BGIOSGA018929

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Revision as of 02:43, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018929| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018929, complete gene.| tag = OS05G01...")
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Gene Name

BGIOSGA018929

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018929, complete gene.

LocusTag

OS05G0116700

Ensembl Transcript ID

BGIOSGA018929-TA

Ensembl Protein ID

BGIOSGA018929-PA

Length

3897

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:935295..939191

Sequence Coding Region

939092..939191,938904..938989),complement(938547..938636,936564..938441),complement(935983..936172
,935295..935890

Genome Context

<gbrowseImage1> name=IndicaChromosome05:935295..939191 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:935295..939191 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTGCGCGGCGGCGGCACCACCGGTGGCTCGCGACCCGCGGCGAAGCACCACCGCCGCTCGAGGCCGCCGTCTTCGCCGGCTCCGTCGTCGCGGCGAGCGGCACGGACGGCAACCACCTCACCGGAGTCGAAGGGCGCGACGGCGTTGCAGGATCCGGTGGTTTCCTCCATGGAAGAGACCTCTTTCACTTTTGAATTCAAACGAGGGTCTAAAAGAGCTAAGAAAACGATGCTGCCTGAAGAATCACATAAAGGGAAAGATGATTCCACGAAGGGTTTCTCTAACAAAAGAAATCTGGTTCCTGCAAAGACACCATCTGCAAAGGAAAGACCGGAGCAAGTGGAGTTCACACATTGTTCACCTGGTATTGTTGCCAGGCTCATGGGACTTGACACCGTGCCTCGCCCCAAGAAAGCTCTTGACCGGTGCCAAAGTGACATTCAGTGCAATATGCAGCGGGTCCTATCTGGAGGTGATCAAGTCTATGATGCTTCATCTGAGGATCAACCATGTAGCAGCAGTGCTGATGATCTTCCTGAACTCAAGGATGTTTTCGAGGTCACTGAGATGGAGAATAAGGAGACGTGCATTGGGTTGCAATCAGGGAACGAGGAGCCATGTCCCAGGAGTGATAAGGATGATTTGGAATTTGTGAGGCAGAAATTCTTGGATGCGAAGCGCCTTTCCACCGATGAATCCCATAGGAATTCTAAGGAGTTTGCTGAAGCACTTGAGATATTGTACTCCAAAAAAGATGCCTTCCTTGAAATCCTTCAGGAGAACAGTGGTGCATTGCCAGGATTCTCAGGGCACATCTTTGGTCACAATGGATTACAATACTCCAAATTGTTTGAGCAAGAGAACTGTTCTCGCATGGGTGTTGAACGTGACGAGTTTTTTAATGTACCAAAGGAGTTGGAAAATCCTATTCCTAGTAGTCGTCTCAACGAAACTTATGGTGTACCACTGGATTCTTTGCCACCAAAAGGGAGCAAGAGTAAAGGTTCAAGCCGTCGTTCCCAAATTGTTGTTCTGAAACCAAATCTTCAGAGGAAAAGTTTTACACCTGTCCTATCAAGTGAAACATCGCATTTTGGTGAAATGAGCACTCACAACTGTTCAAGGCCCCAACACCATTGTATGCATAGGGGGCGAGTCACGCACTCTGCACCACTTAACAATGATCAAGTTTTACAACCAAAACGAGACACACCTGGACTGAGGGGTGCAATAGAAACCCCTAAAATAGGTTCCAGAAGGAAATCGTCTGAGAGAGAGTGTCAGCTTGCAATTGGCAGTGGAAGGGCAACAGATACTCCTAGTTCTTTTGAAGATAACCTACCAATTTACCCACCCAATCATTCTGTTGGATCATCAGTCTGCAGAAAGGCCAAAAAGTACCTCTCGGAACGATGGCAGATGGCCTATCAATCTGATGAAGAAATCTCAATGCCTAAAGATACCATAACATTAGGGGAGATGCTTGAGATGACCGATAGAGATGCGACAAAAGTAATCACCCACAAGATTTCATCAGAAACCAATTACAATCATGATAATGTGCAGAAGGCACCAGCCTGTCCTGTTGGTATCAGTAGTAAAGATGGTTGGAAGACAGGGATTTATTGTAAAGATAATTCAAGATCTGGCACATCGAGGAATTTTTCTAGGTCGAAGTCTCTACCGACCTCAGCTACCAACAATGCAAAATTACCGTGCAGGAAACAATCTGCACCAACTTGTAACCTGCCCATTCTGAAAGATCTATTGAATGCACCAACTGATGAATCTGGAAGTGAACATGTCAGGAATAGATCATCTTTTAGAAAAACAAAGCAGAGAAGTGGGAGGGCTATCATCCATGCAGGAAAGGAAAACATGCTACCTGTGAAAGAGATTCATGTAACTTCAGAGAAAGCAAGACATAGTATCTGCATTTCCGATTTGTCTCGAGCAAGCAACACACATAGTGAACATCCTGATGGTGTTATGAGTAATGAGGATCACCAAACATCTGGTTCTACTGCTCTAGATGATGATTTACAAAGTTCTAAAGAAAGGATGGGGTGGACAGAGCTGAAACTAACACCACCATTACCAGTGACAAAAGAAGACACATCGATTCATAATCAGGACAACATAGTGTTGAAGGACCAGGAGGGGAGAAACCAACAAGTGGAGATTGACATCGCTGAAGCTGAATCTCAAGCAATAGATTCTTCTCATATCATAAGCTTAGAAAATCACAAATGCTCAAATTCAACTGCTTCATTGCAACAAATTTGTGGACATGATACTGCATATTCTGGAATTTTTAAAGGCGTCAGTGACGGTATTCAAGAACTTAGAATGCAACTTAAGATGCTGAAGATGGGTGACCAAGATGATACCTGTGGAGATGATATCTATATGTTGTCGAGTGATGAGTGCAGTGATACAGACAACTTGACCTATCAGCTGATGGAAGAGCAATTACCTGTATTTAAGGATGAGTACGACAGGGACTTCAGTTATACAAATGATATACTTGGTTCAGCATCTGATTTTCTAGTCTACCCAGAAGATTGGCAAGTGAGCCCAGATGTGTTTGTGTGGCTTGAAGACAAGTACAGCAAGCTGCTTCTATGGTCGAAATCGGACAGGAGACTTTTGTTTGACCTCATAAACTCCATCTTAGCTGATATGACTGCTCCAGGCAACAGTCTGTGTTCAAATATCATGGTGAAGTGTTGGTCTGAAATGGATCCAAGGAAGTTAGCTGAAAATGTTTGGCAAACAGTGCTCAATAGGAGGAATTATGAACCCTTTTCTTTGGATTGTGTTGAAGCTTTGCCATTGGACCATCATTCTGAAGTTGAAGCAATAGGAGCAGAGATTGTCAAGATGTTACATGATGATATTCTAGAGGAGTCTGTAGCTGAATTCATATCACAGTAG</cdnaseq>

