BGIOSGA018519

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Revision as of 02:36, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018519| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018519, complete gene.| tag = OsI_190...")
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Gene Name

BGIOSGA018519

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018519, complete gene.

LocusTag

OsI_19007

Ensembl Transcript ID

BGIOSGA018519-TA

Ensembl Protein ID

BGIOSGA018519-PA

Length

2507

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:8874453..8876959

Sequence Coding Region

8876367..8876959,8874453..8876019

Genome Context

<gbrowseImage1> name=IndicaChromosome05:8874453..8876959 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:8874453..8876959 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCAGGAGCATTTGTTAGTGCTTCAGTAGGGGTGCTGAATCCTCTTCTAACCAAGCTTTCCGCCTTGGTCGAGGGAGAGTACAAGCTGCTCAAAAGTGTGAAGAAGGATATCATCTTTTTGAGGAATGAGCTCAGCAGCATCAGTGTCTTGCTTGAGCATCTGTCGACCAAGGAGGACAAGCTTGATGGGCCGACCAAGGAGTGGAGGAACAACATGCTCGAGCTAGCTTATGATATTGAGGATTGCATCGACCTCTTCATCCACAAGTTGAGTTGTGGCGATGCGAATGCCAACTTTGTTCAGAAGATAGGAAGCAAGATAAAGAAGTTATGGGGCAAACACCAGATCACAGAGTGTATCCAAGAACTGAAGAATCGGGTTATGGAGGAGGACCAACGTCGCAAGAGGAATCAGATCGATGATTTCATCTCCGAGCCAAGTGTGGTGGAAATTGATCCCCGTCTACCGGCATTGTATGAGGAGGTGGAGAGGCTCGTGGGGATTGATGGTCCAAGGGAGAAGATCATTAAGTGGATCATGACCAAAGGCAAGCCATTAGAGCAACGTAAAGTGGTTTCTATTGTTGTTGGCATGTATCCAGAGGATTATGTAATTGATAGACAAGAACTTATATGGAGATGGATAGCTGAAGGATTCATCATTGAAGCGAAGGGAAAAACACGGGAGCAAGTAGGAGAGAACTACTTCAATGAGCTTATAAATAGAAGCTTGATCCAACCAGTTTATATCGAATATGATGGTAGGGCCAGTTGCTGCCGAGTCCACGATATTGTGCTTGATCTTATCATTAGCCTATCAACTGGACAGAATTTCGTCACAATAGTGCATGAACAACAGCATTGGAGTTCTTTCAAGAAGATTCGGAGGACCTGGTTCCCATCCAATGGCACAGATAATAGAATAGTCAAGGAGATTACGAACAACTGCTCACATGTTCGTTCGCTGTTCTTTGACAGTCCTAAACCGGAGCAAATACCACAATTTAAGAAATGCCATGCTCTGCGGGTATTGGTTCTGGATGGGTGCATGAGCCTGGAGAGCCAGCATATTAACAGCCTAACATACCTTTTCCAGTTGAAGTATCTGAAGCTCAATGTTGCAAATGTTACCGAGATGCCCAAGGATATTGGACGGCTGCAGCAACTAGAAACACTAATTATTCATGGAGGAGGACATGTCAACGAAATAAACATTCCGTCAAGTGTTTGTAGACTGCAAAAACTAGAGCGCCTAATTGTTGATTACCCAATGAGATTGCCAGATGAAATTGGATTTTTGCAAGCTTTGGAGATGCTATCTCTTTTTTACAACATAGAGTACAGCATAAAATGTTTACAAGAGCTCCGTCGGCTGACCAGACTAAGGTATCTGCGCATAAGGACGCCTTTTGGAGGTGATGTAGCAAGGTTCGAGAGGTACAAGGACGCCTTTTACATGACTCTCGATGAGTTAGGTAAAAATAGCCTTCAATCATTACATGTACATGTTACAACCAAGTTTTCAGATACATTGATGGATTCATGTTGTAGTAGTGCTCCCGGTCTCAGAGAGCTTTCTATTTCTGGCGTTGGAATATCAAAACTTTCGGAGCAGATGGTTTCCCTTTCTAATCTTGCCTATCTTGTGATCTTCTATAATACTAGAAGCAATGATCAGAAATATATCAACCTCCTTGGGTGTATACCCAAGCTTCTCTATCTTAAAGTAATATTCCCCCAAGGCGGGGAGGATGGACTCACTGTAGGCTGTGGTGGATTTCCCTGTCTAAAGGAGTTGATGTTCAGGCATAGTCGCCTGCATTGGTTGTTGTTTGAACCTGGCGCTATGCCAAAACTCCAAAGGCTTTCTATTGAGTTGTTTGCACAAAAAGCAGCATCCAACCTTGGGTTTGAGCAGAGCTTTGTGCACCTTTCCAGCCTCCAGCATCTAATCGTCGTTCTTGATTGTTCTGATGCCACTACAAGGGACGTGAAAGCTTTGGAAGATGCCATTAGGAACGTGGCCAGCATCCAGACTCGCTGTCTTACTCTCGAAATTCTAAGGCGCTATGAAGATGAAATGGTAAAGGAAGACGAAGAGGAGCAGCTAAAAGGCAGTACAGAGGGAGGTGGAACTGAAGAGCATCATATTCAGTAG</cdnaseq>

