BGIOSGA018520

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Revision as of 02:36, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018520| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018520, complete gene.| tag = OsI_190...")
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Gene Name

BGIOSGA018520

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018520, complete gene.

LocusTag

OsI_19006

Ensembl Transcript ID

BGIOSGA018520-TA

Ensembl Protein ID

BGIOSGA018520-PA

Length

3468

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:8864743..8868210

Sequence Coding Region

8867432..8868210,8866392..8866446),complement(8864743..8865396

Genome Context

<gbrowseImage1> name=IndicaChromosome05:8864743..8868210 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:8864743..8868210 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTAAGGTCAACCTTCCCGCTCGTCTCCCACCTCCCATCCCGCAAACCACCCCCAATCCGCCCACGCCCACCACCTGTTCGGCCCTATGCCTCTTCCGCCGCCTCGCCTCCTCCTCCTCCTCCGCCGCCGGCGTCCGCTTACGTCCACCTCCCCTTCTGCCGCAAGCGCTGCCACTACTGCGACTTCCCCATCGTCGCCCTCGGCACCTCCTCGCCCCCGACATCCCCACACGGCGGGGACGGCGACGACCCGAGGATCGCCGACTACGTCCGCCTCCTCCTCCGCGAGGTCGCCGCCACGCGCCCCGTGTCCGACGACGGGGTGCCCCTCGAGACCGTCTTCTTCGGTGGCGGCACGCCGTCGCTGGTCCCGCCGAGGCTCGTCGCCGCGGTGCTCGACGCGCTGCGGGCCAGGTTCGGGCTGTCGGCGTCCCCGGAGGTGTCCATCGAGATGGACCCCGGGACGTTCGACGCCGCCAAGCTGAGGGAGCTGGTGGGGCTGGGCGTCAACCGGGTGTCCCTCGGCGTGCAGGCGTTCCAGGAGGACCTGCTCCGTGCGTGCGGCCGCGCGCACGGCCTGCGGGAGGTGCACGACGCGGTCGGCATCGTGACGGCGTGCGAGGGGCTGCAGAACTGGAGCATGGACCTCATCTCGTCGCTGCCCAACCAGACAGAGGAGATGTGGGAGGAGAGCTTGAGGTGCACGGTGGATGCCCGTCCCACGCATGTGTCTGTCTATGACTTGCAGATCGAGCAGGGAACTAAGTTTGGGCAACTGTGGGTCGAACCTATCAGACTTACCCTAAACCCTGTTCTTGACAAAGTAGCAACTCAATCCTTTTTCATAATTAATGCTTGCAGATATACACCTGGTGTTTATCCGCTTCCAAATGAGAAAGATTCTGCAAACTTCTATAAGATAGCTTCGAAACGTCTTTCTGAAGCAGGATATAACCATTATGAAATCAGTAGCTATTGCAAGACTGGGTATGAGTGCAAGCACAATGTAACATATTGGCAAAACCGGTCATTCTATGCATTTGGTCTTGGATCCGCTAGCTACATCAATGGTATCAGGTTCTCCAGGCCCAGAAGAATGAAGGAATATGCAGAGTGGGTTCAGAAATTGGAAAATGGAGTGTGGAGCCATGAGTCTGGCAATTCTGGGATAAAGGACATGGCAATGGACGTGGTGATGCTATCACTGAGAACAGCATGGGGCCTAGATGTGCAAAGTTTCAGTAAAACCTTCGGAAGGAGTCTGACAGAGTCATTGTGCAACACATTTAGGCCTTTTGTGGAGAGTGGGCTTGTAATTGCCATGGATATGGAACGGCGAGCTTTGCAACCAAGTGAATTTGAGTTGGACTTGCAACATGATGGTGAGAATGGAAGCAGAGTTGCCTTCATCCGTCTGAGTGACCCAGATGGTTTTTTGTTGTCCAATGAGTTGATTTCACTTGCATTTGGAATTATTTCACCATAA</cdnaseq>

