BGIOSGA018989

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Revision as of 02:44, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018989| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018989, complete gene.| tag = OsJ_167...")
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Gene Name

BGIOSGA018989

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018989, complete gene.

LocusTag

OsJ_16771

Ensembl Transcript ID

BGIOSGA018989-TA

Ensembl Protein ID

BGIOSGA018989-PA

Length

7349

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:62212..69560

Sequence Coding Region

69432..69560),complement(69283..69345,68806..69107),complement(68631..68727,68471..68548)
,complement(68331..68390,68151..68255),complement(67609..67719,67134..67175)
,complement(66838..66954,66579..66766),complement(65760..66043,65545..65666)
,complement(65386..65428,65184..65275),complement(64656..64704,64320..64390)
,complement(64108..64227,63995..64012),complement(63348..63436,62858..62903)
,complement(62212..62259

Genome Context

<gbrowseImage1> name=IndicaChromosome05:62212..69560 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:62212..69560 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGACGCCGACGAGCTCGGCAGGAGGCTCGCCGCCGTCGCGGTCTCCGACTCCGACAGCGCAAACAACAACCTCTTCCAGGTGATGCGCGCCGTGGAGGACGCCGAGGCCACCATCCGGCAGCAGCTGGAGGAGAACAGCCGCCTCAAGGACGAGCTCATGCTCAAGACGCGAGAGCTTGACAGATTCAGGTCAGAGGCTACCAAGCCCACTTCTCTTGCCGACACCTTTTCAACTTCTCCCCATGGGACCTCAACATGCTTCGGTACCACTTCCTCGTCGCTCAATTCCAGGACCGCTCTAGCTGATCAGCACAATGGACTCTTTCACCACACTGACCAAATGCTGCACGATGCCATCAAGCTAAAGTACCTAGATACCGACCAGTCTAATGGAATGCCCAGGAAACTATCTGGGGAGCAGAGTGCGCCCGAGAGTCGTGTGCCGTCGCACCTCTCTACTCCGTCATCTCGCTCCCTGTCTCCAACTAGGCATCGCAAAGAAGGAGAGTATGATCCTAAGTTCAATCTACCTGGACAGTGCTTATTGCCTGCTTCAGAGGCAAACTCTACCATCATGTGGAAACAGGATCTTCTTGCTAAGGTTAAAGAACATGAAGAAGAGATCGCACAGCTCAGAAGGCATCTTGCTGACTACTCTGTGAAGGAAGCACAAATACTCAACGAGAAACATGTTTTGGAAAAACGCATTGCATACATGCGAATGGCATTCGATCAGCAGCAACAAGATTTGGTTGATGCTGCATCAAAAGCTTTATCCTACAGACAAGACATTATTGAAGAAAATATCCGTCTGACATATGCCTTACAGGCAGCACATCAGGAGAGATCCACTTTTGTATCTTCTTTATTGCCTCTTTTGACAGAATATAACCTTCAGCCTTCTGTTCTTGATGCTCAATCAATTGTTAGCAATCTGAAGGTCCTGTTTAAGCATTTGCAAGAGAAACTCGCTATTACTGAGGAGAAACTGAAAGAATCACAATACCAGCTTACACCTTGGCGAGCTGAATCTTCAAACAGTACAAATATTCCTGTGCAGGCGCCTTCTCATCCTCCTGGAAATGCAATAGTTACCACTAGCAAAGCCAACCTTGACATTGTGCCCCAGCAAGCATATTCTCATGTACAATCTCCTATGTCCTCTCCTGTTCGTGCTAGACGTGATTGGGATCTGTTGGGGAATGAGAACCATCAGGCTATCCCAAGTGAGGTTACTGCAGTAAATACAGAGCATGAAAATGTTGGAACCACCTCTCCGTCAAGCAGCAACCAAATTAAGAAGGATGTAGTAGCTCAAGGAACTGAACATGATTCTCGTGCTGTCCGATTTAACTTTGAATCCAAGAATCAGAATCCGTCATTCAAGGACCTCGTTAGGAATGATGTCCCAGAAAATCTGGAGGGAGCTGAAACGCATATTTCACAAGAACCTCCTGCACAATGGGGTCCGGAGGGCTCACCTAATTTGGCATCTGGTGTTGATGATGCGAACCCGCCATACCCTTATCTTCCTACTGTCCTTGAAGAGCCTAGTTCTTCTTTCTCTGAAGCTGCAGATGATGACCCACTACCAGCCATAGAAGGGCTACGAATCACAGGTGAAGCTTTTCCTGGAAGAGAGCTTCAAGCAAGTGGCTACTCTATCAATGGGACCACAAGTTGTAATTTTGAGTGGGTACGGCATTTGGAGGATGGATCAGTAAATTACATAGAAGGTGCAAAGCAGCCTTCTTATTTAGTTACTGCTGATGATGTGGACTCTTTACTAGCCATTGAAGTCCAACCTCTAGATGACCGGAAAAGAAAGGGGGAGATCGTAAAGGTTTATGCCAATGAACAAAAAAAGATTACTTGTGATCCTGAAACAAAGGAGCTCATCAAGAAAATTCTTTCAATTGGGCATGTATCCTATGAAGTTCTGCTGCCTGTTAGGTTTCTAGATATGTGGGAACCAGCTGTATTGGCAATAAAGAGGGAAGGTTACAGCATTAAGTGTAATGGCCAGCGTGGTGTTGTTATTACAGAAAAATTCCAGCAAGCCACTGCTGTTTGTTTCGACATTGAGATCAATATCCCATATGGGCGTCCTACTGAATTTTCTATATTGGCTTCTGATGGTGCTGAATACAATCTCAAGCCTGCAGAGAATGCGCCATCACGAGATACCATTGTTCTAATCTTGAGGCTGTTCAGAATGAAGGCAGTTGAGAAGAGTAAAGGAAGAAGGAAGGGCATATTCTTCAAGTAG</cdnaseq>