Protein Sequence

<aaseq>MAGAFVSASVGVLNPLLTKLSALVEGEYKLLKSVKKDIIFLRNELSSISVLLEHLSTKEDKLDGPTKEWRNNMLELAYDIEDCIDLFIHKLSCGDANANFVQKIGSKIKKLWGKHQITECIQELKNRVMEEDQRRKRNQIDDFISEPSVVEIDPRLPALYEEVERLVGIDGPREKIIKWIMTKGKPLEQRKVVSIVVGMYPEDYVIDRQELIWRWIAEGFIIEAKGKTREQVGENYFNELINRSLIQPVYIEYDGRASCCRVHDIVLDLIISLSTGQNFVTIVHEQQHWSSFKKIRRTWFPSNGTDNRIVKEITNNCSHVRSLFFDSPKPEQIPQFKKCHALRVLVLDGCMSLESQHINSLTYLFQLKYLKLNVANVTEMPKDIGRLQQLETLIIHGGGHVNEINIPSSVCRLQKLERLIVDYPMRLPDEIGFLQALEMLSLFYNIEYSIKCLQELRRLTRLRYLRIRTPFGGDVARFERYKDAFYMTLDELGKNSLQSLHVHVTTKFSDTLMDSCCSSAPGLRELSISGVGISKLSEQMVSLSNLAYLVIFYNTRSNDQKYINLLGCIPKLLYLKVIFPQGGEDGLTVGCGGFPCLKELMFRHSRLHWLLFEPGAMPKLQRLSIELFAQKAASNLGFEQSFVHLSSLQHLIVVLDCSDATTRDVKALEDAIRNVASIQTRCLTLEILRRYEDEMVKEDEEEQLKGSTEGGGTEEHHIQ</aaseq>

