTGGAGAGTACCCAATGCAACAAAGGAAGAGTACCAGAGATATGCAAAGGTGCAGATGGATGTTTATGGGCAGGCCACCTTTGGATGGTCCTATTGGACTCTCAAGAATGTTAACAACCACTGGAATCTAGAGTGGATGATCAACAATGGCTACATCTCCTTGAAAACCTAA</cdnaseq>

Protein Sequence

<aaseq>MMSSRLLKRACLLLLVSSWLCSLSDAKRKTPPSPPPPPSSFGLPVRAVCLGGWLVTEGWILPSLFDAIPNKDLLDGAQLQLKAVAAGAYLTAADQGGAAAVVANRTQAAPSASETFKLWRINETTFNFRASSGRFVGAGSDGGAAVVAVAAAPGPSETFQVVRDDGDKSRVRIRAPNGHFLQIALGSNSVTADYYGESTSWGDDDPSVFVVTKVLELQGEYQICNGYGTAKATPILRNHWSTYIVEDDFKFISASGLTAVRIPVGWWIASDPNPPAPYVGGSLQTLDNAFKWAEKYKLGVIIDLHAAPGSQNPWEHSSSRDGTQEWGTSDANIAETVQVIDFLASRYAKSPSLLAVELMNEPFAPRATLESLMKYYHDGYNAVRKYSSTAYVIMSNRLGPHDPTEFLQFANGFPRAVIDVHYYTVFNDLFNNLTVQQNIDFIKSNFSSELKNVTTQNGPLTFVGEWVAEWRVPNATKEEYQRYAKVQMDVYGQATFGWSYWTLKNVNNHWNLEWMINNGYISLKT</aaseq>

Gene Sequence

<dnaseqindica>1..222#347..475#597..791#1684..1848#2813..2982#3157..3312#3870..4222#4372..4559#ATGATGAGCAGTCGTCTTCTCAAACGCGCCTGCCTCCTCCTCCTCGTCTCGTCATGGCTATGCTCCCTCTCCGACGCCAAGAGGAAGACGCCACCCTCGCCGCCGCCGCCGCCCTCCTCCTTTGGCCTCCCCGTCCGGGCGGTGTGCCTCGGTGGCTGGCTCGTCACGGAGGGCTGGATCCTCCCCTCCCTCTTCGACGCCATCCCTAACAAGGACCTCCTGGTATGGCCGTCTCGCCGCCGCCGCCGCCGCCATGTCCACGAATGAGTCCGACCATGACCTCTGTTTCGTTCTTTGGTGGTGCCACCGCGCCGCTCCGGCATAACGCCGAACACATTGATTGCAGGACGGCGCGCAGCTGCAGCTCAAGGCCGTGGCGGCGGGCGCGTACCTCACCGCCGCCGACCAGGGCGGCGCCGCGGCGGTCGTCGCCAACCGGACGCAGGCGGCACCCTCCGCCTCGGAGACCTTCAAGGTTAGCCTCGCCACCGCCGCCGCCGCCGCCGCCGCTGGCTCGCCGGAGTACGGCGTGTGAGTGACTTTTGGTCTCACCGGAGTAAAAAAATCACATCACATGCATGCGATTGCACGAGCAGCTGTGGCGGATCAACGAGACGACGTTCAACTTTCGGGCGTCGAGCGGCCGGTTCGTCGGCGCCGGGAGCGACGGCGGCGCGGCGGTGGTGGCGGTGGCCGCCGCGCCGGGGCCGTCGGAGACGTTCCAGGTGGTGCGCGACGACGGCGACAAGAGCCGGGTGCGGATTAGGGCGCCAAATGGGCACTTCTTGCAGGTAATTTATTTAATTAATTAATTAATCAGATAAGAAACCGTGCGCACTGACATTCATAATGGCACGCGTGTTTATGTGGAAGAAGCACTGCCTAAGAGGAGCTACACCATTGTACTTCTTTTTTTTCGCGATTACACGAAAGACACACATACCAGGGTTGGAAATTTCGGACCGAAATTTCTCATTTCAGTCCCCTCCAATACGATATTACTTCGGCTGAAATTTTTTATTTTTTTCATAAATTTTGGTAATATTTATTCAAATTCAACTAAATTTTGTTTAAAATATTAGAAATTTTGGACCGAAATTTTCGAAATTTCGGCATTTCGGCGAGGCCCGATCAAATCGGCCTAACCGATAGGATTAACCCTGGCACATACACATATCTGGTATGAACGCATACGTAATTTTTAACATGCTTTAGAAAAAGGAATGTGCCAAACCACTGATCTCACTAAATATTTATACAAACGCATTTAGGCGTGTAGTGTTGTGGACATCAATGTTCAAACTTTTACGTGGAAAATCATATACTCACGACTTCATCATCACACCAATTCTACCTTTTTTTAATATGCTTTTTTAAATAATGCATATATCACGGTGTGAAGAGGCAGAGAGTTTTTTTCTATTATCTGAAATCTTGGTTTCGTATATTATCTGAAATCTTGGCTTCTTACTTAATAGTGGTCGTATTTAAAAACTTAACATCCATGTACTCAATTTGATTAACACACTATAAAGTTACATGGTGAATACTAGGCATCACCCTACTTCATATTAAGTGAACATGTACAATGTGGTGAGTACATGCTGTTGTACAATGCCCCTCCTATTACAATTACAATTACTCCTTGTTAAACAACACGTGACATTTCGGTTAATTTGGCAGATAGCATTGGGATCTAACTCAGTGACAGCAGATTACTACGGTGAAAGCACAAGTTGGGGAGACGATGACCCATCAGTATTTGTAGTAACAAAAGTTTTGGAGCTGCAGGGAGAGTACCAGATTTGCAATGGCTATGGTACAGCCAAGGCTACACCAATACTCAGGGTAAGATATCTCACAACCCAAGGGCCCCACTTGTCATGAAAATAGGCTTATCTTCTTGTTGATACATAGCTAATGAATCATGATATAGCATATACTTACTTGTTTCCTTAATTATATGATTTGGAATGGTCCATACTTCAGGGATATGTCTGTTTTGTTTTTTGTTGTATCTGATGTCAATGTCTATAGGGGAGAGGAAAGAAACAAGAAAACAGTAGTAGCAAGCAATCAATGCAACCGATATATAGCCCGGTGTTTACTTTGAGTTTGGAAGAAATTGTACAAATCCTGACATGCATGTGAGAGATCAGTGATCACATATGAGTTGCAAATTGCATCTATGCTATGATTACCTCTTGTACAATTCCGGTGGGCCAATTACAGGTGGAATAGTGTTTATCTTATCTGAAAGGACCTGAAATTTACTAGGCATGCAAACATGACTCCATTCTAAACTTTTTTCTTTTTGATAATGAAATTTAATCCAATATCCGTGTACATCATCATAAACTACAGAGAATTGAAGCACTCCTGTGCATCCCAAATGTGTGAAGGGGTCTGTTCATTACTACTTGGCACTTGCAGAATTCAGAGTAAAATTTTCACATACATATGCTGAGTTCAGCTTGCTTGAACGAAACTATCTTGTTTTTGTCTTGCGTTCTGTCCCGTCAAAGATTGCCAATCCAAACACTATGATTTGGTCCCAATTTTGTTGTCATAAGTGAAAGCCGAGGCCTTAGCTTGTGTGTCTGAATGATTGAGGGAACCAATTCATTAAATGATTATTGGCACTGGTCCTATATATGCCAAACAGTAGCATGATTTCTTTTTCTGAAATTTAGTAATAGACCCAGCAAAATCAATGAAAATATGTTTGCACGATTATGGTTGCTTTGTACTGATGAATTGGGATCATTTTCACTTCAGTTTTGTGAATCAATTATATATTATTTTCTGGCAGAATCATTGGAGCACATACATAGTCGAAGACGACTTCAAGTTCATCTCAGCAAGCGGGTTAACAGCAGTGCGAATTCCAGTTGGATGGTGGATTGCGAGTGATCCCAATCCTCCGGCTCCATATGTCGGAGGATCCCTGCAAACCTTGGACAATGCCTTCAAGTGGGCAGAGTAAGTCTTCACAAAATTAAATCACAATTTTGTAGCTTTAAATCGACTCAAGTAAAGTAAAGATCAACAAATGTTCAGATCATGAGCTAATCTGAACATTTCAGATTGTGAATTCGTTGTAAGGATTGTTATGAATATTCAGATTGTGAGCTAATCTCTTGTATCTGAATATAGGAAGTACAAGCTGGGCGTTATTATTGATCTCCATGCGGCTCCCGGGTCGCAGAACCCATGGGAGCATAGCTCATCCAGAGATGGCACGCAGGAGTGGGGAACATCTGATGCTAACATCGCAGAGACAGTGCAAGTGATCGACTTCCTCGCATCCAGGTCAGGGTTCTCATCTTTCACAAGGGAAATTTTTCTCACCAGTGCCAAAATCATAATTTAAATTGTTCAAACTTTTGTAGTCACTAAATATTTATAGATCATTTCTATGCCAGAAGCAACACACTTTGAGAATTTTCAAAGCAAATTGGCAGATTTCATTCAGTAAAAAGAAAAAAAAATCCATTCTGAAGTGATGAGCATGTTGATTTACAATGGACAGAAATATTCAGAGTTCTGGAAATTTCAGATATTTCAGTCCGAATCACAAACCTTTTCAAGGTCTGCTACTGAACAGTGAACAGTGAGGCAGATGTTGTAAGATAATGAACAGTAAGCCAGATATCGCTGCCATGAATTTCCTTAGATATTTCAGGACAGCAGATCTTTCATTAGCATGTAGTCTAGCAGTGAATCAAAACATACAGAACTGCGGAACTTTAAGATGTTTCAGTTCAATTCGAATCACAATTCGTTGCATGATCTGATACTGAACAGTAAGCCCCATTTTGTCATGATGAATTTCCTCGTACTGTTTTAATTCACCTTGACGTCAATAGGTACGCAAAGAGCCCAAGCCTCCTGGCAGTGGAGCTGATGAATGAACCGTTTGCACCCCGTGCCACCTTGGAGAGTCTGATGAAGTACTACCATGATGGATACAACGCCGTCAGGAAATACTCATCGACGGCTTACGTCATCATGTCGAACCGTCTGGGACCGCATGATCCAACTGAGTTTCTTCAATTTGCCAACGGCTTCCCCCGTGCCGTCATCGATGTGCACTACTACACGGTGTTCAATGACCTGTTCAATAACCTGACTGTGCAGCAGAACATTGATTTTATCAAATCAAACTTCTCAAGTGAGCTAAAAAATGTCACAACACAAAATGGCCCTCTCACCTTTGTGGGTAAGTAATAATTCTTTTTGGGTGAAAAGAGAGCTTTATTAATTACTCAAGAAACTGGTATAATTATTTTGCATTAGGATTCCTAAAAATTTCTAAAATAATGGTAGTAAGCAATCTAACATAATATGAGATATGTTCTTTTCCTGCAGGAGAATGGGTGGCTGAGTGGAGAGTACCCAATGCAACAAAGGAAGAGTACCAGAGATATGCAAAGGTGCAGATGGATGTTTATGGGCAGGCCACCTTTGGATGGTCCTATTGGACTCTCAAGAATGTTAACAACCACTGGAATCTAGAGTGGATGATCAACAATGGCTACATCTCCTTGAAAACCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018452