BGIOSGA018801

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Revision as of 02:41, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018801| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018801, complete gene.| tag = OsI_184...")
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Gene Name

BGIOSGA018801

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018801, complete gene.

LocusTag

OsI_18459

Ensembl Transcript ID

BGIOSGA018801-TA

Ensembl Protein ID

BGIOSGA018801-PA

Length

5338

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:3015263..3020600

Sequence Coding Region

3020427..3020600,3020208..3020326),complement(3018895..3018950,3018686..3018745),complement(3018512..3018558
,3018235..3018429),complement(3018063..3018109,3017904..3017970),complement(3017108..3017208
,3016338..3016476),complement(3016173..3016235,3015982..3016065),complement(3015263..3015601

Genome Context

<gbrowseImage1> name=IndicaChromosome05:3015263..3020600 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:3015263..3020600 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGCTGGATTTGGGAGCTCTCGTTCTCAAATCCGGCGGGCTGTCGGTGTCGGACTACGACTCGATCGTCGCGATCAACATCTTCGTGGCGCTGCTGTGCAGCTGCATTGTGATCGGGCACCTGCTGGAAGGGAACCGGTGGGTCAATGAATCGATCACCGCGCTTGTCATGGGGCTGATCACTGGAGGTGTGATTCTGCTCGTCAGTGGTGGGAAGAACTCGCACATTCTTGTGTTCAGTGAGGACCTCTTCTTCATTTATTTGCTTCCACCGATCATCTTTAATGCTGGTACGAAGAAGCCAGCTGGACAGTTTTTTTCAGTTGTGGAGCTGGATGTAAAAGTATGTGCCATGACATTGTTCAAAAAACTTGATGTTGGTCCACTCCAGCTTGGGGACTATCTTGCAATTGGGGCTATCTTCTCAGCAACAGATTCTGTTTGCACCTTACAGGTGCTTAACCAAGACGAAACACCCCTACTCTATAGTCTGGTTTTTGGTGAAGGGGTTGTCAATGATGCTACATCTGTTGTGCTCTTTAATGCAATTGAAGACATTGATATTGCTAATTTTGATAGCCTTGTTCTACTAGCGTTCATAGGAAATTTTCTCTACCTATTCTTCACCAGTACCCTTCTTGGAGTAGTTGCTGGGTTGCTTAGTGCCTATATTATTAAGAAACTATGTTTTGCCAGACACTCAACTGACAGAGAAGTTGCTATCATGATACTCATGGCGTACCTTTCATATATGCTGTCGATGGCACACTTTGCTACTTTATCTTTCATTGCTGAAATTTTTCTATTTCTCTATGTTGGGATGGATGCACTGGACATTGAAAAATGGAAATTAGCTAGCAGCAGTCCTAAAAAACCAATTGCTTTAAGTGCAACTATATTGGGCTTGGTTATGGTTGGAAGAGCAGCATTTGTATTCCCTTTGTCTTTCTTATCCAATCTAAGTAAAAAAGAGACACGCCCAAAGATCTCCTTCAAGCAGCAAGTAATCATATGGTGGGCAGGTCTCATGAGAGGAGCAGTATCAATAGCACTTGCCTATCACAAGTTCACCGCATCTGGTCATACTGAATTGCGAATCAATGCTATCATGATCACCAGCACAGTCATTGTTGTTCTGTTCAGCACAATGGTTTTTGGTTTTTTTACCAAGCCTCTCCTCAATCTCCTCATCCCACCAAGGCCTGACATAGCAGCTGATCTCTCAAGCCAGTCAATCATAGACCCACTTCTTGGAAGCCTGCTGGGGTCTGACTTCGATGTAGGCCAGCCCTCCCCTCAGAACAACCTTCAGCTTCTTCTCACCATTCAGACTCGCTCCGTTCATCGCGTGTGGCGCAAGTTTGATGATAGATTCATGCGCCCGATGTTCGGGGGCCGAGGCTTCGTTCCTTTCGTGCCTGGTTCGCCAGTGGAGCGGAGCATCCATGGATCTCAACTGGGCACTGTGACTGAGGCTGAACATAGCTGA</cdnaseq>