Gene Sequence

<dnaseqindica>1..593#941..2507#ATGGCAGGAGCATTTGTTAGTGCTTCAGTAGGGGTGCTGAATCCTCTTCTAACCAAGCTTTCCGCCTTGGTCGAGGGAGAGTACAAGCTGCTCAAAAGTGTGAAGAAGGATATCATCTTTTTGAGGAATGAGCTCAGCAGCATCAGTGTCTTGCTTGAGCATCTGTCGACCAAGGAGGACAAGCTTGATGGGCCGACCAAGGAGTGGAGGAACAACATGCTCGAGCTAGCTTATGATATTGAGGATTGCATCGACCTCTTCATCCACAAGTTGAGTTGTGGCGATGCGAATGCCAACTTTGTTCAGAAGATAGGAAGCAAGATAAAGAAGTTATGGGGCAAACACCAGATCACAGAGTGTATCCAAGAACTGAAGAATCGGGTTATGGAGGAGGACCAACGTCGCAAGAGGAATCAGATCGATGATTTCATCTCCGAGCCAAGTGTGGTGGAAATTGATCCCCGTCTACCGGCATTGTATGAGGAGGTGGAGAGGCTCGTGGGGATTGATGGTCCAAGGGAGAAGATCATTAAGTGGATCATGACCAAAGGCAAGCCATTAGAGCAACGTAAAGTGGTTTCTATTGTTGTTGGGTGTCTTGGAAAGACACTCTAGCTAATGAAGTGTACAGACAATACAAGGGGATTTAAGTGTATAACTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACTGGAAGACATCTCTCATGCCATCATATCGAAATGTCGTGGTTTACCATTAGCTATAATCTCCATAGCTAGCTTGCTATCAATCAAACCTGATACAGAGGACCAGTGGATGCAAGTGCACAATTCTATTGGTGTTACACTAAACTCAGACGTCGAAGTGAGAAAAATTTTGATGCTCAGTTATTATGATCTTCCTTATCCCCTGAAAAATTGTCTGTTGTATCTCAGCATGTATCCAGAGGATTATGTAATTGATAGACAAGAACTTATATGGAGATGGATAGCTGAAGGATTCATCATTGAAGCGAAGGGAAAAACACGGGAGCAAGTAGGAGAGAACTACTTCAATGAGCTTATAAATAGAAGCTTGATCCAACCAGTTTATATCGAATATGATGGTAGGGCCAGTTGCTGCCGAGTCCACGATATTGTGCTTGATCTTATCATTAGCCTATCAACTGGACAGAATTTCGTCACAATAGTGCATGAACAACAGCATTGGAGTTCTTTCAAGAAGATTCGGAGGACCTGGTTCCCATCCAATGGCACAGATAATAGAATAGTCAAGGAGATTACGAACAACTGCTCACATGTTCGTTCGCTGTTCTTTGACAGTCCTAAACCGGAGCAAATACCACAATTTAAGAAATGCCATGCTCTGCGGGTATTGGTTCTGGATGGGTGCATGAGCCTGGAGAGCCAGCATATTAACAGCCTAACATACCTTTTCCAGTTGAAGTATCTGAAGCTCAATGTTGCAAATGTTACCGAGATGCCCAAGGATATTGGACGGCTGCAGCAACTAGAAACACTAATTATTCATGGAGGAGGACATGTCAACGAAATAAACATTCCGTCAAGTGTTTGTAGACTGCAAAAACTAGAGCGCCTAATTGTTGATTACCCAATGAGATTGCCAGATGAAATTGGATTTTTGCAAGCTTTGGAGATGCTATCTCTTTTTTACAACATAGAGTACAGCATAAAATGTTTACAAGAGCTCCGTCGGCTGACCAGACTAAGGTATCTGCGCATAAGGACGCCTTTTGGAGGTGATGTAGCAAGGTTCGAGAGGTACAAGGACGCCTTTTACATGACTCTCGATGAGTTAGGTAAAAATAGCCTTCAATCATTACATGTACATGTTACAACCAAGTTTTCAGATACATTGATGGATTCATGTTGTAGTAGTGCTCCCGGTCTCAGAGAGCTTTCTATTTCTGGCGTTGGAATATCAAAACTTTCGGAGCAGATGGTTTCCCTTTCTAATCTTGCCTATCTTGTGATCTTCTATAATACTAGAAGCAATGATCAGAAATATATCAACCTCCTTGGGTGTATACCCAAGCTTCTCTATCTTAAAGTAATATTCCCCCAAGGCGGGGAGGATGGACTCACTGTAGGCTGTGGTGGATTTCCCTGTCTAAAGGAGTTGATGTTCAGGCATAGTCGCCTGCATTGGTTGTTGTTTGAACCTGGCGCTATGCCAAAACTCCAAAGGCTTTCTATTGAGTTGTTTGCACAAAAAGCAGCATCCAACCTTGGGTTTGAGCAGAGCTTTGTGCACCTTTCCAGCCTCCAGCATCTAATCGTCGTTCTTGATTGTTCTGATGCCACTACAAGGGACGTGAAAGCTTTGGAAGATGCCATTAGGAACGTGGCCAGCATCCAGACTCGCTGTCTTACTCTCGAAATTCTAAGGCGCTATGAAGATGAAATGGTAAAGGAAGACGAAGAGGAGCAGCTAAAAGGCAGTACAGAGGGAGGTGGAACTGAAGAGCATCATATTCAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018519

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA018519&oldid=47275"