BGIOSGA018770

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Revision as of 02:40, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018770| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018770, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA018770

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018770, complete gene.

LocusTag

OSJNBA0017J22.8

Ensembl Transcript ID

BGIOSGA018770-TA

Ensembl Protein ID

BGIOSGA018770-PA

Length

3599

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:3672111..3675709

Sequence Coding Region

3675265..3675709,3673156..3673341),complement(3672849..3673003,3672479..3672740),complement(3672111..3672358

Genome Context

<gbrowseImage1> name=IndicaChromosome05:3672111..3675709 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:3672111..3675709 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCATGGCGAGCCCCACCAACGGCGGAGGTGGAGGCGGGAACAAGGTGATCAGCCTGCGCCTGCAGTACTACTGCGTGCTCGCGGCGGTGGTGGTGGCGGTCATGGTGCTCTCGCTCGCGTTCGTCTCGCCGTCCGCCATGGGCGCCGCCGTCAGGCAGAACCTCGGCTCCGTCGTCGCCGCCACCGCCGCCGCCGGAGAGGGAGCGGACGCCTCCGCCGCCGCCGCCGGAGCCGGAGTGGCGGCTACAACGGCCGCGGAGGAGGAGCGTGAGCAGGCGGCGGCGGCCGGGGTGGTGCTGTTCAACTTCGGCGACTCCAACTCCGACACCGGCGGCGTGGCGGCGGCGGGGGGGATCCGGATCATGCCGCCGGAGGGCCGCACCTACTTCCACCACCCCACCGGCCGCCTCTCCGACGGCCGCGTCATCATCGACTTCATCTGTGAGAGCTTGAATACACGTGAACTGAACCCATACCTGAAGTCAATTGGTTCAGACTACAGCAATGGTGTCAACTTCGCTATGGCTGGCTCAACAGTATCACACGGCGTCTCTCCCTATTCCTTGAATGTCCAAGTCGACCAGTTTGTGTACTTCAAGCACAGATCCCTGGAGCTCTTCGAACGAGGGCAGAAAGGGCCAGTGAGCAAGGAGGGCTTCGAGAACGCTCTATACATGATGGACATCGGCCACAACGATGTGGCTGGTGTGATGCACACTCCATCTGATAACTGGGACAAAAAATTCAGCAAGATCGTCAGTGAGATCAAAGACGCGATTCGGATTCTGTACGACAACGGCGCGAGGAAGTTCTGGATACATGGCACCGGCGCCCTTGGCTGCCTACCTGCACTGGTGGTGCAGGAGAAGGGTGAGCACGACGCCCATGGCTGCCTGGCGAATTACAACAAGGCTGCACGGCAGTTCAACAAGAAGCTGAGCCACCTCTGCGACGAAATGCGGTTGCAGCTGAAGAACGCCACCGTCGTGTACACCGACATGTTTGCCATCAAGTACGACTTCGTCGCCAACCACACCAAATATGGGATCAAGTGGCCGTTGATGGTGTGCTGCGGCAACGGTGGGCCTCCATACAACTTCAAGCCAGGGAAATTTGGCTGCGATGATCTCTGCGAGCCAGGATCAAAGGTGCTAAGCTGGGATGGTGTGCACTTCACTGATTTTGGCAGTGGCCTCGCGGCTAAGCTCGCGATGAGTGGTGAGTACTCCAAGCCCAAAGTGAAGCTGGCAAGCTTGGTCAATGCTGGCTCCAATAAATCATCCGATTCTTGA</cdnaseq>

Protein Sequence

<aaseq>MAMASPTNGGGGGGNKVISLRLQYYCVLAAVVVAVMVLSLAFVSPSAMGAAVRQNLGSVVAATAAAGEGADASAAAAGAGVAATTAAEEEREQAAAAGVVLFNFGDSNSDTGGVAAAGGIRIMPPEGRTYFHHPTGRLSDGRVIIDFICESLNTRELNPYLKSIGSDYSNGVNFAMAGSTVSHGVSPYSLNVQVDQFVYFKHRSLELFERGQKGPVSKEGFENALYMMDIGHNDVAGVMHTPSDNWDKKFSKIVSEIKDAIRILYDNGARKFWIHGTGALGCLPALVVQEKGEHDAHGCLANYNKAARQFNKKLSHLCDEMRLQLKNATVVYTDMFAIKYDFVANHTKYGIKWPLMVCCGNGGPPYNFKPGKFGCDDLCEPGSKVLSWDGVHFTDFGSGLAAKLAMSGEYSKPKVKLASLVNAGSNKSSDS</aaseq>

