BGIOSGA018729

From RiceWiki
Revision as of 02:39, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018729| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018729, complete gene.| tag = P0685E1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA018729

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018729, complete gene.

LocusTag

P0685E10.4

Ensembl Transcript ID

BGIOSGA018729-TA

Ensembl Protein ID

BGIOSGA018729-PA

Length

4378

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:4331811..4336188

Sequence Coding Region

4335889..4336188,4335630..4335746),complement(4335413..4335513,4334511..4334582),complement(4334142..4334223
,4333962..4334042),complement(4333064..4333108,4332722..4332787),complement(4332485..4332634
,4331983..4332111),complement(4331811..4331846

Genome Context

<gbrowseImage1> name=IndicaChromosome05:4331811..4336188 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:4331811..4336188 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGCCGCCGCGGAGGTGGATGTACGGGCGGGGCGGCGGGAAGGGGAAGCCGGCGGGGCTGCTGCTGCTGGGGGTGTTCCTCTGCTTGTCGGTGGTGCTGCTGCTGCTGCTGCACGGCTCGTCCCCGTCGCTGGAGGGCGAGGGGAGGAAGCCTGAGGCGGTGGAGGCGGCGGGGGGAGGGGGAGAGGAGGAGGAGGTGGCGGTGGCGCGGGCGGAGGTGGAGGAGGCGCCGCTGCCGCCGGGGAACGCGCGGCTCGCCTTCCTCTTCATCGCCCGCAACCGCCTCCCGCTCGACCTCGGTGACAAGGAAGGGAGATTCTCCATCTTCGTGCACTCGCGGCCGGGGTTCGTGCTCACCCGCGCCACCACCCGATCCGGCTTCTTCTACAATCGGCAGGTCAACAACAGCGTCCAGGTGGATTGGGGGGAGGCGAGCATGATCGAGGCTGAGCGTGTTCTACTCGCCCACGCGCTCAAGGACCCCTTAAACGAGCGCTTCGTGTTCGTCTCCGACAGCTGTGTGCCATTGTACAACTTCAACTACACTTACGACTACATAATGTCTTCGTCAACCAGTTTTGTTGACAGTTTTGCTGATACAAAAGCGGGTCGGTATAATCCCAGAATGGACCCAATTATCCCAGTGGAAAATTGGAGAAAAGGCTCGCAGTGGGCTGTGTTAACAAGAAAACATGCTGAAGTTGTGGTTGAAGATGAAGAGGTTTTGCCAGAATTCCAGAAGCATTGCAGGAGAAGGCCCTTACCAGAGTTCTGGCGGGACTGGGATCGTCCTATTCCTGCGGAGGCATGGAAGGCACATAACTGCATACCAGATGAGCACTATGTTCAAACATTGCTTGCACAACATGGTCTTGAAGAAGAGCTTACACGGAGGTCAGTTACACACAGTGCGTGGGATCTATCATCTTCTAAAGATCGTGAAAGGCGTGGATGGCATCCTGTAACATACAAAATCTCAGATGCTACTCCTGCACTTGTAAAATCCATAAAGGATATTGATAATATATATTATGAGACTGAAAATAGAAAGGAGTGGTGTACAAGTAATGGAAAACCAGCACCTTGCTTCCTTTTTGCAAGGAAGTTTACACGAGCAGCTGGTCTGAAGCTTCTTGATTTATCTTTGATAGCAGCAAATGGCGCATCTACCATGTAA</cdnaseq>

Protein Sequence

<aaseq>MKPPRRWMYGRGGGKGKPAGLLLLGVFLCLSVVLLLLLHGSSPSLEGEGRKPEAVEAAGGGGEEEEVAVARAEVEEAPLPPGNARLAFLFIARNRLPLDLGDKEGRFSIFVHSRPGFVLTRATTRSGFFYNRQVNNSVQVDWGEASMIEAERVLLAHALKDPLNERFVFVSDSCVPLYNFNYTYDYIMSSSTSFVDSFADTKAGRYNPRMDPIIPVENWRKGSQWAVLTRKHAEVVVEDEEVLPEFQKHCRRRPLPEFWRDWDRPIPAEAWKAHNCIPDEHYVQTLLAQHGLEEELTRRSVTHSAWDLSSSKDRERRGWHPVTYKISDATPALVKSIKDIDNIYYETENRKEWCTSNGKPAPCFLFARKFTRAAGLKLLDLSLIAANGASTM</aaseq>

