BGIOSGA018856

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Revision as of 02:42, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018856| Description = Putative cbl-interacting protein kinase 1| Definition = Oryza sativa Indica Group BGIOSGA018856, complete gene.| tag ...")
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Gene Name

BGIOSGA018856

Description

Putative cbl-interacting protein kinase 1

Definition

Oryza sativa Indica Group BGIOSGA018856, complete gene.

LocusTag

CIPK17

Ensembl Transcript ID

BGIOSGA018856-TA

Ensembl Protein ID

BGIOSGA018856-PA

Length

3252

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:2309991..2313242

Sequence Coding Region

2313009..2313242,2312254..2312325),complement(2312025..2312132,2311804..2311884),complement(2311667..2311720
,2311464..2311589),complement(2311165..2311374,2310938..2311042),complement(2310583..2310699
,2310411..2310473),complement(2310242..2310316,2309991..2310146

Genome Context

<gbrowseImage1> name=IndicaChromosome05:2309991..2313242 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:2309991..2313242 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGAAGGAAGGGAGGGAGGCGCTGCTGGGCGGGTACGAGATGGGGAGGACGCTCGGGGAGGGCAACTTCGGCAAGGTGAAGTACGCGCGCCACCTCGCCACCGGCGGCCACTTCGCCGTCAAGATCCTCGACCGCGGCCGCGTCGTCTCCCTCCGCGCCGGCGACCAGATTCGCCGCGAGATCGCCACGCTCAAGCTCCTCAGGCACCCCCACGTCGTCCGCCTCCACGAGGTTGCTGCTAGCAAAACGAAGATTTACATGGTGCTTGAGTTTGTCAATGGAGGTGAACTGTTTCAGAGAATTGCAGTAAAGGGAAAACTATCAGAGAAAGAAGGAAGGAGGCTTTTTCAGCAGTTAATTGATGGTGTTAGCTATTGCCATGATAGGGGAGTCTACCACAGAGACCTCAAGCCTGAGAACGTTCTTGTGGACCAAAAAGGCAACATCAAGATCTCTGATTTTGGTCTTAGTGCTTTACCTCAACACCTCGGGAATGATGGATTGCTGCATACTACCTGTGGTAGCCCCAACTATATTGCTCCTGAGGTTCTGCAGAATAAAGGATATGATGGATCCTTGTCAGATATCTGGTCTTGCGGAGTAATCCTTTATGTAATGCTTATAGGATATCTTCCGTTCGATGACCGAAATATTGTTGTTCTGTATCAGAAGATTTTCAAGGGTGACACTCAGATCCCAAAGTGGCTTTCACACAGTGCACAAAATCTTCTTCGGAGGATTCTTGAACCCAATCCGATGAAGAGGATCGACATGGCAGGGATCAAATCACACGAATGGTTTCAGAAGGACTATATTCCTATTCTTCCATATGATGATGACGATGAAGATGTACAGTTTGGGGCACGTCTCCCTGCCAAAGAGCAAATCAATGATGAGCCTGGAGATAAGAATTCTCATCAGATCAACGCTTTCCAGTTGATTGGAATGGCATCATCCCTTGATCTTTCAGGGTTTTTCGAGGATGAGGAAGTGTCCCAAAGGAGGATTAGATTCACATCAACGCATCCACCCAAGGATGCCTTCGACAAGATTGAAAGCTCAGCGACGGAGTTGGGATTCCAAGTTCAGAGGGGGCACAGCAAGCTCAAATTAATGCGCAATTGCAAGGGATCAAAGAACCCTGAGTCATTTATGGTGTCCGCCGAGGTTTTTGAGCTTGGCCCTTCTGTAAATGTTGTAGAACTTAGGAAGTCCAACGGAGACCCTGCACTGTATAGACAGCTCTGTGAGAGGATCTCCAGTGACATGGGGGCGCGCAACACGGAGCAGATCTTCGCAACGGCATCGCTTGAGGATGATCTTCAGAACAGCAATGCAGGGACGCCCGCTGTTCGCTTTGTAACGAATGCTGTGTTCTGCAAAACTGCAATGTTGTAG</cdnaseq>