Gene Sequence

<dnaseqindica>1..445#2369..2554#2707..2861#2970..3231#3352..3599#ATGGCCATGGCGAGCCCCACCAACGGCGGAGGTGGAGGCGGGAACAAGGTGATCAGCCTGCGCCTGCAGTACTACTGCGTGCTCGCGGCGGTGGTGGTGGCGGTCATGGTGCTCTCGCTCGCGTTCGTCTCGCCGTCCGCCATGGGCGCCGCCGTCAGGCAGAACCTCGGCTCCGTCGTCGCCGCCACCGCCGCCGCCGGAGAGGGAGCGGACGCCTCCGCCGCCGCCGCCGGAGCCGGAGTGGCGGCTACAACGGCCGCGGAGGAGGAGCGTGAGCAGGCGGCGGCGGCCGGGGTGGTGCTGTTCAACTTCGGCGACTCCAACTCCGACACCGGCGGCGTGGCGGCGGCGGGGGGGATCCGGATCATGCCGCCGGAGGGCCGCACCTACTTCCACCACCCCACCGGCCGCCTCTCCGACGGCCGCGTCATCATCGACTTCATCTGTGAGTTCAATCAATCTCTCCATTAATTAATCATTTCGCCTCTTGTTGGTTGCTGCCATTTAGCCATAAACCCAGTCCTTAATCGCGTACAAAATCATTTGATTTGGAAGCTTCTTAAGCCGTATGATTAGTTGATTACTGTAGAATTTGAACTACTCCGTGTGAAATTTCCACGAATTTCACCCCTCCAAGCGACCCATTTCTCTAGAAATTATACTGTTTCATCTGAAATTCGTTGACCATTCGAGTAACTATCTTGCTATAATCTGGGTTGGTAGAGCAAAATCTAGCAAATCAGCAAGCTGTGAGATGAGTGATTCCGAATAATTTGGTCGCCGCCGACGTGGAACTGGAGGAGGGGATTAAAAAATGGGGAGAGTTTGGTGGCCGAAGCAGTAGCAGCATGTGCCTAACAATTTCCGCATTTTTCTCCTTTGCCAATTGGGACAGAGGAAACCTATGATCTGTATCTTTGACTTGCTCCTCTCTGTGACCGGGTTGGATGGATATGTCTGGGTTGTTGATGTGAACTGCTCGACTTAAGAAGTAGTATTAGTTCTCCCTATCTGTCACCTGTGTCTGCAAATTGCAACCCAGGTCCTTGAGGAGACTGATTCTTGCACTTTCTTGTACTTAGATCTAACCCAAGTTAGATTACTGATCCAAATGGTCATTGGATGGAAGCTCAGATGGGCACTCCAATCACTTGATTGACTGAAATGATAGTTGGTTGTTTTTTGGATTCCTGTTTTGCTCTTACCTTGTGTGACTGTAACGTGCTAGCTGCTGGGTCAACACTAGGAAATTGTCATTAACGATGTGATCAGTGCACGACATGGGTGGTTAGAGAGTTGAACCTACCAGACACATGGTTATATTTTCCAATTTATGTTCTTATAGTTGCCCGTGAATGATGTCAGGGTGCAGAGAGTCGTCCTATTACATACATCTTAGTTACTGGGTCAAAACTTTTTCCTATTTAGAATGGATTTTGGATGGATAATTCCACAAGATTTTAGGCTTAGGAGAATAAATCCACAAGTTCATCCACTTTTTTCTTCTATTGCCTCTGATCTGATGTGCTGTGAACAAATCAATTTCTTATTGTTTGTGAGTACTATATGCTTAGATAATTATTCCACTCACGGAGAGTACAGAGCCCTTGATTTGTTTATCTTCAGTTCTTCATTTGAAATAAGCAATTTACATATTAGTATGGTCCAAACACATGCATGCTACCATGTGATAGTTAATGATTCTCACATAGTATCATGTATATATTATCTGTAAATCACATGGAGTAGACCCATCCATGACATGCATTTTGTTGGTGGGATAAAGAGTGTATTATCTGTGCATGCCCCTTTTCTTCTGAGAATTTGGTGGGAAATCCATTTATCATTGTTCCTGCATTAGGACAGGCAGAATCTGTACTTTCGTTATGTGGTCATGAGAGTTGCAAGCTTTAACTTCCATGGGTGACCCCAAGTACAGACATAGAAGATATCACATATATGCATATGTATGATTGAGATGTGCACATGGTAGGGACACATGAGCAATATCTTTGGATGAGGCCCATATTACTCTTAGCAGCCCTTGGTTATAAGTAACCTTTCGTTATGTTTGGGCCAAGATTTAATTACCTAGCTGTCCAGAAGCCTGACAACATAACATTAACATATTTACATAAGTTCCAAATATTACTGGTAGACCACAAAATGATAAATGTAGTGACCATGTTTAGATAAATATAGTGACTAGTAAGGTGTGGTAGCAAATGTGAAGCTTAACACAATATGGGGATCTTGAAGGTGGTAAAACAATATCATAGAAATACTGCTACTGCTGCTGCTGCTGCTGTTGTCACAGTAATTTAATGTCCCTTTAAATCTACCCGGTCGCTGATGATGATGTTTTCAGGTGAGAGCTTGAATACACGTGAACTGAACCCATACCTGAAGTCAATTGGTTCAGACTACAGCAATGGTGTCAACTTCGCTATGGCTGGCTCAACAGTATCACACGGCGTCTCTCCCTATTCCTTGAATGTCCAAGTCGACCAGTTTGTGTACTTCAAGCACAGATCCCTGGAGCTCTTCGAACGAGGTTTGCTTTGCTGCTTGCTGCTTGAATAAGTTTGTGCTGTTACATTTACAATTGCGAGAAAAAAGAAGACAGTTTAAACCTGAAAAAAATATAGAAGACAGTAGCTGAAAATTGGAAATATTGATGATAAAACATCATGCATTTATTTGCAGGGCAGAAAGGGCCAGTGAGCAAGGAGGGCTTCGAGAACGCTCTATACATGATGGACATCGGCCACAACGATGTGGCTGGTGTGATGCACACTCCATCTGATAACTGGGACAAAAAATTCAGCAAGATCGTCAGTGAGATCAAAGACGCGATTCGGGTAAATTACACACTACAATACAGCATCTGAAACTTCCGTTTGCGAGTGTAGTAGTAACTCTTAAGCAGTTACACTGACAGAAGCTTTGGTTGTTTCCAACATCCACAGATTCTGTACGACAACGGCGCGAGGAAGTTCTGGATACATGGCACCGGCGCCCTTGGCTGCCTACCTGCACTGGTGGTGCAGGAGAAGGGTGAGCACGACGCCCATGGCTGCCTGGCGAATTACAACAAGGCTGCACGGCAGTTCAACAAGAAGCTGAGCCACCTCTGCGACGAAATGCGGTTGCAGCTGAAGAACGCCACCGTCGTGTACACCGACATGTTTGCCATCAAGTACGACTTCGTCGCCAACCACACCAAATATGGTATGACTCTCCCATCTTTAAAAGTTCAGAACATTTGGATAATTGTGTTCACATTCATGAATAACTTTATGGTAGTTTCATATATTGCATCTGAATTCGCTCACATTCTTGTGTGTTCAGGGATCAAGTGGCCGTTGATGGTGTGCTGCGGCAACGGTGGGCCTCCATACAACTTCAAGCCAGGGAAATTTGGCTGCGATGATCTCTGCGAGCCAGGATCAAAGGTGCTAAGCTGGGATGGTGTGCACTTCACTGATTTTGGCAGTGGCCTCGCGGCTAAGCTCGCGATGAGTGGTGAGTACTCCAAGCCCAAAGTGAAGCTGGCAAGCTTGGTCAATGCTGGCTCCAATAAATCATCCGATTCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018770