BGIOSGA018542

From RiceWiki
Revision as of 02:36, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018542| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018542, complete gene.| tag = P0499F1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA018542

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018542, complete gene.

LocusTag

P0499F10.3

Ensembl Transcript ID

BGIOSGA018542-TA

Ensembl Protein ID

BGIOSGA018542-PA

Length

6872

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:8115396..8122267

Sequence Coding Region

8121936..8122267,8121115..8121517),complement(8120102..8120179,8119788..8119853),complement(8119369..8119434
,8117815..8117868),complement(8116016..8116066,8115815..8115874),complement(8115396..8115533

Genome Context

<gbrowseImage1> name=IndicaChromosome05:8115396..8122267 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:8115396..8122267 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAATAGAGGAGAATTCCAGAGCTCCCTGGTGCAGCAGATGATCTGGAGCGGCAGTAGTACAGGCACGGCTACCGGCGTCGGCGGCGGCGGCGGCGCCGGCAGTTTGATGGGCAGCTTGAAGCCATGCCATGAGGATCAAGAGGCCTCTCCTAACATGCCCTCCTTGTCTTCTCCATCGTTGATCTTCTCGCAGCAGTTTCAGCACAGCTCTCCAGGTCTAGTTCCGATGAACGGCGCCGCCGGCGCCGCCGCTTCTCTTCCGAGCTTGCACGACGGCGGCGGCGGCGGCCATGAGAGCAGCATGCCGGAGTCATGGAGCCAACTGCTTCTTGGGGGATTAGCAGGAGATCAGGAGAGGTACAGCGCCACTGCGGCTCTCCTGTCAAAGGGATTAGAGAATTGGGGAGATCACGCTGCTGCAGCTGCAGCCAGTGCATGCATGGTTGGTGGCATGAAGGAGGAGGGCTCCATGGCTCAAGCTGCAGCCACTGCTGCTGCTGCTGCTTACAGCTTCTATGGGAGCCACCTTGCTGGTGATCATCAGCATGAGATCCAAGCAGCAGCAGCAGGAGGAGGTGCTAGTAACAAGTCTCAGCTGAGCCAGATGCTCATGGCTTCCTCTCCTAGGTCATGCATCACCACCAGCCTCGGCAGCAACATGCTCGACTTCTCCAACACCGCGGCGCCGCCGGAGCTCCGGAGCCACCACCACAACTCCGATAATTCATCAGAGTGTAACAGCACAGCGACTGGTTCGGCCCTCAAGAAGGCTAGGGTTCAGGCCTCCTCTTCAGCACAATCTACTCTAAAGGTGAGGAAGGAGAGGCTAGGGGATAGAATAACTGCACTTCATCAGATTGTATCCCCATTTGGCAAGACTGACACAGCGTCTGTACTGCAAGAGACCATTGGCTATATCAGATTCCTCCTGAGTCAAATTGAGGCTCTGAGCTACCCTTACATGGGCGACGCCAACGGGACCGGTCCTATGCAAAATGGACCAGTTGGAGAAAGGAACCCTGGCCTCTTCCCGGAATACCCTGGCCAGTTGCTAAACCATAATGGCAACACTGGAGCACAGCAGCCTGCAGCCCAACCTGAGCAGCAGGGAGCAAACGACGATGGAAAGAAGGACCTGAGGAGCCGGGGGCTGTGCCTCGTTCCAGTGTCGTGCACGTCGCACTTTGGAGGGGACAATGCCGCTGACTACTGGGCCCCGGCGCCGCTCGGCGGGATCCTACGGTAG</cdnaseq>

