BGIOSGA018557

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Revision as of 02:37, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018557| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018557, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA018557

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018557, complete gene.

LocusTag

OSJNBB0043H23.11

Ensembl Transcript ID

BGIOSGA018557-TA

Ensembl Protein ID

BGIOSGA018557-PA

Length

4925

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:7849231..7854155

Sequence Coding Region

7853885..7854155,7853313..7853392),complement(7851162..7851626,7850885..7851010),complement(7850675..7850800
,7850011..7850568),complement(7849701..7849808,7849231..7849599

Genome Context

<gbrowseImage1> name=IndicaChromosome05:7849231..7854155 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:7849231..7854155 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGTACGGCGGCGGGCGGGAAGGAGGAGGAGGGATGAACGGCAACGGGACGGCGTACGCGGGGGCGCTGTCGCCGGCGGCGAGGTACGCGGAGTCGGGCGGGGCGAGCCTGACGTGGGAGAACCTGACGGCGGTGCTCCCCGGCGGCGGCGGGCGGGCGACGAAGAAGCTGGTGCAGGGCCTGTACGGCTACGCCGTCCCCGGCAGGGTGGTCGCCATCATGGGGCCCTCCGGCTCCGGCAAGTCCACCCTCCTCGACGCCCTCTCCGGGAGGCTGGCCAGGAACGTGCTCCTGACAGGGAAGGTGCTTCTCAACGGCAAGAAGAGGCGACTCGACTATGGCGTCTTGGCGTACGTGACACAAGAGAACGTGCTGCTGGGGACGCTGACGGTCCGGGAGACGGTGACCTACTCGGCGCTGCTCCGGCTGCCGTCGACCATGTCCAAGGCGGAGGTCCGGCGGGTGGTCGACGACACGCTCGACGAGATGGGGCTCCGGGAGTGCGCCGACCGGAACATCGGCAACTGGCACCTCCGGGGGATCAGCGGCGGCGAGAAGAAGCGGCTGAGCATCGCGCTGGAGATCCTCACCCGCCCCAGGCTCCTCTTCCTCGACGAGCCCACCAGCGGCCTCGACAGCGCCTCCGCCTTCTCCGTCATCGAGACGCTCCGCCAGCTCGCCGTCGACGGCGGCCGCACCATCGTCTCGTCGGTGCACCAGCCCAGCAGCGAGGTCTTCGCCCTCTTCGACGACCTCTGCCTCCTCTCCAGCGGCGAGTGCGTCTACTTCGGTGACGCCAAGCTTGCTCCACAGTTCTTCGCGGAAACAGGGTTCCCCTGTCCTAGCCGGAGGAACCCGTCCGATCACTTCCTCCGGTGTGTCAACGCCGACTTCGACGACGTCGCCGCCGCCATGAAAGGATCCATGAAGCTGCGAGCAGAGGCAGATTTTGATCCGTTACTCAAGTACTCCACGTCAGAGATCAGAGAACGGCTGGTGGACAAGTACAGGATCTCCGAGTACGCCATGATGGTCAGGAACACGATACACGAGATCAGCAAAATCGAGGGAGTGATCGAGGAGGTGGTGATGGGGAGCCAGGCGAGCTGGTGCAAGCAGCTGACGACGCTGACGAGGCGGTCCTTCACCAACATGTCGCGCGACTTCGGCTACTACTGGCTCCGGATCGTCATCTACGTCCTCATGGCGGTGTGCCTGGGCACCATCTACTACGACGTCGGCACGAGCTACGCGGCGATCCAGGCGAGGGCGTCGTGCGGCGGCTTCGTGTCCGGGTTCATGACCTTCATGTCCATCGGCGGCTTCCCGTCCTTCATCGAGGAGATGAAGATGTTCACGCTGGAGCGGCAGAACGGCCACTACGGCGTGGCCGCCTACATCATCTCCAACTTCCTCTCGTCAATGCCGTTCCTGCTCGCCGTGTCCTGGGCCAGCGCATCCATCACCTACTGGATGGTCAAGTTCAGGCCCGGGTTCAGCTACTTCGCCTTCTTCGCCCTCAACCTCTACGGCGGCGTCTCCGTCATCGAGAGCCTCATGATGATCATCTCCGCCCTCGTCCCCAACTTCCTCATGGGCCTCATCCTCGGTGCTGGCGTCATTGGGATCATGATGCTGACTTCTGGATTCTTCCGGCTGCTTCCGGAACTTCCAAAGATCTTCTGGCGATACCCGGTGTCCTACATTGTCTACGGCTCGTGGGGTTTGAAAGGAGCGTACAAGAACGATCTGATCGGGCTGGAGTTCGAGCCGATGATGCCGGGGCAGCCGAAGCTGACGGGGGAGTACATCATCACCAAGATGATGGGGCTGAGCCTCAACCACTCCAAGTGGCTGGACCTCTCCATGATCTTCGTCCTCCTCTTCGCCTACCGCCTCATCTTCTTCCTCGTCCTCAAGGCCAAGGAGGCCGCCGCGCCTTACATCCGCGTCGCCTACACCCGCTTCACCATCAAACGACTCGAGCGCCGCGCCTCCTTCAGGAAGACGCTCGCCATGTCGTCCATGTCCAAGCGGCACAACCAGCCGCCACACCCCATGGCCGTCCAGGAGGGGCTCAACTCTCCAATGCCATACTGA</cdnaseq>

