BGIOSGA018768

From RiceWiki
Revision as of 02:40, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018768| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018768, complete gene.| tag = OsI_185...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA018768

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018768, complete gene.

LocusTag

OsI_18551

Ensembl Transcript ID

BGIOSGA018768-TA

Ensembl Protein ID

BGIOSGA018768-PA

Length

6157

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:3685720..3691876

Sequence Coding Region

3691378..3691876,3687689..3687874),complement(3687400..3687554,3686960..3687230),complement(3685720..3685817

Genome Context

<gbrowseImage1> name=IndicaChromosome05:3685720..3691876 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:3685720..3691876 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGAGCGCGATGAACGGCTGCGGCGGCGGAGGCGGCGGCGGCGGCGGCGGGGTGATGAAGAGGATGGGCCTTCTCCGTGTGCAGTACTACTGCGTGATGGGCTTCGTCGCCGCCGCCGTCGTGCTCGCCACGCTCCGCTACATGCCTGCCCCCGCCACCGCGCCCCCCACCGTCGACGGCGGCGGCGCAACCGTCCGCTCCTCCGCCGCCACCGTAGACTCAGCCGCGGCGGCGGCGGCGGCTGCTCCCGGCGGCGGCGGGGTGGAGCGGGGCAAGGGCAAGCGGAAGCACGTGTGGAGCGGGGAGGAGGAGGAGGTGGCGGCGGAGAAGAAGGCGGCGGCCGGGGTGGTGGTGTTCAACTTCGGCGACTCCAACTCCGACACCGGCGGCGTGGCGGCGGTGATGGGGATCCACATCGCGGCGCCGGAGGGCCGCGCCTACTTCCACCACCCCACCGGCCGCCTCTCCGACGGCCGCGTCATCCTCGACTTCATCTGTGAGAGCTTGAACACTCACCACCTCAGCCCGTTCATGAGGCCACTGGGAGCGGATTACAACAACGGTGTGAATTTCGCCATCGCCGGCTCGACGGCAACACCGGGAGAAACCACATTTTCGCTTGATGTGCAGCTTGATCAGTTCATATTTTTCAAGGAGAGATGCTTGGAGTCCATCGAAAGAGGTGAGGATGCCCCAATTGATAGCAAAGGGTTTGAAAATGCCCTCTATACCATGGACATAGGGCACAATGATTTAATGGGCGTTTTGCACTTGTCCTATGATGAAATTCTTCGAAAGCTTCCTCCCATAGTTGCTGAAATCAGGAAAGCCATTGAGACTTTGCATAAGAATGGGGCCAAGAAGTTTTGGATACATGGAACGGGTGCATTGGGTTGCCTGCCTCAGAAGCTTGCTACGAGGGGGGAAATTGATCGTGATCTCGACGAGCATGGCTGCATCACAAGAATCAACAATGTTGCCAAGAGGTTCAACAAGTTGCTGAGCGAAACCTGCGATGATCTGCGCTTGCAATTCGCAAGCTCGACGATCGTCTTCGTGGACATGTTCGCCATCAAGTATGATCTTGTTGCCAACCACACGAAACACGATTGCAGGGCTCCTTTGATATACAGGAGTTCTACAGAATTCTCGCAGGAATCAGTTCGATCTCTAAAAAAACAAAAGGCAAAATTCATCCGTTCCTAG</cdnaseq>

Protein Sequence

<aaseq>MASAMNGCGGGGGGGGGGVMKRMGLLRVQYYCVMGFVAAAVVLATLRYMPAPATAPPTVDGGGATVRSSAATVDSAAAAAAAAPGGGGVERGKGKRKHVWSGEEEEVAAEKKAAAGVVVFNFGDSNSDTGGVAAVMGIHIAAPEGRAYFHHPTGRLSDGRVILDFICESLNTHHLSPFMRPLGADYNNGVNFAIAGSTATPGETTFSLDVQLDQFIFFKERCLESIERGEDAPIDSKGFENALYTMDIGHNDLMGVLHLSYDEILRKLPPIVAEIRKAIETLHKNGAKKFWIHGTGALGCLPQKLATRGEIDRDLDEHGCITRINNVAKRFNKLLSETCDDLRLQFASSTIVFVDMFAIKYDLVANHTKHDCRAPLIYRSSTEFSQESVRSLKKQKAKFIRS</aaseq>

