BGIOSGA018820

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Revision as of 02:41, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018820| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018820, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA018820

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018820, complete gene.

LocusTag

OSJNBB0015A05.3

Ensembl Transcript ID

BGIOSGA018820-TA

Ensembl Protein ID

BGIOSGA018820-PA

Length

5688

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:2851691..2857378

Sequence Coding Region

2857281..2857378,2856514..2856580),complement(2856366..2856439,2854875..2855013),complement(2854699..2854791
,2854150..2854215),complement(2853790..2853906,2853136..2853249),complement(2851691..2852107

Genome Context

<gbrowseImage1> name=IndicaChromosome05:2851691..2857378 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:2851691..2857378 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGTAATATGCTTTGAGGAATCTATTCATCTGTTGCTTTGCTTGATTGGTCTCAGGTACGATGGATTCTTCCTCTCCATGCTCGCCACCAGCCTAATCATTGTCTCCATCAACTGGAAGAGGTATCGTCTCTGCGCCCACCCGTTGCACATATGGATCGTGGTCGACTACACCACCGTCTTCATCTTCCGCCTTCTCATGTTCGTCGATAATGGCCTTGCCGCCGGCATGGGATTGGATCTTGGATGGCAACAGAGATATGCTCGTTTTTGTGGGAGAATTATTGTCTTGTCGGTTCTTGTGCTTCTTCTCTATCCCTTTCTTTGGGTTTGGACTGTGATAGGAACATTGTGGTTTAGCACTGCAAGAGGCTGTTTACCCGAGGAAGGACAAAAATGGGGCTTCCTTATATGGCTGCTTTTCAGCTACTGTGGTCTCGCCTGTATTGCATGTGTGGCTGTTGGAAAGTGGCTAAGCCGAAGGCATGCTCTCCAGCAGAGGGCACAACAGGGAATACCAGTCTCTGAATATGGGGTTTTGGTTGACATGATCCGTGTGCCTGATTGGGCATTTGAGGCCGTTGGCTTGGAAATGAGAGGAATGGGCCAAGATACTGCATATCATCCTGGTCTTTATTTAACAGCTGCTCAAAGAGAGGCAGTTGAGGCACTGATTCAAGAACTCCCGAAGTTCAGACTGAAAGCTGTTCCTACAGACTGCAGTGAGTGTCCAATCTGCCTTGAAGAATTCCATGTTGGCAACGAGGTCCGTGGGCTCCCGTGCGCGCACAATTTCCATGTGGAGTGCATCGACCAGTGGCTCCGGCTGAACGTCAAGTGCCCCCGTTGCCGGTGCTCCGTCTTCCCCAACCTCGACCTGAGCGCGCTCAACAACCTCCGGCCATCCTCCGAGCCGGACCGGCCGTCGGCCAGCGAGGTGACAGCGGCGACGATGGCGCGGTACGTGAGGTCGTCGCAGCCGGCTGGGCAGAGCTACCTGCTGCGGCTGCAGGGGCTTCTGCTGCGGCAGGTGGTGGTTCGGCATGGCGGCAGCGACGACATGGCGAGCGCCGGCGCTCTTCATGTGGCCGCCGCGGTGACTGCGCCGGCGACCACCGGCGGCGTGGAGAGCGAGCTGCCTAGCATAGTGGTTGATGGTGGGCATCAGCTGCCGGATCGCTGA</cdnaseq>

Protein Sequence

<aaseq>MAVICFEESIHLLLCLIGLRYDGFFLSMLATSLIIVSINWKRYRLCAHPLHIWIVVDYTTVFIFRLLMFVDNGLAAGMGLDLGWQQRYARFCGRIIVLSVLVLLLYPFLWVWTVIGTLWFSTARGCLPEEGQKWGFLIWLLFSYCGLACIACVAVGKWLSRRHALQQRAQQGIPVSEYGVLVDMIRVPDWAFEAVGLEMRGMGQDTAYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEVRGLPCAHNFHVECIDQWLRLNVKCPRCRCSVFPNLDLSALNNLRPSSEPDRPSASEVTAATMARYVRSSQPAGQSYLLRLQGLLLRQVVVRHGGSDDMASAGALHVAAAVTAPATTGGVESELPSIVVDGGHQLPDR</aaseq>