Protein Sequence

<aaseq>MLRSTFPLVSHLPSRKPPPIRPRPPPVRPYASSAASPPPPPPPPASAYVHLPFCRKRCHYCDFPIVALGTSSPPTSPHGGDGDDPRIADYVRLLLREVAATRPVSDDGVPLETVFFGGGTPSLVPPRLVAAVLDALRARFGLSASPEVSIEMDPGTFDAAKLRELVGLGVNRVSLGVQAFQEDLLRACGRAHGLREVHDAVGIVTACEGLQNWSMDLISSLPNQTEEMWEESLRCTVDARPTHVSVYDLQIEQGTKFGQLWVEPIRLTLNPVLDKVATQSFFIINACRYTPGVYPLPNEKDSANFYKIASKRLSEAGYNHYEISSYCKTGYECKHNVTYWQNRSFYAFGLGSASYINGIRFSRPRRMKEYAEWVQKLENGVWSHESGNSGIKDMAMDVVMLSLRTAWGLDVQSFSKTFGRSLTESLCNTFRPFVESGLVIAMDMERRALQPSEFELDLQHDGENGSRVAFIRLSDPDGFLLSNELISLAFGIISP</aaseq>

Gene Sequence

<dnaseqindica>1..779#1765..1819#2815..3468#ATGCTAAGGTCAACCTTCCCGCTCGTCTCCCACCTCCCATCCCGCAAACCACCCCCAATCCGCCCACGCCCACCACCTGTTCGGCCCTATGCCTCTTCCGCCGCCTCGCCTCCTCCTCCTCCTCCGCCGCCGGCGTCCGCTTACGTCCACCTCCCCTTCTGCCGCAAGCGCTGCCACTACTGCGACTTCCCCATCGTCGCCCTCGGCACCTCCTCGCCCCCGACATCCCCACACGGCGGGGACGGCGACGACCCGAGGATCGCCGACTACGTCCGCCTCCTCCTCCGCGAGGTCGCCGCCACGCGCCCCGTGTCCGACGACGGGGTGCCCCTCGAGACCGTCTTCTTCGGTGGCGGCACGCCGTCGCTGGTCCCGCCGAGGCTCGTCGCCGCGGTGCTCGACGCGCTGCGGGCCAGGTTCGGGCTGTCGGCGTCCCCGGAGGTGTCCATCGAGATGGACCCCGGGACGTTCGACGCCGCCAAGCTGAGGGAGCTGGTGGGGCTGGGCGTCAACCGGGTGTCCCTCGGCGTGCAGGCGTTCCAGGAGGACCTGCTCCGTGCGTGCGGCCGCGCGCACGGCCTGCGGGAGGTGCACGACGCGGTCGGCATCGTGACGGCGTGCGAGGGGCTGCAGAACTGGAGCATGGACCTCATCTCGTCGCTGCCCAACCAGACAGAGGAGATGTGGGAGGAGAGCTTGAGGTGCACGGTGGATGCCCGTCCCACGCATGTGTCTGTCTATGACTTGCAGATCGAGCAGGGAACTAAGTTTGGGCAACTGTAAGTGTTTATTGCCAATTCATGAATCTAATCCCATGTTTTTGAGTAACCGATTGGAAATTTCGGATATATTCTGGCCACATTTCTGTTAATCACTTCATGTTCTGATTCTGTTATGGGGTTTGGTTGGTATGGCAATATGGGCTATGAACTAGGAATGGAAATTAAATAATTTAGAATCATTATAATTCTATTGGGAAGAAGTTTGTATTACTATTTTGCACTTGTTTGTGTTGTTTTTAAGTTCAATGCTCTGCTCAGAACTCACTATGATGATAAACAATTATTGTAACTGGAATACGCTAAAAGGTAAAGGTTTAAGCATGAAATTGTTATTGTTGTCTCTGGCCTTGTCTCATCCAATTATGGGAAAAATATGTCTCATTAATTTGTGATATGTTAATTTGCACTGACCTTTTTATGGGAAGGTACTGATTCTCTTATGTCAGATTTGAAACGCCAGATCAGCTTTTGCCTTTACATGACTACAGATTGAGTCAAACCCTCATTTATGATTTTTTAAATTAAACAAAAACTATGATAGTTAAAATCTCTGTTGTTTTAAGTTCGGTGCTCTGCTCAGAACTCACTAGTATGATAAACAATTATTGTAGTCAATACACCAAAAGGTAAAGAGTTTAAGCATGAAATTGTTATGGTCGTCTCTGGTATGTCTCATCTGATTATGGGTAATATCCCAATACAGATTCTCTTATGTTAGATTTGAAACCCCAAGTCAGCCTTCTCCTTTACATGAATACAGATTAAGGAAAACCCTCATTTATGATTTTTATTTAAACAACAACTGTGAAAGTTAAAATCCTACACATCACTAAAACAATATTCCTCAAGTACATTTTCACCATGCTACAGCATTGGCAGGACAATTCATTGAACTTAAATAATGCAGCATGATATTATTAAAAGACTGTAACTTATTTTGAAGTTTAAAGCTGTAACTTCATCCTGTATATGTGCCTGACAGGTGGGTCGAACCTATCAGACTTACCCTAAACCCTGTTCTTGACAAAGTAGCAACTGTAAGTGTTTATTGCCAAATCATGAATCACATCCTATGTTTTTCAGTAACCGATTGGAGATTTGGGATATATTATGGCCACATGCCACATTTGTGTTAATCACTTCATTTTCTGATTCAGTTATTATGGGGTTTGGTTGGTATGGCCATATGGGCTATGAACTAGAGAATGAAGAATAAATAACTAGAATCATTATCATTCTATTGGGCAGAAGTTCGTATTACTATTTTGCACTTGTTTGTGTTGTTTTTTAAGTTCAATGCTCTGCTCAGAACTCACTATGATGGTAAACAATTATTGTAGTTAGATATAACTGCAATATGCTAAAAGGTAAAAGAGTTCAAGCATGAAATTGTTATGGTCGTCTCAGGCATGTCTCATCTAATTATGGGAAAAAAATGACTCACTAATTTGTGATATGTTAATTTGCACTGATCATTTTATGGGAAGGTACTGATTCTCTTATGTTAGATTTGAAACCCTGGGTCAGCCTTTGCCTTTACATGACTACAGATTGAGGCAAAATCTCATTTATGATTTTTAAGTATACAAAAACTAGGATATTTAAAATCTTGCACATCACTAAAACAATATTCCTCAAGTAAAAGTAAATTTTCACCTTGCTACAACATTAGCAGGACAATTCATTGAACTTCAACAATACAACATGATTTTATATAAAAAAAACTGTAAACTTCCTTTTGACATTGAAAGTTGTAACTTGATCCCATATATGTGTGTGACAGGTGTGTCCAACCTATCAAACATACCCTAAACCCTGTTCTTGACAAAGTAGCAACTTTTGATAACATCATCAACTGTTTTTGTAGTTTTCTGAATTGTCCAGCTAATGCTATAACAAGCTGATAATTGACAATATAGTTGTGTTCTTTTGCGAAATTTTACTCATATTCCTCTAATTCTAGCTGTCATTCCAACCAGTAGGAATTCAGCTCCATGTACATGGATGAGTTGATTGAATGATCAATTTACAGCAATCCTTTTTCATAATTAATGCTTGCAGATATACACCTGGTGTTTATCCGCTTCCAAATGAGAAAGATTCTGCAAACTTCTATAAGATAGCTTCGAAACGTCTTTCTGAAGCAGGATATAACCATTATGAAATCAGTAGCTATTGCAAGACTGGGTATGAGTGCAAGCACAATGTAACATATTGGCAAAACCGGTCATTCTATGCATTTGGTCTTGGATCCGCTAGCTACATCAATGGTATCAGGTTCTCCAGGCCCAGAAGAATGAAGGAATATGCAGAGTGGGTTCAGAAATTGGAAAATGGAGTGTGGAGCCATGAGTCTGGCAATTCTGGGATAAAGGACATGGCAATGGACGTGGTGATGCTATCACTGAGAACAGCATGGGGCCTAGATGTGCAAAGTTTCAGTAAAACCTTCGGAAGGAGTCTGACAGAGTCATTGTGCAACACATTTAGGCCTTTTGTGGAGAGTGGGCTTGTAATTGCCATGGATATGGAACGGCGAGCTTTGCAACCAAGTGAATTTGAGTTGGACTTGCAACATGATGGTGAGAATGGAAGCAGAGTTGCCTTCATCCGTCTGAGTGACCCAGATGGTTTTTTGTTGTCCAATGAGTTGATTTCACTTGCATTTGGAATTATTTCACCATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018520