Gene Sequence

<dnaseqindica>1..499#4003..4188#4323..4477#4647..4917#6060..6157#ATGGCGAGCGCGATGAACGGCTGCGGCGGCGGAGGCGGCGGCGGCGGCGGCGGGGTGATGAAGAGGATGGGCCTTCTCCGTGTGCAGTACTACTGCGTGATGGGCTTCGTCGCCGCCGCCGTCGTGCTCGCCACGCTCCGCTACATGCCTGCCCCCGCCACCGCGCCCCCCACCGTCGACGGCGGCGGCGCAACCGTCCGCTCCTCCGCCGCCACCGTAGACTCAGCCGCGGCGGCGGCGGCGGCTGCTCCCGGCGGCGGCGGGGTGGAGCGGGGCAAGGGCAAGCGGAAGCACGTGTGGAGCGGGGAGGAGGAGGAGGTGGCGGCGGAGAAGAAGGCGGCGGCCGGGGTGGTGGTGTTCAACTTCGGCGACTCCAACTCCGACACCGGCGGCGTGGCGGCGGTGATGGGGATCCACATCGCGGCGCCGGAGGGCCGCGCCTACTTCCACCACCCCACCGGCCGCCTCTCCGACGGCCGCGTCATCCTCGACTTCATCTGTGAGTTCCTCCTCCTCCCAATCCTAATCTCAAATTTTAAATCTGATTCGAAGTGCAGATTAATTTGGATTTTAAATGCGTATGCGTTCTGTTTTTTATTAGTGTTCGAGCTTAGATGGCTTGGGATTTATTTAAGTTTAATTAGTCCTTTTCTACTTAGCGTGATATTGACTGGCTTGGAAGTTGGAACTCTGTTTTATTGTCATCGTTAGATTACTTAATAATAAGCATGGTTTAATTTAATTAAACCTCTATCGGTGGAGAGGTTGTGGTCGGTTGGTTTGTGAAATTTTAGGAGAGTTTAAACTTTTTTATACGGTTGTTTGGTGCATAGATCATAGCCATAAATTTTTGAAGTTGCCACACTTTCTTAGTACTCGGCTAGCTATAGTCAGATAATTTATAATTGGGTTAATTAGATACATGCCATGAAAATTTTGCCGGTTTTAAAATATGCCATTACTATTTACGTATTTGAAATGATGCCATTGCTATTTATTGTAATCTCAGTGGTGCCACTAAGATACGTATTTTACATGTATAGGACGAAAATGCCCTCATCTTCTACCTCTCTCCCTCTTCTCTCATCTTCTAGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACTGGGTACATATAAACATTTTCTTTTGAAAAAGATAATGTTACACCGGGGTGTTCTTGCGTACTCCCTCAGTCCAAAAAAAAAAAGCAAACCCTAGGTCTTATATGAAAATTTTTTATAATTCGTATTTTTATTGTTGTTAGATGATAAATATGATTAATATTTTATGCATGACTTGTCTTTTTAATTTTTTTCATAATTTTTTCAAATAAAACGGACGGTCAAACGTTGGACACGGAAACCAGGGTTGTCTTTTTTTTTTGGACGGAGGGAATAGCTTCTTCAATTGTAAGGCACAAGCGACAGTTACATAATGTATAGTGGTGGTACCAGCCCATTGTACCGCTTACAGTTATGCTTATCTATACGGCTTGTTAATAATTAAAAAATAATTTGTATGTAAAACTTTTATATATATATTTTTAGCGATTTAAAAGTAAATGTTGTAAAATAAACTATGATGAAAAAACAACAACTCTAAAATTGTTCAAACTTTAAATTTTTATAAGTATAAGTATAAGTGAAACGATATGGCTTTACCTCTGCTTGGTGAAGTTTGATATATTCACTTGTGATTGTCAAAGGTTCCTTGTAGTTCAGAATTCAAGTTCTTTCATGGTAGATTGGTGATTTGTTTGGAACGCATGAATTTCGTAAAAAAAGACTTCTTCTTCTTTGTACTAGTACTATGGCCTTGTTTAGTTCCAATTTTTTTTTTCAAACTTCTAACTTTTCCATCACATCAAAACTTTCCTACACATACAAACTTCCAACTTTTTCGTCACATCATTCCAATTTCAACCAAACTTTCAATTTTAGCGTGAACGAAACACACCCTATCTTTTATCACGATGATTCCTCCAGCATTCTGCATTAGGAAGCTGTCACGGATCAGCAAAAGGAAACTGAAGGAGGAAGGAAAGCGTGTTACACTGTTACTTGAACCTAACTTTCTCTGTCGTCTCCTATACTAGTACTACTAGATGGTCCGACACTTCCAGTGTGGTCACTGATTCCACCATTCACACCATATCATCAATATGATGCCTTCATTCTGTCTGATCTCTTCTGCCTAATATTCCCATAATTCCCAGAAGAAAATCTCCCTCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAAATGGAGAGGAATTAATTGCCTGTGCCACATGCCGAGAAGGCAAGAACGCTAGAACTACTTCTACTTGCCAGTTGCCACCAGTTTCAGGCTCTTCCATGACATTAATAACTCCCGCCATTCTCGCTCAACTACCGTTCCAGTGATGCTAGCTAGAGTTGTTCATTCACTTCATTGAAATATATATATGCTAGCTGAGCCGGGGTTTACGAAACCGGCGAAAACCGGACTTTCTGGGTCAAATTGGGAAAGGTTTCCCAAGTCAAGTTAACAAAATCAAAGTATATTTTAATTTTTTGACAAAATTTAGTTGGATTTCACCGATAATCAAATGGTATTTGCGAAAAGCCGAAAAGACTACTCTGGTCCAGTTCTGTGAAGCCTGAGTGGAGCCACGAGTTTCAAAGAGATATTGTGCTCAGCTCAACACGCTATTCTGGTATCTCTTCCACTCCGTGGGCAATCAATTCTCTGCACGGACACATTCTTTTCTCCATGCATCCGCATGCCCTCCTGTTTCCTCCTGTTCCATTGTGATTGAGATGCACACTTACTAGCGTAGTCGTAGGAGTGTGTTGGTTTTCTGGGCACGCTCGTATTTTCTTCTTAAATACTCCCTCCATCTACTTTTGATAGTTATATTTTTAAATCTGAAATATTTATTTTTAATTGACATATTTCAATCCAACAACTTATCATCTTAATGGCTTTCTTGTATTTAATGCGTAACTCTTCATTCTTCCACATAAGATTGACTACCTGGGCATCGAGAAATATAAATATTAATGAATCGCTTGTTTACGAGAAATGACCAGTGACATGTTTAAATGGATGATAAGCAGAATCACTTATCCTTAGTCTGTGTGCCAAGATGAAATATGACTATCAAAAGTAGATGAATGGATTACTTGCCACTAAGTTACATCTTGATTGACTAGTGTTTTTTTTTCCTTGGTGTTTTTGTTGTCCTAGAGAAAACTTATGAGCTAGTCACGCTTTAGTTTTCGTCCCCATGTTAGTACTGTACTACTAAGCATGGAGTACTAATCTTTGTGTACTCACCCACCTTTTCAATTTAGCTGTAGATTATAAATGAGAGAAAAAGAAAAAGAAGAGCTGTTGCATCACAGATTTTTTTAGCAAGGTGAAAAAAAAAATATTGTTCTTATGCTTGCTACTACCTTATAAATAGAAGTTGAATTAGTTGAGTAAACCGAATGCGACAGACGTACCGGTCGCCTCTCGATCACGGTGTGTTGCCTTTCAGTTTACTGCAAATAAATGCACAGGTCACCAGTGCAGTACCGGGTCATGTAGCTCTCAAGTGCATCTCACTCAACAGCTCAGCTGCATTCTTAAGCATGGAACCTTGTTTCTTCAGGACCACCTCGTTGTTTTAGCACAAGTGAGATGTAAATCACTATTAGATTTTGTTTTTTCCTTTTGTAAGGGCAATTGGAATCTTGTGCATGTGCTGCCCATCTTTTTGCCAGTTCTTGTTTATCTTTCAACTGAAAGTGCAAACAAACCATTTGCAGAATGTACCTTTGGTTGTCTGTTTTCGGTTGTACAAAAACTTTATTCCTCTTAATGCAACGATACACTATCCTTGCGTATCCCCCCTCCCTCTCAAAAAAAAAAAAAAAAAAAAAAACTCTGAACTTTCTACCTGATGATCTGTGGTGGTGTGACATGACATTGTTTTTCAGGTGAGAGCTTGAACACTCACCACCTCAGCCCGTTCATGAGGCCACTGGGAGCGGATTACAACAACGGTGTGAATTTCGCCATCGCCGGCTCGACGGCAACACCGGGAGAAACCACATTTTCGCTTGATGTGCAGCTTGATCAGTTCATATTTTTCAAGGAGAGATGCTTGGAGTCCATCGAAAGAGGTCGGTTTGATCTTAATTTGGTGACATTTTGTTCTAAGCAAAGTGTTCCTTTTTTGCGCAATTAATTGGGTTTCCGACTTATTTGCATTGTTTTGGAGTGACAAAGTTGCTTAATTTTGGTGAATGTCATCCAGGTGAGGATGCCCCAATTGATAGCAAAGGGTTTGAAAATGCCCTCTATACCATGGACATAGGGCACAATGATTTAATGGGCGTTTTGCACTTGTCCTATGATGAAATTCTTCGAAAGCTTCCTCCCATAGTTGCTGAAATCAGGAAAGCCATTGAGGTACATTTGGTTCAAGTCAATAAAACAGTAGCACATATGATAAATTATTCTCAGTAAACAGCTCAAATTTTTATCTAAACTTCTCCCTTAAACCAGTAAGTTCTGAAGTAAAAAAAAAATACTATCAGTTATTCAGAGAAATGATCATTGAACCCTTGCCAAACTGCAGACTTTGCATAAGAATGGGGCCAAGAAGTTTTGGATACATGGAACGGGTGCATTGGGTTGCCTGCCTCAGAAGCTTGCTACGAGGGGGGAAATTGATCGTGATCTCGACGAGCATGGCTGCATCACAAGAATCAACAATGTTGCCAAGAGGTTCAACAAGTTGCTGAGCGAAACCTGCGATGATCTGCGCTTGCAATTCGCAAGCTCGACGATCGTCTTCGTGGACATGTTCGCCATCAAGTATGATCTTGTTGCCAACCACACGAAACACGGTAAGTTAACCTGTCAATTCTATGAGCCAAACATTCAGCAACTAAAATGGTACATCTGGACCTAGTGATTTCGACATCCCGAAAACTACAGGCTTTCAAAACAATGACTGGTCTATAACTAATATTATTTGTCAGTTCAAGCAAGGGGCCTCATGTTTGCCCTATGGCTTATAAGTTGCTGCCAAAATTTAAATTTAAAAATTTAGTTTTGAAGTTAATTTGATGTTTTCTCAACCTAGTTTCTTTTTCAGCATCTGCTTTTAAGTCGCTAAGGGCATTTATACAAAAGTTTTACTCATAAATTATTTTTGGATGGCTAATAAACCTTTATGGCTTATAATCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGGAATTCATTTGATTTCAGGCCCTTTTCGGTCATTGAGGAAGAACAGAATATGAAGAATTTCAAAATTTTATTTTTTTCTGTACACTATGGGGTGTGTGTGTATATCCTACGGGGGTTGATACGTGCAGGTTAATACTATGTATAATTCTTTTCTTTAATTTTGATAAATAAATAGAGATGAATCTATAAATTTAAATCAGAACTCCCCTTGCAGTGAGTATGGCACGTTCAAACCCAAAATAGAAAATACAAGTGAACTAAGGCCTGTTTTAGTTCCTAACTTTTTCTTCAGACTTCTAACTTTTCCATCACATCAAAACTTTTCTAGACAAAAATTTCTAACCTTTGTCGTTTCAATTTCAATCAAACTTTCAAATTTGATGTAAACTAAAGACACATTAAGAGTATTGTACAATCCAAACAAATAAAAAGTAACTTGCTGTCCTCTACTGACAAAAAATATAAACAAAGGGAGATGCATCCAAGTTTCAGGTTTTAACCGTATACTGAATGGAGTCTGTACCAAGCTGGCCACGTTTCAGGCAAGAACTCTCTGGTACTTTGATCTTGTTGGTCCTCAGTTTGATAGCAAAAACGCAAAATGGATATGAAAGTGTAATAAAATTACAACTTTGCCATTGCATTGAACAAATATTTCCTTGTACCATGCTAGTACTAAAGGATTACAAGGTTCTCATGCTATATACTGTTCAAGAAAATCATTGACATATGTACTTTATTTGCAGATTGCAGGGCTCCTTTGATATACAGGAGTTCTACAGAATTCTCGCAGGAATCAGTTCGATCTCTAAAAAAACAAAAGGCAAAATTCATCCGTTCCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018768