Protein Sequence

<aaseq>MLRGGGTTGGSRPAAKHHRRSRPPSSPAPSSRRAARTATTSPESKGATALQDPVVSSMEETSFTFEFKRGSKRAKKTMLPEESHKGKDDSTKGFSNKRNLVPAKTPSAKERPEQVEFTHCSPGIVARLMGLDTVPRPKKALDRCQSDIQCNMQRVLSGGDQVYDASSEDQPCSSSADDLPELKDVFEVTEMENKETCIGLQSGNEEPCPRSDKDDLEFVRQKFLDAKRLSTDESHRNSKEFAEALEILYSKKDAFLEILQENSGALPGFSGHIFGHNGLQYSKLFEQENCSRMGVERDEFFNVPKELENPIPSSRLNETYGVPLDSLPPKGSKSKGSSRRSQIVVLKPNLQRKSFTPVLSSETSHFGEMSTHNCSRPQHHCMHRGRVTHSAPLNNDQVLQPKRDTPGLRGAIETPKIGSRRKSSERECQLAIGSGRATDTPSSFEDNLPIYPPNHSVGSSVCRKAKKYLSERWQMAYQSDEEISMPKDTITLGEMLEMTDRDATKVITHKISSETNYNHDNVQKAPACPVGISSKDGWKTGIYCKDNSRSGTSRNFSRSKSLPTSATNNAKLPCRKQSAPTCNLPILKDLLNAPTDESGSEHVRNRSSFRKTKQRSGRAIIHAGKENMLPVKEIHVTSEKARHSICISDLSRASNTHSEHPDGVMSNEDHQTSGSTALDDDLQSSKERMGWTELKLTPPLPVTKEDTSIHNQDNIVLKDQEGRNQQVEIDIAEAESQAIDSSHIISLENHKCSNSTASLQQICGHDTAYSGIFKGVSDGIQELRMQLKMLKMGDQDDTCGDDIYMLSSDECSDTDNLTYQLMEEQLPVFKDEYDRDFSYTNDILGSASDFLVYPEDWQVSPDVFVWLEDKYSKLLLWSKSDRRLLFDLINSILADMTAPGNSLCSNIMVKCWSEMDPRKLAENVWQTVLNRRNYEPFSLDCVEALPLDHHSEVEAIGAEIVKMLHDDILEESVAEFISQ</aaseq>

