BGIOSGA018788

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Revision as of 02:40, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018788| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018788, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA018788

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018788, complete gene.

LocusTag

OSJNBA0072C16.3

Ensembl Transcript ID

BGIOSGA018788-TA

Ensembl Protein ID

BGIOSGA018788-PA

Length

4017

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:3232941..3236957

Sequence Coding Region

3236076..3236957,3232941..3235985

Genome Context

<gbrowseImage1> name=IndicaChromosome05:3232941..3236957 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:3232941..3236957 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCTCCACCACCGACGCCGACGCCGCTCCGGTCGCCCCCGTGCTCGAGGAGAAGCCCCCCACCCCGCCGCCTGACGGCGACGAGGTCCCTTCTGCTCCTGCGGCGGCGGCGGCGGCGGCGGAGCAACCCAAGGTAGTCGAGGAGGAGGAGGTGAGATTGCAGGGGAAAGGTGGGGGGTTCGGTGGCCAGGAGGTGGAGGTGGCCGGAGACGGGGAAGATGGCGGCGAGGTGGAGGTGGCGGAGGCTAAGGATGAGGGAGGCGGCGGGGAGTTCGCCGGGGGAGATGCGAAAGCTGCCTCCTCGTTGTTGGCGGCGGCGGCGGCGGAGGAGGAGGAGGAGGAGGAGGCGAGCAACGGCGAATTGGGTGAGGAGGATGCTTATCCGGCTTCCTCCGATGCCGCGGTAGGTGAGGAGAAGGGCGAATTGGGCGAGGAGCCGGAGGAGAAGGCTCCGGCTCTGGCTCCGGAGGCGAATGGCGCCGCCGAATCGGATGTGGAGGAGAAGCCAGAGGAGGATAACGAGGGGGAGGAGGTGGCTACTGGGGGTGGGGATGATGGTGAATTGGGAATGGAGAAAGAGGTTGATGTTTCTGCTGGGGCCGCGGAGGCGCCGCAGCCGGAGGATAAGGTAGCTCCTGAAGCTGAAGCTAATGGAGATTTGGGCGACAAGGCGGAGGAGGAAGCGAGTGCTTCGGCGGCGGTGGAGGTGGTGGAGGAGAGCAATGCTCCAGAAGAATTGTTGGAGAAGGCTGTGGTTTCGGAGGCAAATGGCGTGGCTGCCGCCGTCGAATTGGCTGTGGAGGAGAAGCTAGAGGATAACAAGGGAGAGGAGGAAGAAATGGAGGCGAAGCCTGAGCCAGTAAGCGGGGTGATTCCAGTGGTTGTTGACGACACTAGCTCCGAGACGATTGCGCCTGTGAGTGCCGAAAGTGCAGTTGAAGAGAGTACTGAGAAGGAGCAAACTGTTGACGACACTAGCTCCGAGATGATTGCGCATGTGAGTGCCGAAAGTGCAGTTGAAGAGAGTACTGAGAAGGAGCAAACTGTTGAAAGCGAGGCCAGTGAATCTGTGGAGATTGTTGGTGTTGAGAAGCCTAGTGAGGATGAGAGTAATGTTGATGGCGGTGCTAGTTCTGTTGTGTCTCAAGAATTGGCTCCAGAGGAAACCAAGGAAAATAATGTTGGTCAGGAGGATGAAGGTGTTGCTGAGGTTATTGACCGTGAAGAAGACGCTGATGATGATGAAGAGATAGTTTTAGCTGCAGCTGATGATGAAGATGATGGTACTAACGAGGCTGATGACGATGAAGATGGAGTGAGCTCTGACAGGGGGCCTGCACGAGTTGCTATTATAGAGAGTTCGGAAGCTGCGAAGCAGATCATGAAGGAGCTTGGGGAAGGTTCTGCTAGTGTTAGTCCTGTATCTGGCTTGAGCAGCTCGAGAGAGTACACTAATAGCATGGATGGGCAGATTGTCCTTGATGATTCTGAGGAGGATGGGGATGATGACGATAATGAAGATGACGATGAGAAGGGGTTTGATTCTGCTGCCTTGGCTGCCCTGCTGAAAGCAGCAACTGGTGCATCTGCAGACGGGAATGTCACAGTTTCTTCCCAAGATGGCTCTAGAATCTTCTCCATGGATCGGCCAGCTGGCCTGGGCTCATCAGCCCCATCTCTCAGGCCAACAGCCCCACGCCCAGTTGCACGGTCAAACCTATTCAGCCCCTCTGAGCTAGCAGTGACTGCTGAGCCTACTGAGGAGATGACGGAGGAAGAGAAGAAGCTGCATGACAAGGTTGAGTTGATCCGAGTAAAGTTTCTGCGCCTTGTCTATAGATTGGGGGCTACTCCTGAAGAAACAGTTGCAGCACAGGTGTTGTACCGTCTGAGCCTTGCTGAGGGTATTCGACACGGAAGGCAGACAAACCGAGCTTTCAGCCTTGACAATGCACGGAAGAAGGCCATGCTGCTTGAAGCGGAGGGAAAAGAGGAGTTGAACTTCTCATGCAACATACTTGTTTTGGGGAAGATAGGGGTCGGAAAAAGTGCAACTATAAATTCAATTTTTGGTGAAGAGAAGTCCAAAACTGATGCTTTCAGTTCAGCCACCAACAGTGTACGGGAGATTGTTGGTAATGTCGATGGTGTCCAGATACGGATCATTGATACTCCAGGCCTTCGACCCAATGTGATGGACCAAGGATCCAACAGAAAAATCCTCGCTTCTGTCAAGAAATATACCAAGAGATGCCCCCCAGATATTGTTCTGTATGTGGACCGCCTGGATAGTCTGAGCCGTGATCTCAATGATTTGCCTCTTCTAAAGACCATTACTTCTGTTCTGGGCTCATCTATATGGTTCAACGCCATTGTTGCTCTCACTCATGCTGCTTCCGCCCCTCCTGAAGGTCTAAATGGTGCCCCTATGACATATGAGGTGCTAATGGCTCAGAGGTCTCACATTATCCAGCAATCCATCAGGCAAGCTGCAGGAGATATGCGGTTGATGAATCCAGTAGCTCTTGTTGAGAACCATCCTTCTTGCAGGAGAAACCGCGAGGGTCAGAAAGTACTTCCAAATGGCCAGAGCTGGAGGCATCAGATGCTGCTTTTGTGCTACTCTTCAAAGATATTGTCTGAAGCAAACTCACTTCTGAAACTTCAGGATCCAAATCCTGGAAAGCTTTTTGGGTTCCGTTTCCGCTCTCCGCCTCTGCCCTTCCTGCTCTCCTCCCTGTTGCAGTCAAGAGCTCACCCGAAGCTTTCACCAGATCAGGGTGGCAATGAAGGAGATTCTGACATCGATTTGGATGATTACTCTGATATAGAGCAGGATGAAGATGAAGAGGAATATGACCAGCTTCCTCCCTTCAAGCCATTGACCAAATCTCAGCTTGCGAGGCTGACAAAGGAGCAGAAGAATGCTTATTTTGATGAGTACGACTACAGGGTCAAGCTTCTCCAGAAGAAACAGTGGAAGGATGAGATCCGCAGGTTGAAGGAGATGAAGAAGAGAGGTAAAACTGATATGGATGCTTATGGGTATGCTAACATCGCAGGAGAAAATGATCTGGATCCTCCTCCAGAGAACGTATCAGTTCCCTTACCTGATATGGTGCTGCCCCCTTCATTTGACTGTGACAATCCCACATACCGGTACCGCTTTCTGGAGCCAACTTCGACTGTTCTTGCAAGGCCTGTGTTAGATGCACACGGGTGGGATCATGACTGTGGTTATGACGGAGTAAGTGTTGAGGAGACGCTTGCTCTCCTTAACAAGTTTCCAGCTAATATGGCGGTTCAGGTCACCAAGGACAAGAAGGAATTTAGCATCCATTTGGACTCTTCCATCTCAGCAAAGCTTGGGGAGGATGCATCGTCGCTTGCTGGTTTTGATATCCAGACTGTTGGGCGGCAGCTTGCGTACATTCTCCGTGGTGAAACCAAGTTCAAGAATATCAAGAAGAACAAGACTACTGGAGGATTTTCAGTGACTTTCTTGGGCGACATTGTGGCGACTGGGCTGAAGGTTGAGGACCAGCTCTCTCTTGGGAAGAGGTTGGCACTGGTGGCGAGCACAGGTGCAATGCGAGCTCAAGGCGACACCGCTTATGGAGCTAACTTGGAGGCACGCCTGAAAGACAAAGATTATCCGATTGGCCAGTCCCTGTCAACCCTGGGTCTTTCTTTGATGAAGTGGCGCCGAGACCTTGCTCTCGGTGCGAATTTGCAGTCCCAGTTCTCGATTGGAAGGGGCTCGAAGATGGCGGTTCGTCTTGGATTGAATAACAAGCTAAGTGGCCAGATCACTGTCAGGACAAGCACCTCGGAGCAGGTCCAGATCGCGCTGTTGGGTCTTATCCCAGTTGCAGCCTCCATTTACAGGAGCTTCAGGCCCAGCGAACCCTCCTTCGCCTATTAG</cdnaseq>

