BGIOSGA018969

From RiceWiki
Revision as of 02:43, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018969| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018969, complete gene.| tag = P0668H1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA018969

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018969, complete gene.

LocusTag

P0668H12.23

Ensembl Transcript ID

BGIOSGA018969-TA

Ensembl Protein ID

BGIOSGA018969-PA

Length

4871

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:298942..303812

Sequence Coding Region

303674..303812,303458..303576),complement(301989..302381,301037..301852),complement(300023..300235
,299478..299660),complement(298942..298995

Genome Context

<gbrowseImage1> name=IndicaChromosome05:298942..303812 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:298942..303812 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCAGGAAGAATTCGATTGGCCAACCTCAGTGTTATCAACATCACCAGAAACAGAAAATGTTACCTCCAGCTCTGTGAGAAGCACAACCAAGAATGACGTGGTTGTTCAGCAAGGTTCCATCTCTTCATACTGGCCATGGGATGTCATGAAACTTGAAAACGACACCCATTTTCTGTCTCATTCTTCAGGAGATGGGATGAAATGCACAAAGGCTGACCATTTTCTATCTCATGCAAACAGGGGTTCATTGAACTTGGATTATCAAGAACAACCTTCAAAGTCCAATTTTGCTACTGACCTTGGATCACATGCATATTCTAAGGAAGCCAGGACACTTGGAAGAGTATATCATGGGCAGCAGCCTTACTTTTCCCCTTCAAGCTGTTCTTGGGAAAAATCTTCTGCATTAAAAGTAGTGCCAAATAGTCCAGATGCATCAGGGCATATAGTCGGGGAAATGAGAACCAAAACCAACATCCTCAGTGCAAGGTCAAATTACCTTTCATATCCTACTGATGTTCCTCATATAAGGTATCGAGATGAAGTTAAAGTTGATCTTAGCCAAGATGATAATTCCAAACAGTACAGAAGACCTGATCAATTTACTGCCTTCTCAAACTTCAATGGTCAATCTTCTGAACACCTTGAGACAGCCAAAGGGGCAAACTACATGGATGAGATCACTCCAATTTCACGTCAATGGTGCTTTGATAATAGAGGCCCATCACTACCAAGAGGGCTGGTCTATGGTGATGAGATACCATCGCTATCTTCTAAGAAGTGTAATGGCAATGTTGCATCATCATATTCAAGAATATGGGATTATAGTGCTGAAACCTCATCAGTCAGACAATGCTATGGCGATAAAATCCCATCATTGTCTCACCATTGGCACTACCGAGATAAGATCCCCTTGCATTCTGGTCAGTGGTGCCATGATGCTGAGGCACGCCCATTGTCGAACTACCAGCAAGGTGCTTCTTATGGGAATGGTCGTTTAAGAGATAATATTTCCAGGGGTGGTAGGAATGAGCAAGTCAACATTATCTCAAGCAGACGTACTATGACAAAACCTAGGGTGGCTAACAAGGTTGTAAGCAGCACCGATCACTACAAGATTAATAAGGATAACCTATGGAGAAATTCTGAGGATATAAGGGATCAAGTTCGTGGTCCCCGGGCAAATAAATTAAATAATTCTTCAACATCATCTATCAAGAATAATGCCATCCCTCCTTTGGTCTGTAGAGATCAAATTAATAGACCAGAGTTCACAGTTCAGTATGAGCATGCAAAGTTCTTTATGATAAAGTCATATAGCGAAGATGATGTTCATAAAGGTATCAAATACAATGTTTGGGCAAGCACTCCAAATGGTAACAATAAGCTGGATGCTGCTTTTCATGAAGCTCAGATTTTAATGAAGGAGCAGGGCAAAAGGTGCCCTATATTCCTATTCTTTTCGGTTAATACCAGTGGGCAGTTTGTAGGATTAGCTGAGATGTTAGGTCCTGTTGATTTCAAGAAGACCATGGACTTTTGGCAGCAGGATAAATGGAATGGATTTTTCCCTGTAATGTGGCACATTATAAAGGACATTCCAAATCGGTTCTTCAAACATATAACTCTTGAAAATAATGAAGGCAAAGTAGTTACTTTTAGCAGGGACACTCAGGAGATTGGGCTGCCCCAGGGTCTGGAAATGTTGAAGATTTTCAAGGCATATCACCAGGGAACATCAATTCTGGATGATTTTTATTTTTACGAAGAAAAGGAAAACATGCGCCATGCCCAGAAGGGAAGAAATTTGGAAACAACCAATCAAGATTTGTTCTCTGATGACTTCAGATCAATATCAGTGATGGCAACTGGAGCTAAAGATCTTGAGAGTTTATGGGTCAGGAACTCGGGATAG</cdnaseq>