Protein Sequence

<aaseq>MVKEGREALLGGYEMGRTLGEGNFGKVKYARHLATGGHFAVKILDRGRVVSLRAGDQIRREIATLKLLRHPHVVRLHEVAASKTKIYMVLEFVNGGELFQRIAVKGKLSEKEGRRLFQQLIDGVSYCHDRGVYHRDLKPENVLVDQKGNIKISDFGLSALPQHLGNDGLLHTTCGSPNYIAPEVLQNKGYDGSLSDIWSCGVILYVMLIGYLPFDDRNIVVLYQKIFKGDTQIPKWLSHSAQNLLRRILEPNPMKRIDMAGIKSHEWFQKDYIPILPYDDDDEDVQFGARLPAKEQINDEPGDKNSHQINAFQLIGMASSLDLSGFFEDEEVSQRRIRFTSTHPPKDAFDKIESSATELGFQVQRGHSKLKLMRNCKGSKNPESFMVSAEVFELGPSVNVVELRKSNGDPALYRQLCERISSDMGARNTEQIFATASLEDDLQNSNAGTPAVRFVTNAVFCKTAML</aaseq>

Gene Sequence

<dnaseqindica>1..234#918..989#1111..1218#1359..1439#1523..1576#1654..1779#1869..2078#2201..2305#2544..2660#2770..2832#2927..3001#3097..3252#ATGGTGAAGGAAGGGAGGGAGGCGCTGCTGGGCGGGTACGAGATGGGGAGGACGCTCGGGGAGGGCAACTTCGGCAAGGTGAAGTACGCGCGCCACCTCGCCACCGGCGGCCACTTCGCCGTCAAGATCCTCGACCGCGGCCGCGTCGTCTCCCTCCGCGCCGGCGACCAGATTCGCCGCGAGATCGCCACGCTCAAGCTCCTCAGGCACCCCCACGTCGTCCGCCTCCACGAGGTCAAATTCCATTTCATCCTTTTCGCTTAATAAACGCCTAATTCGTCCAAATTAGTTTTTTTAGATAATGAATTCGTCGAGATTAGTTTGAGTTCGCATCGGAGATTCGACGGAAAATACGAGTTTCCTTTTTCTTTTTTTCTTAGTGTTATAATCATTGCTAACTTTAGCTTGCGATTGCGTCGTCCGTCTCCGCCGCCGGTTTCTCGCCGGCGGCGACGGCGCCGCCGTGTGAACTGCCACGTGGAGCAGCCGATCCCGCGGCCGCACGTAGACTAGGCTCGTGCCACGTGGCGTTGGTCCACCTGGCAGTGTGGGGCCCTCGCGGCGCACCGTCGTCTGGTGGGCCCACCAATTATTTTTGCTGGACCATGGAGACTTTGTCTGGTGAGAACCGGATGCCGCTCGCCGGAATTGTTCGCCGGGGGCCCTCGCCGTCAACATCACCGTCTTCTTCTCCATCTCCGGCGGGTGCTCGTGATCCCAAATGTGGCCACGCATGGCCATTGCCGACTAGTGGGTAGCACCGTCGTTGTCGCATTTATGTCACGTTTTTTTTTTTCTTTCACTACGAAAACGAGAGGAAATTCTATGGTTTAGTCTCATGTAAGCAACTACTAACTTAAGAGAGTAATAATGCCACGTGATCACGTCTTAATCTTGTTCTTCGACTCTTGATTCAGGTTGCTGCTAGCAAAACGAAGATTTACATGGTGCTTGAGTTTGTCAATGGAGGTGAACTGTTTCAGAGAATTGTAAGCCCTTGTTTCAATGATCTTTTACGCTATTTCCTCGCTGCAAAAATTTTCATGCCAGCTACTATGGTGTGTTCTAACATTTGAAGCTGTTAATTCTTTGCGATTAAAAATAATATAGGCAGTAAAGGGAAAACTATCAGAGAAAGAAGGAAGGAGGCTTTTTCAGCAGTTAATTGATGGTGTTAGCTATTGCCATGATAGGGGAGTCTACCACAGAGACCTCAAGGTAATGGAAGATTTGTTTTAGGGCAAACTGCTAAAAATTTTATGAATTATCATCTGTGATGCACTTAGTTAGCAATATCGGTCGGTGTGGCTTCATGAATCTGTAACATAATTCTTGTTAAAATTATTCCATTGGTACAGCCTGAGAACGTTCTTGTGGACCAAAAAGGCAACATCAAGATCTCTGATTTTGGTCTTAGTGCTTTACCTCAACACCTCGGGGTATGATTTGTCGACTTCAGCTGTACAAAATGTTTTTCTTAAATATTTTTTTTCACTGAATTGTAAAGTTTGGTACTTTTCAGAATGATGGATTGCTGCATACTACCTGTGGTAGCCCCAACTATATTGCTCCTGAGGTAAGTGAAAGTTCCTTTCAGTTCAACTGAATTATTATCTTGTAAAGCTTGCTCAACCTTGTGCTAAATGCTTGCAGGTTCTGCAGAATAAAGGATATGATGGATCCTTGTCAGATATCTGGTCTTGCGGAGTAATCCTTTATGTAATGCTTATAGGATATCTTCCGTTCGATGACCGAAATATTGTTGTTCTGTATCAGAAGGTACTGATTTATATCAAACCGAAGTAATATTATTCTGTTATTGTATTCTCTGATCATTTTTAGTGACTATGTTTATTCGGTTTGATTAGATTTTCAAGGGTGACACTCAGATCCCAAAGTGGCTTTCACACAGTGCACAAAATCTTCTTCGGAGGATTCTTGAACCCAATCCGATGAAGAGGATCGACATGGCAGGGATCAAATCACACGAATGGTTTCAGAAGGACTATATTCCTATTCTTCCATATGATGATGACGATGAAGATGTACAGTTTGGGGCACGTCTCCCTGCCAAAGAGGTAGGGAGAGATTAGTAGACTTCATGACTCCATTGGGGATTATCTATGTCCTGAACAGTAAATTTAATTTTGGTGTTTGCAACTACTGACTGGTAAGTTTTGGTTTCTTTTCTTTTCTGAAGCAAATCAATGATGAGCCTGGAGATAAGAATTCTCATCAGATCAACGCTTTCCAGTTGATTGGAATGGCATCATCCCTTGATCTTTCAGGGTTTTTCGAGGATGAGGTTTGTACAGTGCCTTTTCAGAAATTTCCTTCCAGCACTTCCATCTCCTTACCAAGGATGAAATAACCTGAAAATAGAATGTTTCTATCTTCTCAAAATATCATATGCAGTTGAAGTGAAATAACTTATTTCCCAGGAAACTGTTGATAATCACCCTGGATGAACTTGTCTTAAGCCACTTGTGATTACATTTTCACGGGAAAATGGAATGAATAATTCATTGCCTGACTTGTTGCAGGAAGTGTCCCAAAGGAGGATTAGATTCACATCAACGCATCCACCCAAGGATGCCTTCGACAAGATTGAAAGCTCAGCGACGGAGTTGGGATTCCAAGTTCAGAGGGGGCACAGCAAGGTCTGTACAAGCCTTTCATCGTCTTCGTCATATTACAGCCTTACAGGACATACTAACACTACCTTAAACGTTTCAAGAAACTAAAAATGGTTTGAACATTATTTTTCAGCTCAAATTAATGCGCAATTGCAAGGGATCAAAGAACCCTGAGTCATTTATGGTGTCCGCCGAGGTAAAACACAAAGAACGAAAAAAAATTTAATGCAAAAACACGATGCAACTGCTGGTCAGCTAAAAGAAGCGGGGTGCCATTTTTTTTATGTCAGGTTTTTGAGCTTGGCCCTTCTGTAAATGTTGTAGAACTTAGGAAGTCCAACGGAGACCCTGCACTGTATAGACAGGTAACAGCAGCTAAACAATTGCAGATTTGCAGTTGCCACTGACTTGACTGAAACTGGAGCAAGATTACCAATTTCTTCTTGAAATGTTTTTGCAGCTCTGTGAGAGGATCTCCAGTGACATGGGGGCGCGCAACACGGAGCAGATCTTCGCAACGGCATCGCTTGAGGATGATCTTCAGAACAGCAATGCAGGGACGCCCGCTGTTCGCTTTGTAACGAATGCTGTGTTCTGCAAAACTGCAATGTTGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018856

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA018856&oldid=47612"