Gene Sequence

<dnaseqindica>1..98#799..865#940..1013#2366..2504#2588..2680#3164..3229#3473..3589#4130..4243#5272..5688#ATGGCTGTAATATGCTTTGAGGAATCTATTCATCTGTTGCTTTGCTTGATTGGTCTCAGGTACGATGGATTCTTCCTCTCCATGCTCGCCACCAGCCTGTATCCTTTCATCATTTCCTCAGCATGCTTTCAGTTTTTATTAGAATTTCGCTCGCCTCGCGCTCAGTTTTTGTTAGAGTCGATTACATTTTGCACGAGCTAGATTAACCTACATTTCTCTTTGCACCGGACTAGGTGCGCTACATCTTACCCAAATGGGTTGGGCGGGTGTTATGTGAATGCCAAGTGAAAGTTTGGACTAAACCTGGTGGAATTTTCTTTTTTCCTTTTTTGACATAAGAAGGTAGAGCCAGCTCTACCGTATTAACTTATAGCCATTTCGGACTCCATCGTTTCGCTTATTGATGTAATAAGCGAAACGGCATATTTGCAAACGGAAAATAATTTGCAAATAAAACTTTCATATACGTGTTCTTAGCGATCTAAAAGCAAAAGTTGAAAAATAAACTACGATGAAAAAACCCTAAAATCAACTCCAAATTTAAGGTTGAAAATTTAAATTTTTGCTTATAAGCATAAGCATAAGCCAAAAGATGAGGCTCAACAAAATGGATGGTTACAAAGTTTTACAGGAAGAAGGTACATGAAAAAGAGGAAGGGAAAGAGAGGGAGAAAAAAAAGGGGAGGGGGGGGGGATGTACAAAACCTGGTGGAAAAATGAAACAATTTACCGAGTTCAATGTGTATTTTACTGATACATTTTCGTCAATTGCTATTGTTCCTCCTCAACTTTGTCCAGAATCATTGTCTCCATCAACTGGAAGAGGTATCGTCTCTGCGCCCACCCGTTGCACATATGGATCGTGGTCAGTTCCTCAATCCAACATCTATCTCAAATCAAACCGCTATTCCTCTATCTCACTCTCTCGCCTTTTCCCAGGTCGACTACACCACCGTCTTCATCTTCCGCCTTCTCATGTTCGTCGATAATGGCCTTGCCGCCGGCATGGGATTGTAAGTTTGTAACTACTATCTCCATCTATTTCAACCTCACATCTCCTGTCACAATATATCTATGGTAGACCTACAAATAGATTGTAGGGGTAAAGACAGTGGTTGTCATTTTCCTCTGCTTTGGGTGGGCTGTTCTGTTCTGCTAGACAGAACAAATCTGTGCCATTTTGACCCCAAACTTACCACCGGGTTTAGTTCTTTTTAATTATGGACTAGTACGAAATTTGCATACAGGAAATTTTGATGTCACCCCTAAATCGAGAAAAGCAGCCCAGCAAAAAAGGAAGAAAAACAATTAACAATGACGTTTGTACCCTTTTGGGAGAAAAGGAAATTCCTGTAATAGGCAACCTGACCAATTTTTGTCTTGACCATCTTGATTGCAACCTCAGCCTCCGCTCTTTTTAAACGAGCAAATTATAATTAAAATACGATTATGAAGGGACATAAGGCTAAACAGCCCTCTTTGCATGGTTATTACCTGAGTAGATGAGATATAACCTTTTAACCGTCTGCTAATTTGGATGAGTTCATGGCGCAAAACAATATAGTTTGTAGTTTCACATTTCAGAAGATAGAAGTCTCAATTTATTTTTATTTAGCCATTACTGTATTATTTTCTTCTGTGCAACTTACTGTCTTATTTTGAAGATTTGCCGTAATATGCCATTGAAATATTTCATATTCAATTTTTTGTAGTATTACCATTTTAACGTGTAACTTCAAAGTTCAAACAGAATATGCTCTTAGAATATTTTCTAAGACTACCTGTATGCCCACATGTTTGATACAGATAAAAATGAATAAAATAAGTCTGTTTGGATTTTCGGAACATATAAATGTGATTGTTGCATTGAACCTGCAAAACCTTTTTTTTTTTCTGTTACAAGAAGCACTTGACAATGTCTACACATGTCTATTTGTAAAATTTGGTCATCTTTGGCATTTCCATGTAAAATTGCGAATTTAGAACGCCAAATACAAAAAAAAAAGGGAAAAAAAGGAAGGCCGAAGTGTCATTTCAGGAATTAAGGGAGCAACTAGTAAGTAATTTAGTGGAGGTGTTGGTAGCAGATTCCCTGCCACCACACCACCTTCTTTCTAAAGGAGTACATATAACAAATTCATCATCCTGTGATAAAGAAACAGTATGCAATAGGTGTTTCTATGATAAAGCAACACTGTGCAATAGGACAGCACATAAGTATTTCCTCTTACAGTTGTAAGAGGCTTGAGTATTGTCTACAAAATAGAGTTGCTTACTTGCCAGTGTGCACCTTTGTATGTTGGTGTTTTCCTTCTAAACTTTTCCAAAGTATGACGTTTGTCTTTTTTGTGGCTGGGAATTGTAGGGATCTTGGATGGCAACAGAGATATGCTCGTTTTTGTGGGAGAATTATTGTCTTGTCGGTTCTTGTGCTTCTTCTCTATCCCTTTCTTTGGGTTTGGACTGTGATAGGAACATTGTGGTTTAGCACTGCAAGAGGCTGTGTAAGTTTTCTTATTGTGATGGTATTATGCTCATCACCAATTATATAGAATTTCTACTTAACATACACTCACTCTATCTGTAGTTACCCGAGGAAGGACAAAAATGGGGCTTCCTTATATGGCTGCTTTTCAGCTACTGTGGTCTCGCCTGTATTGCATGTGTGGCTGTTGGAAAGGTACTGCTATAAGATATATTGGTACAAACTGCAATCTTGCATTGGATCCGCATATTATCGTCCACCGGCTTTTCATCAGTCATACATACCATATCTAGATGTCATTTAGATTGAAGATGTTAAGGTTTTAGTTATTTGGCATTGATGTATTCATAATTTCATATCTTCTTTGCATCATCTAGAAATCATATCCAACTAATTTTTCTTCTTTTAAAAGCATGAAGGGTAGTGTACATCTTCCTTCGTATTGACTATTAGTGCAGAAGCCATGCTGATAGCAGAACCCTAATCCTCATGGTTGTACTGGCTTTAGATCTTTTGTTAGTCAGAATTTTGGTAGTTTTCTTGTAATTTTATTTTTGCCTTCTTATTTTAATAAAGCTATAACTGTGGGGGCTCCCGCTACAGTGTTTTTTGTTAAAAAAAGTATATTTAAATTCACAGAGGACATATCGCCATGTTTTAATTTAAATTTTGTTGCAGTGGCTAAGCCGAAGGCATGCTCTCCAGCAGAGGGCACAACAGGGAATACCAGTCTCTGAATATGGGGTAAAGATTCTTTTCGTTCATTTTAGCTGCTGATTTTGTCCAGTGAACTGTCAATGGCAGAAGTTTGAAAAAATATGAAACTACAGCATTGCCCATTCTTTTTTCATGCTTGCCTGTTCAATTCAGTATGTGCAACTCTTGCATTATGGCAAATCATAATTGAAGCTTACTTGTCTCAACTACTAGCTTTATATTAAGTAGGGAGGAGAGGATTTCATTTTTTTTAATTGTCATCATCTACAGGTTTTGGTTGACATGATCCGTGTGCCTGATTGGGCATTTGAGGCCGTTGGCTTGGAAATGAGAGGAATGGGCCAAGATACTGCATATCATCCTGGTCTTTATTTAACAGCTGCTCAAGTAAGTTGCTTTGCGCAATTTGATGAATCGCCTTTCGACATATTGCTAGTCTCTGTTTTGATTGATTCTGTTATTTGCTTATATTTAGGCATTTAGCTGCACATTCGATTCAAGGGGTTGTACTGTCTGCTAGTTGGTCTAATCTAGCTAGACAAAATTTTCATGTTTTTAATTGCTAGCGGTCTCACAGATGCAAAGTAGTCTCTGAAGACTTCTGGATTTGTATTAAGGAGCAAAGGTCAGTGCAAAACAGAGAGTATAAGGAATAGAGCTCAATAGAGGCAGTAGAAAAGGACAGGAAAGAAACTAGTACTAATTAGCAACCGCAATATTTTTGCCTCATCTTGCTCCTAAGCACTGGCAGATCTTTTTGTGATAATCTAACTGAGAGGGATGTTTCCTGATCAAAGGCATTTAGATTCCTTTCTTTCCAATATTGCCCAAATGCATGCATTTGGGACCATTGTTGAACACTGCAGTAATACTGGAATCCACAGTGTCATTGAGCAGATTGATTTTAAATTGGTCGTTTTTGTGCAGAGAGAGGCAGTTGAGGCACTGATTCAAGAACTCCCGAAGTTCAGACTGAAAGCTGTTCCTACAGACTGCAGTGAGTGTCCAATCTGCCTTGAAGAATTCCATGTTGGCAACGAGGTAAATTACAGACACCAAGTAGAGAACTTGATTGAACTGCAACTCTACTAGTATTTGCACATGGTGCTTCTTCATGTATTTGTATGTGGCATGAATCCATCAGGAAAAAAGTCCAGTCCATTTAACTCCCTTGAACTTATTTTGTCAGCAGTCAACTCCCTGAACTATTTTTTTTTACCCATTTTATCCCCTAAACTACATATAAAAACAGCTTATCTTGTTTCTTTGTAACGCATCTCTTTTCCGTCTTTATACAAGTCATATTTAAGCTAAAATTTGTACAACCATTGATGACAAAATAAACTACTCCCTCCGGGTTGATAATACTTGTTGTTTTGGACAAGAGTATGGTCTCCAAAAAAACAACTTTGACCATTATTTTCTATTATAATATATATAAAAGTGTTAACAAATATATGATTTTATTAAAGTACTTTTAAAGACTAAGCTATACATGTAGTCACCATATTTGAAAGACAAATATTTTAAAAATGATTAATAATCAAAGATTCTAAAGTTTGACCCCACCCTTGTCTAAAACGATACTTCCTCCGTTTCACAATGTAAGACTTTCTAGCATTGTTCGCATTCATTTAGATGTTAATGAATCTAGACATATGTATGTGTTTAGATACATTAACATCTATATGTATATGAGCAATGCTAGAAAGTCTTACATTGTGAAACGGAGGTAGTAAGTATTATTAGCCCGGAGGGAGTACGTTACAAAATACTTCTATCATGAAATTCTGTATGCAGTCTTGAATCTCTATATTTAAATTTTTTATCTTGGGTGTGTCCAACCTATGCAAATAGTGAACAAAAATTCAAAAAAAAAGTAATAATGTGTACATGCCATAATTTCAATGAAGAATATAACTTGTATAAAGAAAAAAAAAGCATGGTTAGAAGTAAAGTGGAGCATTTTTGTTAGTTCAAGGGTAAAACAAGACTAGGGATGGTTTATGAAGTTAAGTTCTCCAGCATTTTAAGGACTGACAGACTTCTTTTCCCATTCCATTATGCAGGTCCGTGGGCTCCCGTGCGCGCACAATTTCCATGTGGAGTGCATCGACCAGTGGCTCCGGCTGAACGTCAAGTGCCCCCGTTGCCGGTGCTCCGTCTTCCCCAACCTCGACCTGAGCGCGCTCAACAACCTCCGGCCATCCTCCGAGCCGGACCGGCCGTCGGCCAGCGAGGTGACAGCGGCGACGATGGCGCGGTACGTGAGGTCGTCGCAGCCGGCTGGGCAGAGCTACCTGCTGCGGCTGCAGGGGCTTCTGCTGCGGCAGGTGGTGGTTCGGCATGGCGGCAGCGACGACATGGCGAGCGCCGGCGCTCTTCATGTGGCCGCCGCGGTGACTGCGCCGGCGACCACCGGCGGCGTGGAGAGCGAGCTGCCTAGCATAGTGGTTGATGGTGGGCATCAGCTGCCGGATCGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018820

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA018820&oldid=47576"