Protein Sequence

<aaseq>MGLDLGALVLKSGGLSVSDYDSIVAINIFVALLCSCIVIGHLLEGNRWVNESITALVMGLITGGVILLVSGGKNSHILVFSEDLFFIYLLPPIIFNAGTKKPAGQFFSVVELDVKVCAMTLFKKLDVGPLQLGDYLAIGAIFSATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIEDIDIANFDSLVLLAFIGNFLYLFFTSTLLGVVAGLLSAYIIKKLCFARHSTDREVAIMILMAYLSYMLSMAHFATLSFIAEIFLFLYVGMDALDIEKWKLASSSPKKPIALSATILGLVMVGRAAFVFPLSFLSNLSKKETRPKISFKQQVIIWWAGLMRGAVSIALAYHKFTASGHTELRINAIMITSTVIVVLFSTMVFGFFTKPLLNLLIPPRPDIAADLSSQSIIDPLLGSLLGSDFDVGQPSPQNNLQLLLTIQTRSVHRVWRKFDDRFMRPMFGGRGFVPFVPGSPVERSIHGSQLGTVTEAEHS</aaseq>

Gene Sequence

<dnaseqindica>1..174#275..393#1651..1706#1856..1915#2043..2089#2172..2366#2492..2538#2631..2697#3393..3493#4125..4263#4366..4428#4536..4619#5000..5338#ATGGGGCTGGATTTGGGAGCTCTCGTTCTCAAATCCGGCGGGCTGTCGGTGTCGGACTACGACTCGATCGTCGCGATCAACATCTTCGTGGCGCTGCTGTGCAGCTGCATTGTGATCGGGCACCTGCTGGAAGGGAACCGGTGGGTCAATGAATCGATCACCGCGCTTGTCATGGTGAGATGAGAGGGCTCTCTGGCCTTGCACCCCAGGTGTTTGTGGTTTTGCCTTACAGGGGAGTGGTTTTGAGTTTTGTTCTGTGGGTTGGCGCTTGCAGGGGCTGATCACTGGAGGTGTGATTCTGCTCGTCAGTGGTGGGAAGAACTCGCACATTCTTGTGTTCAGTGAGGACCTCTTCTTCATTTATTTGCTTCCACCGATCATCTTTAATGCTGGGTGAGCTTTCTGTGTACCTATAGCTCTTCTAGTGAGCTCCCAACCAAAGCGGAATTTATTTTGTTGTTCTTCTGTACAAGAAAAGAAGGTGCCCTGTCTTAGTTTAATTTGGTTTTGGCTAATTTAATCTTGAGAGCAAAATGCACCACAATAGGACTCACTTGAGAAATTCATGTATTTCTGAAGTATGCATATGATGATATTATTATTGCCATTCTGTATAAAATATTACTTAGATTCCTCTGGATGTATCAAACCCATGTTTCTAAGACTTCCTCAAAACCTATGTGATTTGTGAATGCTAAGGTACACTTATTGAGCTGGATGTATAAAATAGTCAACTGCCCACCCATTCCCATGAAATTATACTGAAAAATGAATTAAACTATCACGTCTGTCCCAAACAATTATTTCCCCCCCTGAAATACAGACTTAAAAAGGATTGTATCACAGTAGTACATGAAGCCCTTTTACAATTAGAGGACTTGGTGATGATTGGATCCAAGTATGTCTAATCATTCTTACATTCTTACTGAACGTGAGTAAGCTTGTGAGTCATTTAGATTATTTTTCCTGACTGTGCAAGTATATATATAGTCTTTATAGAGAATCAGCATCCTTACTCTGCCCTGTTTCGAACCTAGGAAATTGCATGCATTCCTGCAGTAACTGAATTGATTAATATGAATTTCCTGTGTATTTCTTTGGATTAGCTAATAACATTATAAGCTCCAGCATTATATTTTTGTGCAGAAATACATGTATTTTCAGTTCTCGCTAAAACATTTGACCCTAACATCAAAGTGATAGCCTGAAGTTACTTACATTTTATATAAGTGAAGCTTTTAACTGAAATGCATCTTTGTTTATAATCATCAGGTTTCAAGTAAAGAAAAAACAATTCTTCCGCAATTTTATGACAATTATTTTATTTGGTGCTGTGGGGACATTGATATCCTTTGTGATAATCTCTCTAGGTAAGTTGCTGAATTCTTTGCTCAGCTTACATCATCTTATTTTGGTTCCATATTAATGATCACAAGATAACCAACTATATGAACACCTACACCAAAATACAAAATCTTGGTGTTTAACACCTGAAACCAAATATCATCATTTCAACTTTCAAGTATGTGTGACTGATTTCTTTGAGATTAAGATAAATTAAACACTGGTTTAAGAGAGTAAAAGAATCAGTAATGAGCCAATCGCTTCTATATGAAGTGGCTACATGATGCATGAAAATCCATAATTCAGTACGAAGAAGCCAGCTGGACAGTTTTTTTCAGTTGTGGAGCTGGATGTAAAAGTATGTATGTTAGATGCACGGTTGTTTGCCTTATTGTATTCATTACTCAATGGTACAAACATGATTTGTTCAAAGTCTCAAACCTTGCATCCTCAAACTTTGATATGTTGCTCTGGCCGCTAAGATTTTCCTTTTTTCTAATGGACATATCAGGTGCCATGACATTGTTCAAAAAACTTGATGTTGGTCCACTCCAGCTTGGGGACTATCTTGGTTAGATACTTTATTCTTGGCCTTTCTACACTTCAAAATTATTGAAGCGACTGGTTGGACTTTGGTACCATTGAATACATCATCATTCTGCTCGCTGTTTATCTTTTTGTTTAATCCATATATGCAGCAATTGGGGCTATCTTCTCAGCAACAGATTCTGTTTGCACCTTACAGGTTTTTCCATTTAATGACCTGTTGTTAATGTCTTGTAAAATGAAACAGCACACCATTAAATATGCAATTTTGTTACTTGCAGGTGCTTAACCAAGACGAAACACCCCTACTCTATAGTCTGGTTTTTGGTGAAGGGGTTGTCAATGATGCTACATCTGTTGTGCTCTTTAATGCAATTGAAGACATTGATATTGCTAATTTTGATAGCCTTGTTCTACTAGCGTTCATAGGAAATTTTCTCTACCTATTCTTCACCAGTACCCTTCTTGGAGTAGTTGTAAGTCTCTTTGATTTTGACAACCTCCACTGATCTTTCCTTTTCTTTTCCATTTACTACCTTCCTTTCTGATGATTCATTTGACCATGCCTTTTTGGACTAATTACTGGTACTCACTTTGGCAGGCTGGGTTGCTTAGTGCCTATATTATTAAGAAACTATGTTTTGCCAGGTCTGCTCCTATGTGATTTAGTCATGCCACAGAGTAGTTTGTTTTTTATGTAGATATGAAAATCATTGTGGCAAGCTTGTGATGTTATGCAGACACTCAACTGACAGAGAAGTTGCTATCATGATACTCATGGCGTACCTTTCATATATGCTGTCGATGGTGAGTGCCTACAAACTATAAGAACTTCAAAATAAGCAACTCTCTTAAGTCAAATTATTTCGGACATTTATCAATTACTTCCTCCGTCCCAAAATATAAGCATTTTTAGTGCTAAGTCAAATATTTTTAACTTTGACTATTAATAGCAAAAAAAAAAGATCAATCCCGTAAAATTGATGTTACTAGATTTATCATTAAACAAGCTATCATAATATACAACTCTCTTTATTTAAAACATTTTACTTTTATATAGATATTTTTGGTCAAAGTAGCATATCAAAGACTGTGTCGAAATCCAAAAATGCTTATATTTTGCGATGGAGGGAGTATCATGTTATATCCATGTAATACTAAGTGTAAATTTGTTGATGTTTTACTCTTGTACTTCTTTTGGCAGTCTGTAATTTCTTTAATCTCACTTTGCACCAGCATCTTCCAAAGTACATGATATTGATATTTTTTTTGACCCTTTCATATATATATATTTCAGCTGCTAGATCTGAGTGGCATTCTCACTGTGTTCTTCTCTGGAATAGTAATGTCACATTACACTTGGCATAATGTGACAGAAAGCTCTAGGATTACTACCAAGTATGTACTGTCTGAGAATCAGTTTTACTGGCAACCCTTGTGGTTTCTTTTAGATGAAAATATTTATGTATATGGCTTCCTGATATTCTTCATTCATTTTACAGGCACACTTTGCTACTTTATCTTTCATTGCTGAAATTTTTCTATTTCTCTATGTTGGGATGGATGCACTGGACATTGAAAAATGGAAATTAGCTAGCAGCAGGTGTGTTTTTGTCCACGACCAATTCATAAAGTTTCTTCTGATATTTTCATTATCCGATGGTTTGGTTTGCATCCACTGGTGTAGCGTGTTATTCATTGGTGGGATCCATGGCCAGAATAAAAACAAATGATCGTGTTCTTTCATCCATTCTCTCCTGTCTGCCAAAGGACCGCACCTGCTCCTTTCATATGTTGGAAACCACGAGCAAGTATCTTTTTTTCGGTTTGGTTCAAACAAAAGAACTAGTTTTGCTTTTTTGTCTGCCTCCTGGTTCAAGTCCCCGGTGGTAATGCCTTGAACAATTGCCTCTATGGTTCAATTTTTCCATCACTAGGGATGCTGTAATTTGCTTAGCTCCTTCTTAGACTGATGGTCCTGTCAGCTGACAAAAGTGTATATTCTATGTGAGGTGATATGTTGTTGATGAGAGAAAGTCGGAACCCTTCCTTTTCAGTTTGGAGAAGTCTGCAAAGAACATCTTCAAGCTTCTATGATTCTATTAATTGTTGTTTGGCATGGTGCACACTGTTAAACACAGGCTCACACAACAGCAACTACCTTGCATGTCTTGCCCATGTTTTTTTTTTCTGAACATAATAACTAATTTATATCAGTTTTCCTTATGATGCAGTCCTAAAAAACCAATTGCTTTAAGTGCAACTATATTGGGCTTGGTTATGGTTGGAAGAGCAGCATTTGTATTCCCTTTGTCTTTCTTATCCAATCTAAGTAAAAAAGAGACACGCCCAAAGATCTCCTTCAAGCAGCAAGTTAGTATTGACCTTTTTTATTCTTATGTAGTTGTATCACTTTCTTTCCCTCCTGAAAACAGAGGGAGCTAAGCAGCTAACTGTGATGGGTTTATTCTCTAGGTAATCATATGGTGGGCAGGTCTCATGAGAGGAGCAGTATCAATAGCACTTGCCTATCACAAGGTGATGTTTGATGGTTAACCTGTCTCTCTGAAAGTGATTTGGAACCACTACCACATTAATTTACTAAAACCTAGTCTGATGTGTAACGTTCTCATAAAACTTTGCAGTTCACCGCATCTGGTCATACTGAATTGCGAATCAATGCTATCATGATCACCAGCACAGTCATTGTTGTTCTGTTCAGCACAATGGTAAGGATGTAATGCTTTCTCTCTGTTATTATCTTGGATGGTTATTTTCTGCTCAGCAGGTGTATTTCTAGCAATCTGTTGATAGATTTGTGCACTTTTGTTTGTGTGTGCTATATTTGGTTCAGCCAAGTCAATAGGGGACATGTGATTATATGAGCGTAAACAAATCTAATGCAGTATTTATCATTTCTTTATATGACGCTTACAGATTAAGTGAAATACCCATGAACAATGCAGCCATACGGGGATTATCAATGTATATGATCCTGTTTAATCTAGAAAAGAAGTGATATCATACATTTCCGTTTCCATCGTGTACAAAGAAAGTAGTCCAATTATTATCACTTTGCTAATGTATACACCATCAATATTTGTTTCAGGTTTTTGGTTTTTTTACCAAGCCTCTCCTCAATCTCCTCATCCCACCAAGGCCTGACATAGCAGCTGATCTCTCAAGCCAGTCAATCATAGACCCACTTCTTGGAAGCCTGCTGGGGTCTGACTTCGATGTAGGCCAGCCCTCCCCTCAGAACAACCTTCAGCTTCTTCTCACCATTCAGACTCGCTCCGTTCATCGCGTGTGGCGCAAGTTTGATGATAGATTCATGCGCCCGATGTTCGGGGGCCGAGGCTTCGTTCCTTTCGTGCCTGGTTCGCCAGTGGAGCGGAGCATCCATGGATCTCAACTGGGCACTGTGACTGAGGCTGAACATAGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018801

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA018801&oldid=47557"