Protein Sequence

<aaseq>MNRGEFQSSLVQQMIWSGSSTGTATGVGGGGGAGSLMGSLKPCHEDQEASPNMPSLSSPSLIFSQQFQHSSPGLVPMNGAAGAAASLPSLHDGGGGGHESSMPESWSQLLLGGLAGDQERYSATAALLSKGLENWGDHAAAAAASACMVGGMKEEGSMAQAAATAAAAAYSFYGSHLAGDHQHEIQAAAAGGGASNKSQLSQMLMASSPRSCITTSLGSNMLDFSNTAAPPELRSHHHNSDNSSECNSTATGSALKKARVQASSSAQSTLKVRKERLGDRITALHQIVSPFGKTDTASVLQETIGYIRFLLSQIEALSYPYMGDANGTGPMQNGPVGERNPGLFPEYPGQLLNHNGNTGAQQPAAQPEQQGANDDGKKDLRSRGLCLVPVSCTSHFGGDNAADYWAPAPLGGILR</aaseq>

Gene Sequence

<dnaseqindica>1..332#751..1153#2089..2166#2415..2480#2834..2899#4400..4453#6202..6252#6394..6453#6735..6872#ATGAATAGAGGAGAATTCCAGAGCTCCCTGGTGCAGCAGATGATCTGGAGCGGCAGTAGTACAGGCACGGCTACCGGCGTCGGCGGCGGCGGCGGCGCCGGCAGTTTGATGGGCAGCTTGAAGCCATGCCATGAGGATCAAGAGGCCTCTCCTAACATGCCCTCCTTGTCTTCTCCATCGTTGATCTTCTCGCAGCAGTTTCAGCACAGCTCTCCAGGTCTAGTTCCGATGAACGGCGCCGCCGGCGCCGCCGCTTCTCTTCCGAGCTTGCACGACGGCGGCGGCGGCGGCCATGAGAGCAGCATGCCGGAGTCATGGAGCCAACTGCTTCTGTAAACACCTCTCTCCTTCTCTTCTCTCCTTATCTATCTCTATTTTCTATATTCAGTTCATGGCCTCCTGATCATGTTCAAGCAGGGAGAGAGAGATTCAAATAAGAAACAAGCCAGCCATGCACATCCATGTAAATTAAACTATAGTTAAACAGCATACTTAAGTGTAGCTCTAGGGAGAAGGAATAAAGTGGTTAACCCACTTTGTCCTATAGTAGATCAAGCCTTTCCTAATGTTCTTCTCCTTTTCTGCTAACCCATCATCAGAGAGATATATACAAGCATGTGTTCATGCTACTAACTCTGCTGCAGTTGTTTCCATCTCCATGGACTCATGTTCTTGTGCTCATCTGTGTGTGTGCTCCTTGTGCAATCAAAGCTAATTAACTGCACTTTTTTTTGCATGCAATCAAAACAGTGGGGGATTAGCAGGAGATCAGGAGAGGTACAGCGCCACTGCGGCTCTCCTGTCAAAGGGATTAGAGAATTGGGGAGATCACGCTGCTGCAGCTGCAGCCAGTGCATGCATGGTTGGTGGCATGAAGGAGGAGGGCTCCATGGCTCAAGCTGCAGCCACTGCTGCTGCTGCTGCTTACAGCTTCTATGGGAGCCACCTTGCTGGTGATCATCAGCATGAGATCCAAGCAGCAGCAGCAGGAGGAGGTGCTAGTAACAAGTCTCAGCTGAGCCAGATGCTCATGGCTTCCTCTCCTAGGTCATGCATCACCACCAGCCTCGGCAGCAACATGCTCGACTTCTCCAACACCGCGGCGCCGCCGGAGCTCCGGAGCCACCACCACAACTCCGATAATTCATCAGAGGTAAGATTGTAATTTGATCTTGGTGTGTGTAGATCATTAGCTCTCAAGTAGTATTGGTCTTGCATCTTGTTCTCTTTTGCTTTGTCATTTTCCAAAATTTTTTTTAGATAAATGTTTGGCATTTTTTATGGCTTGTTTCAATTATACGTGCATATGCATACATAAGGCAGGATGCACTGTAGGTCTAGAGGCCAGAGATATGTATTCTTCATCTTCTATTTTCTTTTAAAAAAAATAGCTACATGGAATGCAATGGATTACCAGGTGTATCCAAAATGAGAATTTTACGTGTTTGACAGATCTTTAGGTTTTTCATCGAGTATATAAGCTATGTTCATCCCCTCTTTGAAAAGTTGCAGTTTCCAAAGCATACTTCTCTTCCTCATACTGCTACACATGTTTGGTGGAAAAGTTATAAGTTTGATCATGTTCTCCCTAATGATCCTCTAGGCCAAGGCTTTTACGGGCTGTCAATACTCAATTAATACAATCTCTTGGCAATGGTGCATTCTGTCCTCCATAGTTCCACGAATTGAAAGTGTGCTATTATTATTATTTATTTCCATGAAAAAGGTACATGTTTTCATGTCCCATGGGAAATCCACTCTGGTCAAAGTTACCACTTGATGTTTTGCATAGCATGTTCTTTTCATGATATCTTGGTAAGAGTGTTGGTCATGTATACAGTATCCATTGACAGAGCTAGCTTAACATGAGATCTTTAATTTGGTCATACTCTTAGCCTTGTTCTTCTTTATGGCTAACTGCTGTAGTAGTACATGAGAGGTCAGTGAATGTTTAGATGTAGAATCACTGGGGAGAGAATTCACTTTAGAGAGGGTAGAGAGATGTGTGTTTTTTTCTTCTTCTTCTCGGGACAAGATGAAATTGGGGTCATGATTATTCACGCTTTGCCTTTCTTTGTCTTTCTCTAGTGTAACAGCACAGCGACTGGTTCGGCCCTCAAGAAGGCTAGGGTTCAGGCCTCCTCTTCAGCACAATCTACTCTAAAGGTTTCTTCCTCATCAGCCTCCCTGCTTTCCATGGCACACAAGCCCCATCCCCCCCCCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCACGCACGCATAAAGTGTGCTTACTTTGGAAGTTCGTGCACAGAAAATCACAACATTTGGCAGTAGTTTCCATTTGGAATATCTTGGATTATGTAGTATATATGTTAACATAATCCTTACATTAGGAGGTTTCTTAGGTGTGATAATTTGTTTTCAGGTGAGGAAGGAGAGGCTAGGGGATAGAATAACTGCACTTCATCAGATTGTATCCCCATTTGGCAAGGTAACAAAAAGACATGAAACTTCAGTTAACCGCTTTCATGGTTAATTTTAGAGATTAGTAATAAGCTAGCAACAATCAGTTGCATTATATATATATAAGTATAGAGGGAGATGGATTACATCAAGATCTGAATGTGTTGTCATGCACAGTATGCAAATAGGCTATGGATGACTTAGAAAAGTTTTATTCATAAGTTGATGATGTTACATGCAATTATCTATAGTTTGTGCCATGCCATGCATCGAGCCAGTAGCAAGGTAAGAGTAGCTCCTTTATTTCTTTGTTGCTGGTTTTCACTCGAGGGGTTGTGTCCAAGTAAAGTAAATCTCTGACACACGTGCCTCCTTTTACAGACTGACACAGCGTCTGTACTGCAAGAGACCATTGGCTATATCAGATTCCTCCTGAGTCAAATTGAGGTCCAATCTCTCTCTCTCACTTTCTATAGCTCTGTCTGCGTGTGTGTTTAATTTAGAGGGTGAAAAAAAAATACTTCCCGTTATTTTTATCAAGTTCCTAATTATAAATAGATATATTCTAAAATGGAGAGAGGGGCATATATATTGCATACCCCATCCGTCTAAGAAAAAACTCAATTCCAGCTACGAATCTGGATATATGTGGGTTTGTCCTTTTTTTTTTTAAGACAGAAGAGTAGTATATGTATGGGACATTGAGATGGAATAAGTATGGGTGAACAGGGAATATTTGCACTGCAGGCAGTTGCAGCATTGTGCCAGTCTCTTCAGCTACTCTAGCTGTTTCAGCCACAGTAACATTTTTCCAAGAAAAAATAGAAAAGAAACTTCTGCCTCTGCAAAGTGGGGCCCACAGAGGAGTGTCCCCACAAGTAAGGGACAGTAGTCGTAGAGAAGGAGGTACATGTGATACTGGCACACAGTGCGGGCGGGAAACGAAAAGATGGGAGAGAATATGCATGCATGGATGCATGCAAAATGGGGGCGGGGCCGGGCTAGGTCTGAGCGGGAGCGCACGCTGTTAAAGTTAGCTGCACGGCGAGAGATGGCTCATGGTCATGGCTGTGCGTGCATGGGCTTCAGCAGCTGCATCTGCATCTGCGGCTGCAGCGAGATCGATTGATGGAGATGTCGTTTTAGCCAAGTGCAATGTCGTTGTTATCTAGTTCTTCGTCTCGTAGTGATGGGAGACCGATTAAATAGGTATTGGTTTTAAATAAATCGACACCTATAAGTCGATACCTATTAGGTGTTTTGTACTCCCTCCGTTTTTTAATAGATGACGCTGTTGACTTTTTCTCACATGTTTGATCATTCGTCTTACTAAAAAAAATTGCGTAATTATAATTTATTTTGTTATGAGTTATTTTATCATTCATAGTACTTTAAGTGTGATTTATATCTTATACATTTGCAAAAAAATTTTGAATAAGACGAATGGTCAAACATGTGAGAAAAAGTGAACGGCGTCATCTATTAAAAAACGGAGGTAGTAGTAGTGTTCTATGTCTCAAAATTTATAGTATTTGAATGTGTCACATCCAGTATTATATTGATTTTTTATAAAATAGAGGGAGTAGTTGTTTTATGTGTTTCAGAGACCAGTAGAGGATTGACACACTCTCTCTCTCTCTCTGCTCTTCTAGCTTTCTACATCTCTTGCCCTCTTTTTTCTAACTAAAATGTAGGTTTTACCTCGGTATCCGTCTGAATGTTTTTAAAATTGCTAAACCGTATATTTCGTGTGAACAATTTTTACAAATAAGTTGCTTTAAAATATTAGATAAATCTTTTCTTTTTTTCAAAATTGTAATGATTAAAACTCAATTAACCGCTAATAATTTTCTAGTTGTTCATGCCCTAGCTCTATATTTATCTTCTTAAAAAAACAAACATATGTCTCTCTTGATGACCATAGGATGTTGTTTCTTGTGTGTGCAGGCTCTGAGCTACCCTTACATGGGCGACGCCAACGGGACCGGTCCTATGCAAAATGTAAGTTCGTTGTTGCATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCATATTTACGCACGTAGTATAAGGCTATATATGAGCACAAAGAGGAAAGGAGTATCTATATACGAGCGAGAAGATGCCCTACACACGTGCAGGGGTGCCGTGAAACGCGAACTTAGGCTAGCTTTGCCTTGGCTTTGTAGATCCATACTATCATAGGTGAACAAAACTCTTTATCAAAGGCATTCTAAAAAAACCCTTTCATCAAAGGTTAGGCTGAGTAGGATCATCCTTTTGGTGACCTTTGGGGCCAAAGGCTTTAGATCTTTTATAAATCTTTATACTACGTGCATGACGGCAAGCTCTGTTCTGAAAACAAATATATATAACCTCCATGAATTTATGTGCGAATCCAGAAAATATTTTCATGTTTGCAAATCCATGCATAGTTGCACGTGTTTTTTTTCATGGAATGGAAGAAAAATTTCCTTAAAAATTGGGGCATTTGATTAGATATATATAAGAAATAGTAACTCAAAAAATTTAAAACAAGTGAGTATGTCGTGATGATTTATATGTTTAGAATAATAGATCTGAATAACCTCCCAAATTAATTAATTTTGTATATGCCACTGAATAACTACATGTCCTTTATACATGCATGAAACTCCTGCCATCAATGGCATATTGTTCAGACAATGAGGGTTACTACTGCATATATACAATATGTATAGCTATGATATATATAATTTTTTTAAAGCTTAGCATGCTTAAGGCATCAAATCGACTAGAACATATTAGCCGCTAAAAACCAATTAATATAAATGCACTCTTGTAGATGTATAAATTTTGTGTTTCTAAAGCAAAGAAAAGTTTAACATGCCAATTTTTTCTGTCTGTAAATCTATTTTTGTATAGTATAACTATATTATAATTTATTTTCTGTGTTAAATTTTTATTCTGCACATAAAATGTTCATATCTATTTGCGTAAAACTACATCGGTTATATATTATACATTTTTATTACCCGTGGAGAAGGGACATAAACCAGTAGTTTTCAATTTTTTTAAAGCATGGAATAAATTATCGATGAAAAGTCTACAATGTTGGATATCAAGAAAATTAAGACCCTACTTAAGAGTTTAAATTTCTCATAAACTGATTGAAAAATATTCAAGAAAAATTATACCTTGTGTCCATATTTATTTTCAAAAAAAAAATTGATAGCTACTAAATCCACTTTACTATCTCATATATTAAATTAATCATAGGTTCATATAAAAAAGTATTCCTGTACAAAAAGGTTTCACGCAATATATCACCTCGCAAGATTTCAACTTAAAATATAACTTATATAAGGAGAATAAAAAAGAGGAATGCCATTTGCAATTAAGTAAAGTGTCTTAGTTCAGTAGTTCAAGTGAAGCAGCAAAATAGTTCATCGTAGTAAAATTGACTTCTCCATTTTAAAACTTTCAAACAGCTTAGTACAAGATTAATTGTGTCATCATCACATGACAGAAAAAAAAAACCCATGCAAAGTACACAGACATGGATAAGATAGATATTACCACCATAACGTTCTTAGTTTAGTTGACATTGGCCATATGCATCTGAGACAACCATGGGCCAGTACAACTCATGGGTTCAATCATTTTACCACACCCAAAAAAATATTCTCCCCTCAGCTTTTTTGCACGCTTGTACGTGCAACGTTGACATGTGACACAGTTACTTTCCTTTTGATTTTATAGGGACCAGTTGGAGAAAGGAACCCTGGCCTCTTCCCGGAATACCCTGGCCAGGTTAGTGTAGATCTGTACATGCACATGATTATTAATTCTTATAGATATAAGAATATAATCTATCTATATAGATATTCCTTTCCAGCTCCAAGCCACTTTTTTCCTTATATCTTTTTTGTTTGTGTGTGGTTCCTTGTGCAGTTGCTAAACCATAATGGCAACACTGGAGCACAGCAGCCTGCAGCCCAACCTGAGCAGCAGGTATGTATGCTCTTTGCTTAGCTTCAAAGCCATTTTCACAATGATGTATATACATGAGTACTGTGTCGACTAGAGTGCATGGCATGTTGTTATATATAAGTTTTCAAGGGCAAAATTAATACCATACTCATATGTTTCTTTTCCCTTTTTTTCACTAAACGCACCTACATATAGTTACTATATATACTGATAATAGTTGCGAAAATTAACATGCATGTTACTAGCTCCTATATGTATTTTTTCTGTATAATAATTTCATGGCATTTGATAATTGTTATTAGGGAGCAAACGACGATGGAAAGAAGGACCTGAGGAGCCGGGGGCTGTGCCTCGTTCCAGTGTCGTGCACGTCGCACTTTGGAGGGGACAATGCCGCTGACTACTGGGCCCCGGCGCCGCTCGGCGGGATCCTACGGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018542

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA018542&oldid=47298"