Protein Sequence

<aaseq>MQEEFDWPTSVLSTSPETENVTSSSVRSTTKNDVVVQQGSISSYWPWDVMKLENDTHFLSHSSGDGMKCTKADHFLSHANRGSLNLDYQEQPSKSNFATDLGSHAYSKEARTLGRVYHGQQPYFSPSSCSWEKSSALKVVPNSPDASGHIVGEMRTKTNILSARSNYLSYPTDVPHIRYRDEVKVDLSQDDNSKQYRRPDQFTAFSNFNGQSSEHLETAKGANYMDEITPISRQWCFDNRGPSLPRGLVYGDEIPSLSSKKCNGNVASSYSRIWDYSAETSSVRQCYGDKIPSLSHHWHYRDKIPLHSGQWCHDAEARPLSNYQQGASYGNGRLRDNISRGGRNEQVNIISSRRTMTKPRVANKVVSSTDHYKINKDNLWRNSEDIRDQVRGPRANKLNNSSTSSIKNNAIPPLVCRDQINRPEFTVQYEHAKFFMIKSYSEDDVHKGIKYNVWASTPNGNNKLDAAFHEAQILMKEQGKRCPIFLFFSVNTSGQFVGLAEMLGPVDFKKTMDFWQQDKWNGFFPVMWHIIKDIPNRFFKHITLENNEGKVVTFSRDTQEIGLPQGLEMLKIFKAYHQGTSILDDFYFYEEKENMRHAQKGRNLETTNQDLFSDDFRSISVMATGAKDLESLWVRNSG</aaseq>