Protein Sequence

<aaseq>MASTTDADAAPVAPVLEEKPPTPPPDGDEVPSAPAAAAAAAEQPKVVEEEEVRLQGKGGGFGGQEVEVAGDGEDGGEVEVAEAKDEGGGGEFAGGDAKAASSLLAAAAAEEEEEEEASNGELGEEDAYPASSDAAVGEEKGELGEEPEEKAPALAPEANGAAESDVEEKPEEDNEGEEVATGGGDDGELGMEKEVDVSAGAAEAPQPEDKVAPEAEANGDLGDKAEEEASASAAVEVVEESNAPEELLEKAVVSEANGVAAAVELAVEEKLEDNKGEEEEMEAKPEPVSGVIPVVVDDTSSETIAPVSAESAVEESTEKEQTVDDTSSEMIAHVSAESAVEESTEKEQTVESEASESVEIVGVEKPSEDESNVDGGASSVVSQELAPEETKENNVGQEDEGVAEVIDREEDADDDEEIVLAAADDEDDGTNEADDDEDGVSSDRGPARVAIIESSEAAKQIMKELGEGSASVSPVSGLSSSREYTNSMDGQIVLDDSEEDGDDDDNEDDDEKGFDSAALAALLKAATGASADGNVTVSSQDGSRIFSMDRPAGLGSSAPSLRPTAPRPVARSNLFSPSELAVTAEPTEEMTEEEKKLHDKVELIRVKFLRLVYRLGATPEETVAAQVLYRLSLAEGIRHGRQTNRAFSLDNARKKAMLLEAEGKEELNFSCNILVLGKIGVGKSATINSIFGEEKSKTDAFSSATNSVREIVGNVDGVQIRIIDTPGLRPNVMDQGSNRKILASVKKYTKRCPPDIVLYVDRLDSLSRDLNDLPLLKTITSVLGSSIWFNAIVALTHAASAPPEGLNGAPMTYEVLMAQRSHIIQQSIRQAAGDMRLMNPVALVENHPSCRRNREGQKVLPNGQSWRHQMLLLCYSSKILSEANSLLKLQDPNPGKLFGFRFRSPPLPFLLSSLLQSRAHPKLSPDQGGNEGDSDIDLDDYSDIEQDEDEEEYDQLPPFKPLTKSQLARLTKEQKNAYFDEYDYRVKLLQKKQWKDEIRRLKEMKKRGKTDMDAYGYANIAGENDLDPPPENVSVPLPDMVLPPSFDCDNPTYRYRFLEPTSTVLARPVLDAHGWDHDCGYDGVSVEETLALLNKFPANMAVQVTKDKKEFSIHLDSSISAKLGEDASSLAGFDIQTVGRQLAYILRGETKFKNIKKNKTTGGFSVTFLGDIVATGLKVEDQLSLGKRLALVASTGAMRAQGDTAYGANLEARLKDKDYPIGQSLSTLGLSLMKWRRDLALGANLQSQFSIGRGSKMAVRLGLNNKLSGQITVRTSTSEQVQIALLGLIPVAASIYRSFRPSEPSFAY</aaseq>