Gene Sequence

<dnaseqindica>1..100#203..288#556..645#751..2628#3020..3209#3302..3897#ATGCTGCGCGGCGGCGGCACCACCGGTGGCTCGCGACCCGCGGCGAAGCACCACCGCCGCTCGAGGCCGCCGTCTTCGCCGGCTCCGTCGTCGCGGCGAGGTGAGGAGTTGTTGACCGATTCGTGCGTGCTCGCTTCCGGTTTTTTTTTTTCTGTTCGACTGAGCAAACTGGTTTCGCCATTGCCCTTGGTGATCGATTCAGCGGCACGGACGGCAACCACCTCACCGGAGTCGAAGGGCGCGACGGCGTTGCAGGATCCGGTGGTTTCCTCCATGGAAGAGACCTCTGTAAGCACACCATTTTTCATTTGAGTTTTACCTTCCCACTGTGCTGCGTGTTGTTGCCGTAAGCTTACTATGAGTAGTACGTGCTAATGTCGGCGAGCGAGTATGGCGTATGCTTTGATTCGTTTGATTTGCCTGTACTTTTGAGTAGCTCTGTTTCAGCAAGCTTAACGGCATTCTCAAGATTCAGATATTTTTATATCGCATCCTGTTGCTGAAATTCACTGTTGAGTCTCTCATTGTCCCCTAATGTTTACTTGATCGTACCAGTTCACTTTTGAATTCAAACGAGGGTCTAAAAGAGCTAAGAAAACGATGCTGCCTGAAGAATCACATAAAGGGAAAGATGATTCCACGAAGGTACAGGCTACTGCACTGTCCACATGTGCATTACTGCAGGAAATTTCGTTTCTTGCTGAGCTCCTGCCTAAGGCTAATGCGTTGTGTCCTCTCTATGTTCTGCAGGGTTTCTCTAACAAAAGAAATCTGGTTCCTGCAAAGACACCATCTGCAAAGGAAAGACCGGAGCAAGTGGAGTTCACACATTGTTCACCTGGTATTGTTGCCAGGCTCATGGGACTTGACACCGTGCCTCGCCCCAAGAAAGCTCTTGACCGGTGCCAAAGTGACATTCAGTGCAATATGCAGCGGGTCCTATCTGGAGGTGATCAAGTCTATGATGCTTCATCTGAGGATCAACCATGTAGCAGCAGTGCTGATGATCTTCCTGAACTCAAGGATGTTTTCGAGGTCACTGAGATGGAGAATAAGGAGACGTGCATTGGGTTGCAATCAGGGAACGAGGAGCCATGTCCCAGGAGTGATAAGGATGATTTGGAATTTGTGAGGCAGAAATTCTTGGATGCGAAGCGCCTTTCCACCGATGAATCCCATAGGAATTCTAAGGAGTTTGCTGAAGCACTTGAGATATTGTACTCCAAAAAAGATGCCTTCCTTGAAATCCTTCAGGAGAACAGTGGTGCATTGCCAGGATTCTCAGGGCACATCTTTGGTCACAATGGATTACAATACTCCAAATTGTTTGAGCAAGAGAACTGTTCTCGCATGGGTGTTGAACGTGACGAGTTTTTTAATGTACCAAAGGAGTTGGAAAATCCTATTCCTAGTAGTCGTCTCAACGAAACTTATGGTGTACCACTGGATTCTTTGCCACCAAAAGGGAGCAAGAGTAAAGGTTCAAGCCGTCGTTCCCAAATTGTTGTTCTGAAACCAAATCTTCAGAGGAAAAGTTTTACACCTGTCCTATCAAGTGAAACATCGCATTTTGGTGAAATGAGCACTCACAACTGTTCAAGGCCCCAACACCATTGTATGCATAGGGGGCGAGTCACGCACTCTGCACCACTTAACAATGATCAAGTTTTACAACCAAAACGAGACACACCTGGACTGAGGGGTGCAATAGAAACCCCTAAAATAGGTTCCAGAAGGAAATCGTCTGAGAGAGAGTGTCAGCTTGCAATTGGCAGTGGAAGGGCAACAGATACTCCTAGTTCTTTTGAAGATAACCTACCAATTTACCCACCCAATCATTCTGTTGGATCATCAGTCTGCAGAAAGGCCAAAAAGTACCTCTCGGAACGATGGCAGATGGCCTATCAATCTGATGAAGAAATCTCAATGCCTAAAGATACCATAACATTAGGGGAGATGCTTGAGATGACCGATAGAGATGCGACAAAAGTAATCACCCACAAGATTTCATCAGAAACCAATTACAATCATGATAATGTGCAGAAGGCACCAGCCTGTCCTGTTGGTATCAGTAGTAAAGATGGTTGGAAGACAGGGATTTATTGTAAAGATAATTCAAGATCTGGCACATCGAGGAATTTTTCTAGGTCGAAGTCTCTACCGACCTCAGCTACCAACAATGCAAAATTACCGTGCAGGAAACAATCTGCACCAACTTGTAACCTGCCCATTCTGAAAGATCTATTGAATGCACCAACTGATGAATCTGGAAGTGAACATGTCAGGAATAGATCATCTTTTAGAAAAACAAAGCAGAGAAGTGGGAGGGCTATCATCCATGCAGGAAAGGAAAACATGCTACCTGTGAAAGAGATTCATGTAACTTCAGAGAAAGCAAGACATAGTATCTGCATTTCCGATTTGTCTCGAGCAAGCAACACACATAGTGAACATCCTGATGGTGTTATGAGTAATGAGGATCACCAAACATCTGGTTCTACTGCTCTAGATGATGATTTACAAAGTTCTAAAGAAAGGATGGGGTGGACAGAGCTGAAACTAACACCACCATTACCAGTGACAAAAGAAGACACATCGATTCATAATCAGGACAACATAGTGTTGAAGGTATGCCGCAACAATATTCGTTTTATGATTTTTCACATTGTTTTTCTTGTTAACTTGTCAGCAGATACAATCATACAAATAATCAGCATGAAAAATTAACAGAATTCCTATAAATAGAAAATGATTTTTTAAGGAAATTGGCATTAAGAACTGATCCCCAGTTTTCCAAGTGTGAGGAAGTAAGTGGGTGGGTGGAGGTTGACACTGGACAGTTATCATGTTTTCATACTTCTAGGGTACCGAATGTTCTACTGGACTTTCATTTTGCTACTGTAGTTTATGGGCTAGTAAATTGCAATATCTTAACTTCATATAGTATGATATGGTATACATAGCTTTGAGTCATTTGTTGTTTAATTCTAATTATTAAAGTTACTAAATTTGGCTCCAGGACCAGGAGGGGAGAAACCAACAAGTGGAGATTGACATCGCTGAAGCTGAATCTCAAGCAATAGATTCTTCTCATATCATAAGCTTAGAAAATCACAAATGCTCAAATTCAACTGCTTCATTGCAACAAATTTGTGGACATGATACTGCATATTCTGGAATTTTTAAAGGCGTCAGTGACGGTATTCAAGGTATGTGTATCAAAAACTCATTCTACTTTTCTGCACTCCAATATTATCACATTGTTCATGTTATTCATGTTTGTCTCTTCCCATAAATGTAGAACTTAGAATGCAACTTAAGATGCTGAAGATGGGTGACCAAGATGATACCTGTGGAGATGATATCTATATGTTGTCGAGTGATGAGTGCAGTGATACAGACAACTTGACCTATCAGCTGATGGAAGAGCAATTACCTGTATTTAAGGATGAGTACGACAGGGACTTCAGTTATACAAATGATATACTTGGTTCAGCATCTGATTTTCTAGTCTACCCAGAAGATTGGCAAGTGAGCCCAGATGTGTTTGTGTGGCTTGAAGACAAGTACAGCAAGCTGCTTCTATGGTCGAAATCGGACAGGAGACTTTTGTTTGACCTCATAAACTCCATCTTAGCTGATATGACTGCTCCAGGCAACAGTCTGTGTTCAAATATCATGGTGAAGTGTTGGTCTGAAATGGATCCAAGGAAGTTAGCTGAAAATGTTTGGCAAACAGTGCTCAATAGGAGGAATTATGAACCCTTTTCTTTGGATTGTGTTGAAGCTTTGCCATTGGACCATCATTCTGAAGTTGAAGCAATAGGAGCAGAGATTGTCAAGATGTTACATGATGATATTCTAGAGGAGTCTGTAGCTGAATTCATATCACAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018929