Protein Sequence

<aaseq>MADADELGRRLAAVAVSDSDSANNNLFQVMRAVEDAEATIRQQLEENSRLKDELMLKTRELDRFRSEATKPTSLADTFSTSPHGTSTCFGTTSSSLNSRTALADQHNGLFHHTDQMLHDAIKLKYLDTDQSNGMPRKLSGEQSAPESRVPSHLSTPSSRSLSPTRHRKEGEYDPKFNLPGQCLLPASEANSTIMWKQDLLAKVKEHEEEIAQLRRHLADYSVKEAQILNEKHVLEKRIAYMRMAFDQQQQDLVDAASKALSYRQDIIEENIRLTYALQAAHQERSTFVSSLLPLLTEYNLQPSVLDAQSIVSNLKVLFKHLQEKLAITEEKLKESQYQLTPWRAESSNSTNIPVQAPSHPPGNAIVTTSKANLDIVPQQAYSHVQSPMSSPVRARRDWDLLGNENHQAIPSEVTAVNTEHENVGTTSPSSSNQIKKDVVAQGTEHDSRAVRFNFESKNQNPSFKDLVRNDVPENLEGAETHISQEPPAQWGPEGSPNLASGVDDANPPYPYLPTVLEEPSSSFSEAADDDPLPAIEGLRITGEAFPGRELQASGYSINGTTSCNFEWVRHLEDGSVNYIEGAKQPSYLVTADDVDSLLAIEVQPLDDRKRKGEIVKVYANEQKKITCDPETKELIKKILSIGHVSYEVLLPVRFLDMWEPAVLAIKREGYSIKCNGQRGVVITEKFQQATAVCFDIEINIPYGRPTEFSILASDGAEYNLKPAENAPSRDTIVLILRLFRMKAVEKSKGRRKGIFFK</aaseq>