Gene Sequence

<dnaseqindica>1..300#443..559#676..776#1607..1678#1966..2047#2147..2227#3081..3125#3402..3467#3555..3704#4078..4206#4343..4378#ATGAAGCCGCCGCGGAGGTGGATGTACGGGCGGGGCGGCGGGAAGGGGAAGCCGGCGGGGCTGCTGCTGCTGGGGGTGTTCCTCTGCTTGTCGGTGGTGCTGCTGCTGCTGCTGCACGGCTCGTCCCCGTCGCTGGAGGGCGAGGGGAGGAAGCCTGAGGCGGTGGAGGCGGCGGGGGGAGGGGGAGAGGAGGAGGAGGTGGCGGTGGCGCGGGCGGAGGTGGAGGAGGCGCCGCTGCCGCCGGGGAACGCGCGGCTCGCCTTCCTCTTCATCGCCCGCAACCGCCTCCCGCTCGACCTCGTCTGGACGCCTTCTTCCGCGTAAGCGCGCGCCTCGCCCGGATCTCCCCCTTCCTCTCGCTCTTGCTCGGATGGCTCCCAATTTCAGCGAATGCTGGTTTAATTTGAATCCTGATTGCATTGCGTTTTTTGGGGGTGAGTAGGGTGACAAGGAAGGGAGATTCTCCATCTTCGTGCACTCGCGGCCGGGGTTCGTGCTCACCCGCGCCACCACCCGATCCGGCTTCTTCTACAATCGGCAGGTCAACAACAGCGTCCAGGTTCGCGACCTCGTCCCCACTTCCGTTGGCAATGTGATGTGATCCGTCGGTAGCAGCATCCGTTGCAGTCCACACTGGGTTCCTGATGAGTTGGGCATGTGTGATTTGTCCTTCAGGTGGATTGGGGGGAGGCGAGCATGATCGAGGCTGAGCGTGTTCTACTCGCCCACGCGCTCAAGGACCCCTTAAACGAGCGCTTCGTGTTCGTCTCCGACAGGTATGGATTATGGAATTATGATGTGTGCTAGTGTGTATGCTTGGATAAAGTATTACTGACTTTAGATACTAAGTTGATTGGCACAAAATTTTGGCAATGCCCAAAAAATTTAGTCATGTGTTCTGTTTATAGCCAAAAATTAAGCACTACTAAATTATTTGTCTTGGTTGAATAGCAAATGCAAGTTTAGTAGAAGCAAATGAATGCCTAGCCAGTTTTTGCCAGAAAATTTGGCAATGGCCAGTTCTTGCCATTGCCAAAAAAATTGGTAAGGCTATGAACCAAAACAAGCCCTAACTGCAATCTGTGTTGGCTTAATCTCTTGTTCAGCACAATGTGTTGTTTCTAGGTTCTGATCATAATGAATTAAGGGAATGTTCCTGAACATAATGATATGTCCTTACATTTTTATAAATGTGGACTGTTATCTAGTAAAGATTGTTTGTTTTTTTTAATCATCGTTTGGCTAACTAATTTTTTTTTCCAATATGCAATGCTCAGATGATAAGTAGTTTCTGTCCGCGATTTTAAGCTCATGCTAAAAATGTGGTGCGATAGCAGTCCTCAATCTTAAATTCCATGGAAATGAATCTTGTGTTATACTGTTAGTCTGTTTCTATTAAGTTTAACGGGACTCCACATGAAGCTGTACTGAATTTACCAGATGCCTTGGTGCAATTTTAGGTATCGTTTACACGGTTGTTTTTCTGACAGCTCCAAATTTGAACTTAGTACTACACATCTTTTTTTATAATCTTACAAAGCTCGTTGTTGCACCATTTTGGATCTTAATTGGATTCATGCTTACTAGGATCTTCTCTCTCTGCCAGCTGTGTGCCATTGTACAACTTCAACTACACTTACGACTACATAATGTCTTCGTCAACCAGTTTTGTTGACAGGTATAGGCATCACAATTTCGTGTTGTGTTTCCTGATGATGGTTAAGACTTAAGAATGAATTCTGAGTTCATGACAAGTATCAGCTAGTAACTATGAATGTTAAAGAAAAGAAAGAAAAAAAATCATGTTAGCCTTTCTCATTTTCCATTATCTAAGTATTTCCATGTACCTTGAGCTTCAAAATGGTTCCTGTAGCAAACTGCAGATTTGCAGCTTAAAGCACCTTTCATTTAGCTTGTATAATATCCTGGGTATTAACAGCATCCAATTGCATATGCTGGGGACAGTTTTGCTGATACAAAAGCGGGTCGGTATAATCCCAGAATGGACCCAATTATCCCAGTGGAAAATTGGAGAAAAGGCTCGCAGGTACCTTTCTGTTTCTATTGATGAAAGATAGGAGAATTTTGCTTGAACTGTGTAACAGTTAGTTTTGATACCTTATCACCATTCATTTGTGCCATACAGTGGGCTGTGTTAACAAGAAAACATGCTGAAGTTGTGGTTGAAGATGAAGAGGTTTTGCCAGAATTCCAGAAGCATTGCAGGGTATGTGACTCAATATTTATGCACTCTATGCAGATAAATTTCAGTATTGTATAACATAGTTTACTCATGATCATAACTGACCAGTGAACTTTTTCACCTTGTACCTTTCATCAAATTAAAATCAGGATAACAGAAGTTGAAAATTTGAATATTATCAATATTTACTTTTTTATGACAGTTTTTTGCATTCGCAAGTGAATGTGCTCTCAAGATAATCAACATAGGACACAAAGAAACTTGTAGATTTATGTAAACTGCCACGTATGGTACTGACATTCTGACAATGTTTACGACAATGCATGATATCAGTGATTTATTTTATTTTATTTTTTAAACCTTTTTAATTTTTATTTTTAAAAATAAATCATTCGAAAACTTATTTCCAAGATCTAAACCTTTTGGCCGTAGTTGGTTGGCAAAACAACATTGCCACACCGGTCTGGCTGGCATGGCAGCGTTGTCTTGCCACACCACCGTGGCTGGCAGGACAAAACTGTCACGCCCGTTGCGGGTGACGTGTCAGTGTTGTTTTGTCACACCAGGCAGGCTAGCTTGGCTAAAAGGTTCAGATTTTGGAAATATTGTAAAATTGTCATGCCCATTGCGGGTGACGTGTCAGTGTTGTTTTGTCACGCCAGGTGGGCTAGCTTGGCCAAAAGGTTCAGATTTTAAAATTAAAAAGGTTAAAAAAATAAAATAATTCGATACTAGTACCTTTGCCAAATGAATAGAAGATCCACCGGATTTTTCTATATCATCAACCCAAGTTACTTAACTCATGTCTCTTTCCTATCAATTAGCTTAGAGTTGTCTATTCTTGTTCCTATTAAATGTACCTTTTTATTTATTGCAGAGAAGGCCCTTACCAGAGTTCTGGCGGGACTGGGATCGTCCTATTGTAAGTGAAAGTCTCCAATAAAATACTGAACTGTCACTTAGCTTGTTGAACTTGCTTTTATGTGTTTATTTTTGAACTGCAGCTGGCACATTGAGTATAATAATCACAACTCTTGTGCTATTTCTTGTACTCCATAAAAAGCTTAATTAACAGAATTATTATCTATGGCTTCAAAATTTACCACTGAACTCTATATCTCTATCTAATTGCTCTACTGTTCCAGAACAAAGTTTAATTAGTAATTCTGTGAGACTAAATGCTGCTCATTTTATCCAGCCTGCGGAGGCATGGAAGGCACATAACTGCATACCAGATGAGCACTATGTTCAAACATTGCTTGCAGTAAGTCAACAATCATTTACAGTATCCCTTGCAGCTGTTCCTCCTCACAAAGACATCTGACCGTTCAATTATTTTTATCGAATGCAGCAACATGGTCTTGAAGAAGAGCTTACACGGAGGTCAGTTACACACAGTGCGTGGGATCTATCATCTTCTAAAGATCGTGAAAGGCGTGGATGGCATCCTGTAACATACAAAATCTCAGATGCTACTCCTGCACTTGTAAAATCCATAAAGGTATATGTTTCTTTGCAATGGCACATTTTTTGTTACCTGAAAGTGGTGATTATATAGTATGTACATTTAAAAAGGAAATTAAGAGAGGCTTTACTTTTTTTTCTTTTATTTGAAAATTCTGTCATTATTAAAATATTTAAGTACAAAGCAACAACCAAGGTGAATGTTGGAACCTCTGTTGGGTAATGGCAGACGCTATCAATTCATCTGTTTCAAAGCTTTAACAAATGTCAGTTTGGAAATGTGTTGCGTCTGATAAGGAATGTCAGCTTTTGTTTGTCATGTATACAGTTCTGCCAAAACAAGCTGCCCGTACGAAATGCACATGACATTTTCTAACTATTCACTGAGTACCTATTTGTTGAATTTTTAGGATATTGATAATATATATTATGAGACTGAAAATAGAAAGGAGTGGTGTACAAGTAATGGAAAACCAGCACCTTGCTTCCTTTTTGCAAGGAAGTTTACACGAGCAGCTGGTCTGAAGCTTCTTGATTTAGTAAGTTCAGGACCTTTAGCTTTTCATTTCATATCGTGATGCAAACACAGGCATTCCTAAACCTAATGTATTGTCTAACGAAATCACATTGTGATTTGCTTATAGTTTTTGCTCTCTCCAAATTTCCCTTTTGCAGTCTTTGATAGCAGCAAATGGCGCATCTACCATGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018729

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA018729&oldid=47485"