Gene Sequence

<dnaseqindica>1..882#973..4017#ATGGCCTCCACCACCGACGCCGACGCCGCTCCGGTCGCCCCCGTGCTCGAGGAGAAGCCCCCCACCCCGCCGCCTGACGGCGACGAGGTCCCTTCTGCTCCTGCGGCGGCGGCGGCGGCGGCGGAGCAACCCAAGGTAGTCGAGGAGGAGGAGGTGAGATTGCAGGGGAAAGGTGGGGGGTTCGGTGGCCAGGAGGTGGAGGTGGCCGGAGACGGGGAAGATGGCGGCGAGGTGGAGGTGGCGGAGGCTAAGGATGAGGGAGGCGGCGGGGAGTTCGCCGGGGGAGATGCGAAAGCTGCCTCCTCGTTGTTGGCGGCGGCGGCGGCGGAGGAGGAGGAGGAGGAGGAGGCGAGCAACGGCGAATTGGGTGAGGAGGATGCTTATCCGGCTTCCTCCGATGCCGCGGTAGGTGAGGAGAAGGGCGAATTGGGCGAGGAGCCGGAGGAGAAGGCTCCGGCTCTGGCTCCGGAGGCGAATGGCGCCGCCGAATCGGATGTGGAGGAGAAGCCAGAGGAGGATAACGAGGGGGAGGAGGTGGCTACTGGGGGTGGGGATGATGGTGAATTGGGAATGGAGAAAGAGGTTGATGTTTCTGCTGGGGCCGCGGAGGCGCCGCAGCCGGAGGATAAGGTAGCTCCTGAAGCTGAAGCTAATGGAGATTTGGGCGACAAGGCGGAGGAGGAAGCGAGTGCTTCGGCGGCGGTGGAGGTGGTGGAGGAGAGCAATGCTCCAGAAGAATTGTTGGAGAAGGCTGTGGTTTCGGAGGCAAATGGCGTGGCTGCCGCCGTCGAATTGGCTGTGGAGGAGAAGCTAGAGGATAACAAGGGAGAGGAGGAAGAAATGGAGGCGAAGCCTGAGCCAGTAAGCGGGGTGATTCCAGTGGTAATTGATCTTGCTCAGTGTAGTTTTTTTTGTTTCTAAATAGTTTTGATACATACAAGGATGTTGAATTATTCGTATGACCGAATCCAGGTTGTTGACGACACTAGCTCCGAGACGATTGCGCCTGTGAGTGCCGAAAGTGCAGTTGAAGAGAGTACTGAGAAGGAGCAAACTGTTGACGACACTAGCTCCGAGATGATTGCGCATGTGAGTGCCGAAAGTGCAGTTGAAGAGAGTACTGAGAAGGAGCAAACTGTTGAAAGCGAGGCCAGTGAATCTGTGGAGATTGTTGGTGTTGAGAAGCCTAGTGAGGATGAGAGTAATGTTGATGGCGGTGCTAGTTCTGTTGTGTCTCAAGAATTGGCTCCAGAGGAAACCAAGGAAAATAATGTTGGTCAGGAGGATGAAGGTGTTGCTGAGGTTATTGACCGTGAAGAAGACGCTGATGATGATGAAGAGATAGTTTTAGCTGCAGCTGATGATGAAGATGATGGTACTAACGAGGCTGATGACGATGAAGATGGAGTGAGCTCTGACAGGGGGCCTGCACGAGTTGCTATTATAGAGAGTTCGGAAGCTGCGAAGCAGATCATGAAGGAGCTTGGGGAAGGTTCTGCTAGTGTTAGTCCTGTATCTGGCTTGAGCAGCTCGAGAGAGTACACTAATAGCATGGATGGGCAGATTGTCCTTGATGATTCTGAGGAGGATGGGGATGATGACGATAATGAAGATGACGATGAGAAGGGGTTTGATTCTGCTGCCTTGGCTGCCCTGCTGAAAGCAGCAACTGGTGCATCTGCAGACGGGAATGTCACAGTTTCTTCCCAAGATGGCTCTAGAATCTTCTCCATGGATCGGCCAGCTGGCCTGGGCTCATCAGCCCCATCTCTCAGGCCAACAGCCCCACGCCCAGTTGCACGGTCAAACCTATTCAGCCCCTCTGAGCTAGCAGTGACTGCTGAGCCTACTGAGGAGATGACGGAGGAAGAGAAGAAGCTGCATGACAAGGTTGAGTTGATCCGAGTAAAGTTTCTGCGCCTTGTCTATAGATTGGGGGCTACTCCTGAAGAAACAGTTGCAGCACAGGTGTTGTACCGTCTGAGCCTTGCTGAGGGTATTCGACACGGAAGGCAGACAAACCGAGCTTTCAGCCTTGACAATGCACGGAAGAAGGCCATGCTGCTTGAAGCGGAGGGAAAAGAGGAGTTGAACTTCTCATGCAACATACTTGTTTTGGGGAAGATAGGGGTCGGAAAAAGTGCAACTATAAATTCAATTTTTGGTGAAGAGAAGTCCAAAACTGATGCTTTCAGTTCAGCCACCAACAGTGTACGGGAGATTGTTGGTAATGTCGATGGTGTCCAGATACGGATCATTGATACTCCAGGCCTTCGACCCAATGTGATGGACCAAGGATCCAACAGAAAAATCCTCGCTTCTGTCAAGAAATATACCAAGAGATGCCCCCCAGATATTGTTCTGTATGTGGACCGCCTGGATAGTCTGAGCCGTGATCTCAATGATTTGCCTCTTCTAAAGACCATTACTTCTGTTCTGGGCTCATCTATATGGTTCAACGCCATTGTTGCTCTCACTCATGCTGCTTCCGCCCCTCCTGAAGGTCTAAATGGTGCCCCTATGACATATGAGGTGCTAATGGCTCAGAGGTCTCACATTATCCAGCAATCCATCAGGCAAGCTGCAGGAGATATGCGGTTGATGAATCCAGTAGCTCTTGTTGAGAACCATCCTTCTTGCAGGAGAAACCGCGAGGGTCAGAAAGTACTTCCAAATGGCCAGAGCTGGAGGCATCAGATGCTGCTTTTGTGCTACTCTTCAAAGATATTGTCTGAAGCAAACTCACTTCTGAAACTTCAGGATCCAAATCCTGGAAAGCTTTTTGGGTTCCGTTTCCGCTCTCCGCCTCTGCCCTTCCTGCTCTCCTCCCTGTTGCAGTCAAGAGCTCACCCGAAGCTTTCACCAGATCAGGGTGGCAATGAAGGAGATTCTGACATCGATTTGGATGATTACTCTGATATAGAGCAGGATGAAGATGAAGAGGAATATGACCAGCTTCCTCCCTTCAAGCCATTGACCAAATCTCAGCTTGCGAGGCTGACAAAGGAGCAGAAGAATGCTTATTTTGATGAGTACGACTACAGGGTCAAGCTTCTCCAGAAGAAACAGTGGAAGGATGAGATCCGCAGGTTGAAGGAGATGAAGAAGAGAGGTAAAACTGATATGGATGCTTATGGGTATGCTAACATCGCAGGAGAAAATGATCTGGATCCTCCTCCAGAGAACGTATCAGTTCCCTTACCTGATATGGTGCTGCCCCCTTCATTTGACTGTGACAATCCCACATACCGGTACCGCTTTCTGGAGCCAACTTCGACTGTTCTTGCAAGGCCTGTGTTAGATGCACACGGGTGGGATCATGACTGTGGTTATGACGGAGTAAGTGTTGAGGAGACGCTTGCTCTCCTTAACAAGTTTCCAGCTAATATGGCGGTTCAGGTCACCAAGGACAAGAAGGAATTTAGCATCCATTTGGACTCTTCCATCTCAGCAAAGCTTGGGGAGGATGCATCGTCGCTTGCTGGTTTTGATATCCAGACTGTTGGGCGGCAGCTTGCGTACATTCTCCGTGGTGAAACCAAGTTCAAGAATATCAAGAAGAACAAGACTACTGGAGGATTTTCAGTGACTTTCTTGGGCGACATTGTGGCGACTGGGCTGAAGGTTGAGGACCAGCTCTCTCTTGGGAAGAGGTTGGCACTGGTGGCGAGCACAGGTGCAATGCGAGCTCAAGGCGACACCGCTTATGGAGCTAACTTGGAGGCACGCCTGAAAGACAAAGATTATCCGATTGGCCAGTCCCTGTCAACCCTGGGTCTTTCTTTGATGAAGTGGCGCCGAGACCTTGCTCTCGGTGCGAATTTGCAGTCCCAGTTCTCGATTGGAAGGGGCTCGAAGATGGCGGTTCGTCTTGGATTGAATAACAAGCTAAGTGGCCAGATCACTGTCAGGACAAGCACCTCGGAGCAGGTCCAGATCGCGCTGTTGGGTCTTATCCCAGTTGCAGCCTCCATTTACAGGAGCTTCAGGCCCAGCGAACCCTCCTTCGCCTATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018788