Gene Sequence

<dnaseqindica>1..139#237..355#1432..1824#1961..2776#3578..3790#4153..4335#4818..4871#ATGCAGGAAGAATTCGATTGGCCAACCTCAGTGTTATCAACATCACCAGAAACAGAAAATGTTACCTCCAGCTCTGTGAGAAGCACAACCAAGAATGACGTGGTTGTTCAGCAAGGTTCCATCTCTTCATACTGGCCATGTATGCATCCGGCAGTTTCCAAATAAATATATTCTAGTTGAGGCTGTTTTTTGTACACCTTGTTTTATTCTGTGAAAATCTCTGTCTCATTCTGCAGGGGATGTCATGAAACTTGAAAACGACACCCATTTTCTGTCTCATTCTTCAGGAGATGGGATGAAATGCACAAAGGCTGACCATTTTCTATCTCATGCAAACAGGGGTTCATTGAACTTGGTATGGTACAAAACTATCTGTTCTACTATCGTTGATGGGAACATTTGAAGGGACATATTGCTGAAACATAAATACTGGGATGGGAATGGGTCACAGGGTAAATATATGGATACCTATTTGATCCACACTAGTTCAACTAAATACACAACATAAACTAGAAAAAAAAAAAGCAATTTTAGTTGATCAGCTTGCTTGAATTAGAGTGGCTCAATGGGCACCCATATATTGACCCACTCCCATCCCTAATAAAGAAGTTTTGTAGGTAAAGAAATAACACCCTAATATACTGTACTAATCACTCAATCAGTTCAGCAATTGATATAGAATTTCAAGTTGTTTGCATTATTTCAAAATTTTAGTTCAGTTGAAGTTAACAATAAAAGCAAGGACCAAACTGTAGCCAAGTTGGTTGGTTGGTCATGCAGGTGTGCATACCACCCACCTAGGTTAAATCTTACTCCCTCTGTTTTTTTATAGATGATGCCGTTGACTTTTGACATGATGTTTGACCGTTTGTCCTATTCAAAAATTTTATATAAATGTCAGTTATTTTGTTGTGACGTGTTTTCTCATTAAAGAACTTTAAGAATGACTTGTACTTTAGCATATTTACACTATTTTTTTGGAATAAGACGAGTCAATGGTGTCATCTATTAAAAAATGGCGGTAGTAGATCAAAGGCAGGGAGGCAAAGCAAGCAATTATATTCCTTTAATTAATTAGGAGTAGCTGCTGGATTTTTAGCCACACTTCAGAGTTTCACTTGATTTGAAACATGCCCCTTTATTCATCACTATTTTTTGACCAAAGGCTAGAATTGCTCTGCTTCTCATTAGAATCAATGTATATTTACAGTGAGTGATGCAAGTTGTGAAAAATCTTTCCTTTGTTAGTAGCTGTAATCAATATATTATAGTAAATAAAACCATCATCCAGGTTCAATGTGGTAATTCAATTGTGTTTCAATGTTAATATGCAATTTATGGATAACATGCACTGCATTGAAACGTAAAGCTTTGTTCATCAGGTGACCCCTTTTTTCTTTTTGTTTTGTTTTGAAACAACTCCCTTCTCAGGATTATCAAGAACAACCTTCAAAGTCCAATTTTGCTACTGACCTTGGATCACATGCATATTCTAAGGAAGCCAGGACACTTGGAAGAGTATATCATGGGCAGCAGCCTTACTTTTCCCCTTCAAGCTGTTCTTGGGAAAAATCTTCTGCATTAAAAGTAGTGCCAAATAGTCCAGATGCATCAGGGCATATAGTCGGGGAAATGAGAACCAAAACCAACATCCTCAGTGCAAGGTCAAATTACCTTTCATATCCTACTGATGTTCCTCATATAAGGTATCGAGATGAAGTTAAAGTTGATCTTAGCCAAGATGATAATTCCAAACAGTACAGAAGACCTGATCAATTTACTGCCTTCTCAAACTTCAATGGTCAATCTTCTGAACACCTTGAGGTACATCTGTTGATTGTGTTAATCATAATAGAGTTGTTACTTCTATATACATCTCTCTATCTGGCATCAGTAGAAAATAATTAAGATCATTTGAATTTGGGAGTATTTGACCGTGACAATTTTTTTGTTGAAACAGACAGCCAAAGGGGCAAACTACATGGATGAGATCACTCCAATTTCACGTCAATGGTGCTTTGATAATAGAGGCCCATCACTACCAAGAGGGCTGGTCTATGGTGATGAGATACCATCGCTATCTTCTAAGAAGTGTAATGGCAATGTTGCATCATCATATTCAAGAATATGGGATTATAGTGCTGAAACCTCATCAGTCAGACAATGCTATGGCGATAAAATCCCATCATTGTCTCACCATTGGCACTACCGAGATAAGATCCCCTTGCATTCTGGTCAGTGGTGCCATGATGCTGAGGCACGCCCATTGTCGAACTACCAGCAAGGTGCTTCTTATGGGAATGGTCGTTTAAGAGATAATATTTCCAGGGGTGGTAGGAATGAGCAAGTCAACATTATCTCAAGCAGACGTACTATGACAAAACCTAGGGTGGCTAACAAGGTTGTAAGCAGCACCGATCACTACAAGATTAATAAGGATAACCTATGGAGAAATTCTGAGGATATAAGGGATCAAGTTCGTGGTCCCCGGGCAAATAAATTAAATAATTCTTCAACATCATCTATCAAGAATAATGCCATCCCTCCTTTGGTCTGTAGAGATCAAATTAATAGACCAGAGTTCACAGTTCAGTATGAGCATGCAAAGTTCTTTATGATAAAGTCATATAGCGAAGATGATGTTCATAAAGGTATCAAATACAATGTTTGGGCAAGCACTCCAAATGGTAACAATAAGCTGGATGCTGCTTTTCATGAAGCTCAGATTTTAATGAAGGAGCAGGGCAAAAGGTGCCCTATATTCCTATTCTTTTCGGTCAGTAAGGATGAAATTCTCTTCTTCTAAGTATCATCCTTATTAAGAAAAAGTCCACCTAAAATAACGCTGAGATATATTATTTGGTGTCCTAGTACCTGTTGTGTTTGATGCTTAAATATGATAGTTAAGTGAGACATGCCGGTGCTTTTTTTAGTGCATGTTTGTTTGTGTTTAGTTTATTGTCTTCTATTTAGGAAATTGAGATGATTGGCTGTTGTATCTTCACTCTTCACTTGCGGACATTTTATGATTTTAGTTTTCATCGTGAATGAGTATTCTTAAGAAAACTATAGTGATTGATAGCCATGGATCCAGCTTCTACAGACAACCTGCTCCAGATTTTCTTTTTGACTTGGTTAATTATTTCAACAATACATTGAATTTCCTTTGAGCTTGTTTGATTAGGAGGGATTAGATTCTGATATCTTTGTATTGTTAAGATTTCAGTAGAATTACTTGCTCAGTCATAATCCCCACCGTCTGAAAGAGCTGATTTTACCTGAAATATTGGTCACAATGTCCTGCCATTAGATTGAGTAATGGGCTTCTCTAGAAGATTTGATCCACTGGATACCATTCACCAAATATGCCTGAAGCATTTTTTGTCTTCTTTAAGTCCGTTTTATCATGTGACAACCAAAAGCTCTTGAAGCAGCTCCATATCTCGTCTGTTGTATGGCTATTTTTATCATATGGTTACTACATGTGCCTGAAGCAATTCCTTATTATCTGTTTTATGTTTTATCATCTGTCCAATTTTCAAGATAGTTAATTTTATTATGATCCCTTTTTTTCCAGGTTAATACCAGTGGGCAGTTTGTAGGATTAGCTGAGATGTTAGGTCCTGTTGATTTCAAGAAGACCATGGACTTTTGGCAGCAGGATAAATGGAATGGATTTTTCCCTGTAATGTGGCACATTATAAAGGACATTCCAAATCGGTTCTTCAAACATATAACTCTTGAAAATAATGAAGGCAAAGTAGTTACTTTTAGCAGGGACACTCAGGAGGTACCATGCTTGTAGCTTTGTTCTGAGACTTTTTTTTTTGAAAGGGTTCTTATAGTTAGAAATGGAATACTCTCTTTTATAATTTGTTTAGTCGTAGTCTCTTTTATATTGGTACAATCAAGAACATAGAAACTAAAAAGTATTCCATATCTTTGAAAATGAAATGGACACTTAACTATTTTAAATTAGGTGTCTATATCAGGTTGCCAGGTTTTATTTCCAGTCCTCTGAAGAAAGGTTTCCCTGTCAGATTATGAATATTCTACATGATGTCAAATGCTGTTATTCCATGCTTTGATTTTTTTTATCCATTTGTATTGTTGATTCGTTTTTATCCAGCAACCTTTTGTCCTTCTATGTAGATTGGGCTGCCCCAGGGTCTGGAAATGTTGAAGATTTTCAAGGCATATCACCAGGGAACATCAATTCTGGATGATTTTTATTTTTACGAAGAAAAGGAAAACATGCGCCATGCCCAGAAGGGAAGAAATTTGGAAACAACCAATCAAGATTTGTTCTCTGATGACTTCAGATCAATATCAGTGGTATGTGCTTTCTATTTAGATCTATGTTTTGAATGGCTACTTGATAATAATTTTAAGACAAGATGATACTTTTGTTATGTAAATATATTTACGAACACCATGGGCATTTTGTGAACACTGATTGTGGTTGCTTGCCAAGTCCACATGTCATTATGCAGAAGTGCTCTTGATTAGAACGAATAATCTTCAAACCCTTCTTAACATAACGCTTTAAGGAGAAACTTCACGGTTTCCAGTCTATCTCAAGGAGAGAATTAACATGTATAGATCCTACTGTTGGAAACCAGATGATCCTGAACCATGTCGTTTAAGTTCTCACTATTTCGACCAACTAAGATACATAGAGAAAGTGAATATGAAAAAGGACTGTTGGAACTTCTCTGGATATTGTGCCGGTTTCTGCCACACATGGTCCGTTGTTGGGCTCATTGCTGCAAAACCAAACCATTGTAGCATGTATTGTGAAATATCTTCTGATGTAGATGGCAACTGGAGCTAAAGATCTTGAGAGTTTATGGGTCAGGAACTCGGGATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018969