BGIOSGA018727

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Revision as of 02:39, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018727| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018727, complete gene.| tag = P0685E1...")
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Gene Name

BGIOSGA018727

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018727, complete gene.

LocusTag

P0685E10.8

Ensembl Transcript ID

BGIOSGA018727-TA

Ensembl Protein ID

BGIOSGA018727-PA

Length

3238

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:4366972..4370209

Sequence Coding Region

4370122..4370209,4369120..4369452),complement(4367764..4368155,4366972..4367301

Genome Context

<gbrowseImage1> name=IndicaChromosome05:4366972..4370209 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:4366972..4370209 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCTTTTTTCAGTTTATCCTCCGCCACTGCCCTAGGATGGGTGGCCTGGTCACGAGGAGCTAATTATGGTGTTGAAGATGAGATAGGACCAGAAATATACCTAGGCCATCTGAAGCAGTTCATGATCAAGGAGATCAAAGAAGCTACCAATAACTTCGACCGAAGAAACATTTTGGGGCAGGGAGGATTTGGAATAGTATACAAGGGTCGCTTGCGCGATGGCACAATTGTTGCTGTTAAAAGGATGAAAGATTGTTTTTCTGTTTGTGGGGATGATCAGTTCCACACAGAAGTTGAAGTAATAAGCTTGATTGTTCATCGCAATCTCCTTCGTCTTACTGGGTTCTGTATTACAGACACTGAAAGGCTCCTTGTATACCCTTTCATGCCAAATGGAACTGTTTCTTCTAAATTACAAGAATATGTGGGTGGTAAACCTACTCTAGACTGGACAAGGAGAAGGAAGATAGCGCTAGGCGCGGCACGCGGGTTGGTCTATTTGCATGAGCAATGTGATCCGAAAATTATCCACCGCGACATAAAGGCCTCCAATGTTCTCCTTGATGAGTATTTTGAAGCAGTTGTGGCAGATTTTGGACTTGTAAAACTTTTGGATCATGGTGAGTCTCATGCTGTCACAGCAGTGAGGGGGACAATGGGACGCATTCCTCCAGAGTATTTGATGACTGGCCAAACATCAGAGAAGACCGATGTTTACGGCTTCGGATTCTTGTTGATCGAGTTAATCACCGGTCGGAAAACGATGGAGCTTCATGAGGATGAGTATCAGGAGGGAGGAATTCTTGATTGGGCAAAGGAGCTTCTTGAAGGAAATAAGCTAAGGTCATTTGTGGACAGTAGACTGAGAGACAACTATGTCATTGCTGAGTTGGAGGAAATGGTTAAGATAGCTTTGCTCTGCACAATGTACAACCCTGACCAACGACCAAGTATGGCTGAGATTGCTGGAATGCTGCAAGAGAGTGATGGTTCAGTTGTGGAGAAATGGGAGACTCTGAAAGATGCCGAGAGATCGAAACCGAGCACGCCGGAGTTCATGCTGTCATCCCCTGTAAATTTTGCTTCAGATGAGTGCAATTCAATTCAGTTGGAAGCTGTTGAGCTCTCAGGGCCAAGGTGA</cdnaseq>

Protein Sequence

<aaseq>MPFFSLSSATALGWVAWSRGANYGVEDEIGPEIYLGHLKQFMIKEIKEATNNFDRRNILGQGGFGIVYKGRLRDGTIVAVKRMKDCFSVCGDDQFHTEVEVISLIVHRNLLRLTGFCITDTERLLVYPFMPNGTVSSKLQEYVGGKPTLDWTRRRKIALGAARGLVYLHEQCDPKIIHRDIKASNVLLDEYFEAVVADFGLVKLLDHGESHAVTAVRGTMGRIPPEYLMTGQTSEKTDVYGFGFLLIELITGRKTMELHEDEYQEGGILDWAKELLEGNKLRSFVDSRLRDNYVIAELEEMVKIALLCTMYNPDQRPSMAEIAGMLQESDGSVVEKWETLKDAERSKPSTPEFMLSSPVNFASDECNSIQLEAVELSGPR</aaseq>