Protein Sequence

<aaseq>MEYGGGREGGGGMNGNGTAYAGALSPAARYAESGGASLTWENLTAVLPGGGGRATKKLVQGLYGYAVPGRVVAIMGPSGSGKSTLLDALSGRLARNVLLTGKVLLNGKKRRLDYGVLAYVTQENVLLGTLTVRETVTYSALLRLPSTMSKAEVRRVVDDTLDEMGLRECADRNIGNWHLRGISGGEKKRLSIALEILTRPRLLFLDEPTSGLDSASAFSVIETLRQLAVDGGRTIVSSVHQPSSEVFALFDDLCLLSSGECVYFGDAKLAPQFFAETGFPCPSRRNPSDHFLRCVNADFDDVAAAMKGSMKLRAEADFDPLLKYSTSEIRERLVDKYRISEYAMMVRNTIHEISKIEGVIEEVVMGSQASWCKQLTTLTRRSFTNMSRDFGYYWLRIVIYVLMAVCLGTIYYDVGTSYAAIQARASCGGFVSGFMTFMSIGGFPSFIEEMKMFTLERQNGHYGVAAYIISNFLSSMPFLLAVSWASASITYWMVKFRPGFSYFAFFALNLYGGVSVIESLMMIISALVPNFLMGLILGAGVIGIMMLTSGFFRLLPELPKIFWRYPVSYIVYGSWGLKGAYKNDLIGLEFEPMMPGQPKLTGEYIITKMMGLSLNHSKWLDLSMIFVLLFAYRLIFFLVLKAKEAAAPYIRVAYTRFTIKRLERRASFRKTLAMSSMSKRHNQPPHPMAVQEGLNSPMPY</aaseq>

Gene Sequence

<dnaseqindica>1..271#764..843#2530..2994#3146..3271#3356..3481#3588..4145#4348..4455#4557..4925#ATGGAGTACGGCGGCGGGCGGGAAGGAGGAGGAGGGATGAACGGCAACGGGACGGCGTACGCGGGGGCGCTGTCGCCGGCGGCGAGGTACGCGGAGTCGGGCGGGGCGAGCCTGACGTGGGAGAACCTGACGGCGGTGCTCCCCGGCGGCGGCGGGCGGGCGACGAAGAAGCTGGTGCAGGGCCTGTACGGCTACGCCGTCCCCGGCAGGGTGGTCGCCATCATGGGGCCCTCCGGCTCCGGCAAGTCCACCCTCCTCGACGCCCTCTCCGGTATCCTTTCTTCCTTCCTTTGCCACCTCCATCTCTCTTTGCTTCATGCATGCTCAGCAGCAAAATCAAAATAAATATTCTTTTGAGGAGATTAGCAATTTAACATGGTTTAAATTCATGGAACAGTTAATTTTTTTGCGTTGATTTTTGTGATAGGATTTGTATTCAAGGCAAGGATTTTTGATAGATGGGATATTGGGGTTGTTTTGAGTGTGGCATCCCATTCCATTTCACCCCATGTACTGCACGAATTTCACCCCATGTACTGCACTTCTTGCTGGCTTGCTCCATGCATGCCCAGCAGTCAAAAAATAAAAAAATAAATCAAAACGCGGTTTATCAATGAATTCTTTTTTCGAGGAAACATGGTTTGAATTCATGGAACAGTTCAAATTTCGCATTGATTTCTGTGCCAGGATTTGTATTTTAAGGCAAGGATTTCTGATAGATTGATATGGGGTTGATTGATTCTGTTTTTGAGTATGGCTGCAGGGAGGCTGGCCAGGAACGTGCTCCTGACAGGGAAGGTGCTTCTCAACGGCAAGAAGAGGCGACTCGACTATGGCGTCTTGGTGAGTTTGCTAATTTAGCTCACAATTTCAACATGCAGATGCTCATACAATTTCTAACTTTTTTCACTCTGAATCTTACTCATCAACCGTATTCATGTTTTTTCTATTGCTGATTAATCAATTCGTCAGCTTGATTAGAGTGTTCCAAGTTCGACGCTGCTTGAGTGTTAAATTACGCACGAATTTATCACTGATACTACATCTTAACCCCACTAGCTGCAAGGACGAAGAATGTGGACTTAACCCAGGGAACAAATATAGATTCAGATCTTGTTTGGAATTGAAGGAGTGTAGGATAAATCGCAGATTTGACGTTGGGGTGTGTGAGACTTCCTGATGACTGGCAGAACTATCACACGTGTAGCCACTCGGTGCGCCGACTCGGGGTATTCGACGGCTAAGGATGCATAGATAGATGTATGGCACCTAGCTAGATACAGTCATAGAGTACAGTACTGAGCATGGCATCCCATGTGCACACTCTTTAATTTTAGGTGAAGCATTGGAACAAATGCAATTATGCTTGGTACCAAAGTAGTGTATACCAAACCAAAGCAAGCCATTAATTTAGCTAGTTAGGGTGCAACAAGGCTTTTTATTTGATCTGCTGGTGATTGCTTAGTTCCTCCCATGTTCATGGTTTCCTCTTCAGAGTTCCTATGTTCCTTTCACTTTGAATACAGGAATGTACTAATTTTGCTTGTCTTATCTTCAAATTAGTATATATTGCTTAAAAATATCACTGTGAGTCTCTTGTAGCAGTCTGTATAGTTGCACTCAGAATGGAGTGTGAGAGGGACAGTTTGGTGCTGCCCAACTAATTTTTCATTTATGCCAATTAATAAGAGGACACATGTATAGCATATCAGCATTACAAATGTAGTTATGAGTCTCTTTCATATGTTTCAATATGTGCACGCATGCACTGTCACTGATATTTCAAAGCCAGATGGGCTTCTAAATTAATACAGTATCAGATACCCGATCCCTCCGGCCGGTCATAAAAATATGTCGTTTTCAACATCCTAAGTCAAACTTTTGAAACATTAAACATTTCTATCTTTTAGATATTTGGGTTAGATATGTATGAAAATCATAAAATCCGTTGATGAAAAGTACTTTTTGTAATATTGCAATATTATTCGGTTTTGCAATGGCAGAATTAATTATGACAGCTTCGTATAGTTGACTGCTGAAGCGAGAGAGGTCGATCAGAAATCACTTAATTGCTAGTGCTACTAACTCTGCATCAATTCCTACAATTTCATAACAGTTTTAGGAGCTATCTGATTTCCTTGGAAGACCCTTTTTACATGATGACTGATTGATTAATTTCAAATCTATTACATACTATACTATATTAGTACTATAAGTTTTTTTTTTTGCGTAATAGTATAAGCTAATTTCACTAGCTTTTTTACTATAAATTGAAAGATTGCTTGAGATTTTTAAAGCCCTCTGGAACCACAGTAATTTTCATAAAAAATTTTCATAGAATTCATAGCTAGTCAACGACATGATTCTCACATACACATAAATACCACAGAATTCCTCATCATTGGCAAATCTGAGTGTGCCTATCATTTCAAATTTAACCACTATGGTAAAATTTGATTTGCTGAGGTAACTTAAATCAAATAACCAATCAATTAGTGATGTAGTAATAACACGGGCATATGATGACAGGCGTACGTGACACAAGAGAACGTGCTGCTGGGGACGCTGACGGTCCGGGAGACGGTGACCTACTCGGCGCTGCTCCGGCTGCCGTCGACCATGTCCAAGGCGGAGGTCCGGCGGGTGGTCGACGACACGCTCGACGAGATGGGGCTCCGGGAGTGCGCCGACCGGAACATCGGCAACTGGCACCTCCGGGGGATCAGCGGCGGCGAGAAGAAGCGGCTGAGCATCGCGCTGGAGATCCTCACCCGCCCCAGGCTCCTCTTCCTCGACGAGCCCACCAGCGGCCTCGACAGCGCCTCCGCCTTCTCCGTCATCGAGACGCTCCGCCAGCTCGCCGTCGACGGCGGCCGCACCATCGTCTCGTCGGTGCACCAGCCCAGCAGCGAGGTCTTCGCCCTCTTCGACGACCTCTGCCTCCTCTCCAGCGGCGAGTGCGTCTACTTCGGTGACGCCAAGCTTGCTCCACAGGTGTGTGATAAATCTTCAGAGAAAAGTACTTGTAGTAATAATCTTCCTTTTTGTTTTCTCCAATTAGCAATGAACAAGTAGATGATGATTATAAAATGAGTTTTAGATATAATTTATGTGATGGTTTCTGTAATTGTTGCTGTTCCTGCAGTTCTTCGCGGAAACAGGGTTCCCCTGTCCTAGCCGGAGGAACCCGTCCGATCACTTCCTCCGGTGTGTCAACGCCGACTTCGACGACGTCGCCGCCGCCATGAAAGGATCCATGAAGCTGCGAGCAGTATGTCCAGCTGCTGAAGAGATGTTTGTAAATGTGATTTTTATCTGATGGAACTGAATTCCGACAATTTTGTGTTCTTTTCAGGAGGCAGATTTTGATCCGTTACTCAAGTACTCCACGTCAGAGATCAGAGAACGGCTGGTGGACAAGTACAGGATCTCCGAGTACGCCATGATGGTCAGGAACACGATACACGAGATCAGCAAAATCGTAAGCACAAACCTGAATCTCTTACCACATCCAAAATTAAGATTAATTCAAAATAAAAATGAAAAACCTGATCAAACATTCCAAAAATTCCAAACGCAAAATGCAGGAGGGAGTGATCGAGGAGGTGGTGATGGGGAGCCAGGCGAGCTGGTGCAAGCAGCTGACGACGCTGACGAGGCGGTCCTTCACCAACATGTCGCGCGACTTCGGCTACTACTGGCTCCGGATCGTCATCTACGTCCTCATGGCGGTGTGCCTGGGCACCATCTACTACGACGTCGGCACGAGCTACGCGGCGATCCAGGCGAGGGCGTCGTGCGGCGGCTTCGTGTCCGGGTTCATGACCTTCATGTCCATCGGCGGCTTCCCGTCCTTCATCGAGGAGATGAAGATGTTCACGCTGGAGCGGCAGAACGGCCACTACGGCGTGGCCGCCTACATCATCTCCAACTTCCTCTCGTCAATGCCGTTCCTGCTCGCCGTGTCCTGGGCCAGCGCATCCATCACCTACTGGATGGTCAAGTTCAGGCCCGGGTTCAGCTACTTCGCCTTCTTCGCCCTCAACCTCTACGGCGGCGTCTCCGTCATCGAGAGCCTCATGATGATCATCTCCGCCCTCGTCCCCAACTTCCTCATGGGCCTCATCCTCGGTGCTGGCGTCATTGTAAGCTAAAATAACCTGCACATTTCTATTAATTGCTACTCTCTTCGTTTCAAAATATAACAATCTAAGATCCGTACTAGAAATCTGACATAACTCCTATCTAGTTCTAGATTGCTATATTTTGGAATGGACGGAGTATTACTGAGGAATGCCTTTTCTAGCTTGTATGCTGAATCTTTCCATGGATGTATATATGATGTAGGGGATCATGATGCTGACTTCTGGATTCTTCCGGCTGCTTCCGGAACTTCCAAAGATCTTCTGGCGATACCCGGTGTCCTACATTGTCTACGGCTCGTGGGGTTTGAAAGTAATTGACTTCTGAATGACTTACCATGTGCATTCTTACTTGGTGCAGAGACCGAAGTTACGACAATGGTGCTAATCACTCTACCTGCATTGGAATTGCAGGGAGCGTACAAGAACGATCTGATCGGGCTGGAGTTCGAGCCGATGATGCCGGGGCAGCCGAAGCTGACGGGGGAGTACATCATCACCAAGATGATGGGGCTGAGCCTCAACCACTCCAAGTGGCTGGACCTCTCCATGATCTTCGTCCTCCTCTTCGCCTACCGCCTCATCTTCTTCCTCGTCCTCAAGGCCAAGGAGGCCGCCGCGCCTTACATCCGCGTCGCCTACACCCGCTTCACCATCAAACGACTCGAGCGCCGCGCCTCCTTCAGGAAGACGCTCGCCATGTCGTCCATGTCCAAGCGGCACAACCAGCCGCCACACCCCATGGCCGTCCAGGAGGGGCTCAACTCTCCAATGCCATACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018557

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA018557&oldid=47313"