Gene Sequence

<dnaseqindica>1..88#758..1090#2055..2446#2909..3238#ATGCCTTTTTTCAGTTTATCCTCCGCCACTGCCCTAGGATGGGTGGCCTGGTCACGAGGAGCTAATTATGGTGTTGAAGATGAGATAGGTAGGTGGGGGAATTGACAGGTGGTGCCGATTGTGTCCGAAGAGAGGCATGAGTGGGATATGGGTGGCCATGGCATTTTTTTATGTGCTGAAAAGTATAGGTGAGGGAGAGATCCAGAGCTTGTTAATCTTGATCTGCAGTAGGACATTTAGATATTAGACTTTCTAGAAAAATATATTATAATCTTTCTGCACCTTTTTTTAAAGATATTCTATCATGTGCACTGACTCGAAAAGTTTGATATTCATATTTTTGTGTGGATCTCTTTCCCTTTGACCATTGATTTAGCTTTGCTACCATTTGGTACATGGTTAACAACTGGATATAATATATGAGAACCAATTCAATGCTGATAAGAAAATCCTAATAGTGCAGAGGGGTCGAACTGCATTAACATTTCACATAACTAATCATATTTTTGTGTTGATACTAGTCATGCCCATGCATGGTTGCTTTTCATATATGCTTATGTATAGTTTTCCCATTTTTGTCTTTTTAGATTAAAAACACCAACAATTTCTAAGTATGATACAACATTTGGGCTCTAGCCAAATACCGTGTTTTCCTCAGTTTAGGCATTTTAACTATTTCTTCAATAGCATGACTATAGAGTTATGTTAATTTTACTGTGCAGTACTCTGATTCCTGAATGTGATCATATTTATCCAGGACCAGAAATATACCTAGGCCATCTGAAGCAGTTCATGATCAAGGAGATCAAAGAAGCTACCAATAACTTCGACCGAAGAAACATTTTGGGGCAGGGAGGATTTGGAATAGTATACAAGGGTCGCTTGCGCGATGGCACAATTGTTGCTGTTAAAAGGATGAAAGATTGTTTTTCTGTTTGTGGGGATGATCAGTTCCACACAGAAGTTGAAGTAATAAGCTTGATTGTTCATCGCAATCTCCTTCGTCTTACTGGGTTCTGTATTACAGACACTGAAAGGCTCCTTGTATACCCTTTCATGCCAAATGGAACTGTTTCTTCTAAATTACAAGGTTAGTCCCATGCTTCAGTATATTCTTTTGTCATTTATGCATGATGTACACTGACACACATGGGGCATGCCAAAGTCCTATTTTTCTCAAAGTCCTATATTTTCTAATGGATGTAAAGTATAGATGTTAATTATACAAGGCAGTAATATATTTCTCAAAAATATGTACTACATGTTAGTTTTTTTCATTAAAAAACTATAGTGCACTTTCTGAATATATCAAAGTTAAAGTTGGTGTGTACTTGAGATTTGCCTTGATTTTTCAAAATGAAAAGAAAATATTGATAGCCTACCAATCAAAGATGGAACACTATAATAACATAATATACCTTAGCTAACCATATGTAAGGTGATTATACATGTTGTCCTTGCCTTATTTGCAAATGTTTATGTAAGGTGGTCTATATTTTACCATCACATTTGTTTTCTTGGTCTATGCATATTATACTGTTAATGGTACAAGTGCTAAAAACTATGTGCATCTTGTGTACTGTCATTATTGTCTCCCTCCAAAGGATGTATAACAAAAGGTATCTATTAGTTGATACATGATGTTTCTAAACAATCAGATGTTTTTTTTTAAGTGTCCTTGGGATTTACCCTTTCTCTGACAGACTGACATTCATGTTTATTTTCAGTATTTTTAGACCGAATATAAATACATTGACCCGGCATTTGGGAGAAAGCCAAAAGATATATAGTACAGAGTTCTTTATTTTCAGTTGTTCTGTTCTTTCTTTAGATTAGAGTCATCATGTTTGTTTTTGTTTGTTCCTATAGACTTCATTACATATATTTGTGTTAGTATGAAACTGAGTCAATAGGGCATTGACTGGTGAAAAGAATTATATGAAAATGATGTATAAGTTCTTCATTCATTGCCACACACAAACAATGTTTTCTGAACTAAGTATTTTCATTTTCTATGAGCAAATTGAACTAACTGTTTTTCCTCACTTTGTCAGAATATGTGGGTGGTAAACCTACTCTAGACTGGACAAGGAGAAGGAAGATAGCGCTAGGCGCGGCACGCGGGTTGGTCTATTTGCATGAGCAATGTGATCCGAAAATTATCCACCGCGACATAAAGGCCTCCAATGTTCTCCTTGATGAGTATTTTGAAGCAGTTGTGGCAGATTTTGGACTTGTAAAACTTTTGGATCATGGTGAGTCTCATGCTGTCACAGCAGTGAGGGGGACAATGGGACGCATTCCTCCAGAGTATTTGATGACTGGCCAAACATCAGAGAAGACCGATGTTTACGGCTTCGGATTCTTGTTGATCGAGTTAATCACCGGTCGGAAAACGATGGAGCTTCATGAGGATGAGTATCAGGAGGGAGGAATTCTTGATTGGGTAAATTACTAGCTACTCCCTGTTTTTTTTCCCTCTACAAGTTCAGCTTATTCTGTTCCATAATTAAAAAAGTGTGATGTTTTGATTTAGTTCATTTCCACAAGTTCCATAGCTTTAACTCCTAATATTGTACATACTTGGTTGTGTTCATGCCAATAGAATACAATCCAATGGTACAAAATAGTATATCAGCAAACTGAAATATGACAAAAAAACACATTTATGAAAATATTATCTTGGTTGAGAGAAAAAATATCAATGGAGAAAAAAATTGAAGATTAACATTTGTTAACACATATACCAGTGTGAAACTTTGGCCAAATATGGAAATAAGTAACTCCACTGTACAAGATCTTATTTATGCACATGCACTTCAATAATTCTCAAAAACAATGTTTCTTAGTTTATTTCAATTGCCATGAACTGCTATTAATCACACACAATCGTGCATACCTATTGCAGGCAAAGGAGCTTCTTGAAGGAAATAAGCTAAGGTCATTTGTGGACAGTAGACTGAGAGACAACTATGTCATTGCTGAGTTGGAGGAAATGGTTAAGATAGCTTTGCTCTGCACAATGTACAACCCTGACCAACGACCAAGTATGGCTGAGATTGCTGGAATGCTGCAAGAGAGTGATGGTTCAGTTGTGGAGAAATGGGAGACTCTGAAAGATGCCGAGAGATCGAAACCGAGCACGCCGGAGTTCATGCTGTCATCCCCTGTAAATTTTGCTTCAGATGAGTGCAATTCAATTCAGTTGGAAGCTGTTGAGCTCTCAGGGCCAAGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018727