Gene Sequence

<dnaseqindica>1..129#216..278#454..755#834..930#1013..1090#1171..1230#1306..1410#1842..1952#2386..2427#2607..2723#2795..2982#3518..3801#3895..4016#4133..4175#4286..4377#4857..4905#5171..5241#5334..5453#5549..5566#6125..6213#6658..6703#7302..7349#ATGGCCGACGCCGACGAGCTCGGCAGGAGGCTCGCCGCCGTCGCGGTCTCCGACTCCGACAGCGCAAACAACAACCTCTTCCAGGTGATGCGCGCCGTGGAGGACGCCGAGGCCACCATCCGGCAGCAGGTATCCTATCCCATTACGATTTCATTTTTCATTTTTCTGCCCCCTCCCCCTCCCCCTCACTCACTCTCTCTCTCTCTCTCTCTCAGCTGGAGGAGAACAGCCGCCTCAAGGACGAGCTCATGCTCAAGACGCGAGAGCTTGACAGATTCGTAAGCGGCTCCCCGATCTGCCCTTTTCCTCTCCGTCTCTTCTTCTCCACCCGAATCTCACCTTACAATAATATGGAGTACATCCGCATCGCACAACTAACTAACTAACTAACTAGTACTGCAACACTCGTCGGAGGTACTAGTATTGATTTGCATTCATCTGCTGCTCTGCCAGAGGTCAGAGGCTACCAAGCCCACTTCTCTTGCCGACACCTTTTCAACTTCTCCCCATGGGACCTCAACATGCTTCGGTACCACTTCCTCGTCGCTCAATTCCAGGACCGCTCTAGCTGATCAGCACAATGGACTCTTTCACCACACTGACCAAATGCTGCACGATGCCATCAAGCTAAAGTACCTAGATACCGACCAGTCTAATGGAATGCCCAGGAAACTATCTGGGGAGCAGAGTGCGCCCGAGAGTCGTGTGCCGTCGCACCTCTCTACTCCGTCATCTCGCTCCCTGTCTCCAACTAGGTACCTCACTGCCAGCATTTTCCATCCCTGACAACTGCTCCTTTTCTTTTAAGGAAAATAATACACCTTCCCTTACAGGCATCGCAAAGAAGGAGAGTATGATCCTAAGTTCAATCTACCTGGACAGTGCTTATTGCCTGCTTCAGAGGCAAACTCTACCATCATGTGGAAACAGGTATACATAATTCTATTTGTCCGCCACTGGCATACATGTCATCTGCTGTGCTGTTCTCTGATCAAGGTATTTCCTTATTCAGGATCTTCTTGCTAAGGTTAAAGAACATGAAGAAGAGATCGCACAGCTCAGAAGGCATCTTGCTGACTACTCTGTGAAGGTGGCTATGCACAATAAGACTCACTACATTCTTTTTTCTACTCCTTTCCCAGGTATTTGACAGCTTATGTTTCTTGGTAGGAAGCACAAATACTCAACGAGAAACATGTTTTGGAAAAACGCATTGCATACATGCGAATGGTAAGTATTTTGTCTTATCAGGTATTGAAAAATCTCTTGGAGTACAACACCATTTTACAATGCATCTGTTTTCAGGCATTCGATCAGCAGCAACAAGATTTGGTTGATGCTGCATCAAAAGCTTTATCCTACAGACAAGACATTATTGAAGAAAATATCCGTCTGACATATGCCTTACAGGTAATTTATATTGCTAATATAATATCTCTCTAAATTCAGAGTGCAGAATCACATTCTCAATGGTCATGCTCTAGTTTTCACCAAATACACATTTTGAAGCCATTCCGATGCATCTGTTTTCCATATAGCTATAGTTTCTGATGTAATCTGTGGCGTATATCAGGTGAGCTACCTTTCTGCTACATAAAGTATCCTAAAATTGGAAGTAGATTGTCCAGTGTATATGCATGTAAACAAAGTTATAGTGCAACCTACATCGTAGCAACCGCCCATAAAATAGAAGAAGTGGTTCTTTTCGTCTCTTACTCGTTTCTCTGAAGGAGTAAAGGTTCTGATCACACATGATACAATGGATTTTCTTTATCTTCCTGAATTGTTCATAGTCTAATTTTTGTGATTTAACATATAATTCTACTTTTGTTACTTCATAGGCAGCACATCAGGAGAGATCCACTTTTGTATCTTCTTTATTGCCTCTTTTGACAGAATATAACCTTCAGCCTTCTGTTCTTGATGCTCAATCAATTGTTAGCAATCTGAAGGTATGTGCCATCTCTCTTATGCACACTTGATAATATTATATCCTTGTTTGTTCTTGATTAAGCCCCAAGTTTTCACCAAAAAAATCTATATTATCTTCAATAGCGATTCTCTATGATCTGAAGTTTTTTAAATATAAAAAAATGTTTAACAAATAAAAGACAAATATCTTCTCTAACATAAGATCTTTTATGAATTGTCTTAACAACAAACATGGAACCACTCCTTGCAGACCTCTTGTCAGGTGGGATAAGAGCAAGCTATCCTTTTTCTTTATTTTTGTTTTAATGCCAATATTGTAATATTACTGCGCATTACTGCATATTTTTGTTCTTGTGGGGAATAATCGTTGGAAAGGTACACGAGTGGGTTTGATCTTGTTCCTTACCTAGTTGAAGTTGACCTTTCACTAAACACTTATTTTTCTTTTTGTAGGTCCTGTTTAAGCATTTGCAAGAGAAACTCGCTATTACTGAGGTGTGCCAATTGATTAAATGTCATTGCTTTTATATGTAATAGCTTGTAAGAGAAGCCTGGGTTGTGAGCATACATTCACAGCCTGGCTAGTAGTGTGCTTTTTATTCTTGCACAGCTTATCGCTGATATTTTTGTATAGAAAAATGAAGCTGCATTCTTTGCAATTTTGGATGGTGCAGGAGAAACTGAAAGAATCACAATACCAGCTTACACCTTGGCGAGCTGAATCTTCAAACAGTACAAATATTCCTGTGCAGGCGCCTTCTCATCCTCCTGGAAATGCAATAGTTACCACTGTATGACTCTTTAATCCCTTTTCTCCTTTACTCTTTGAGTGCTGCATGTTCTAACTTCTCAAATTCCGCAGAGCAAAGCCAACCTTGACATTGTGCCCCAGCAAGCATATTCTCATGTACAATCTCCTATGTCCTCTCCTGTTCGTGCTAGACGTGATTGGGATCTGTTGGGGAATGAGAACCATCAGGCTATCCCAAGTGAGGTTACTGCAGTAAATACAGAGCATGAAAATGTTGGAACCACCTCTCCGTCAAGCAGGTTGTTATTTGTCTATCAAGAGTACAGCTCCCTAAGTTCTATTAAATTCATTCTAACTCTATCACCATAGTTTGTGCTTCCTTTTATTTGCCAAACTGAACTATTACATGGGTTTGCATTTCGCTTTGCAGTTCTTGACTTCTATTATCCTCGTAACTTTATTTCAGTATTAACTTCCCTTTTTCTAAGCATGCATCCCTGTGGCAAACCACATATATTTGGTGTAGCCTATAGGATTTGTTTGTAAAATGTCACCTTCAAGTACTGTCAACTGAAGAATTGAAAACAACATGTGCCGATGAGTTGCTTATTAAGGCACCCTCTTTGCAAATAACAGAGAGTTTCATGCCTTCGGAATACTAGGGTCATATCCCACCATGGGCCAAGATATGGTTTGCCATTGTGTAATTTGTGTTTTTTTTCTGTTACACATAAATGTAGCAATGCGCTTTGATGATCAAATATTTTTGAATAATCAGATAGTCAAATTGGCAAAGTAGATATCTTACCATGCCCAATCTGTTTTTTTTTACAGCAACCAAATTAAGAAGGATGTAGTAGCTCAAGGAACTGAACATGATTCTCGTGCTGTCCGATTTAACTTTGAATCCAAGAATCAGAATCCGTCATTCAAGGACCTCGTTAGGAATGATGTCCCAGAAAATCTGGAGGGAGCTGAAACGCATATTTCACAAGAACCTCCTGCACAATGGGGTCCGGAGGGCTCACCTAATTTGGCATCTGGTGTTGATGATGCGAACCCGCCATACCCTTATCTTCCTACTGTCCTTGAAGAGCCTAGTTCTTCTTTCTCTGAAGGTGTTACATATCTATATATATTATATTTATTGAATATTCTTCTTAGTATTTCTTTGGCTCTTATTGTAAAACATATTTTTCATGAATAAGCAGCTGCAGATGATGACCCACTACCAGCCATAGAAGGGCTACGAATCACAGGTGAAGCTTTTCCTGGAAGAGAGCTTCAAGCAAGTGGCTACTCTATCAATGGGACCACAAGTTGTAATTTTGAGGTGTGCTTCATAACTGTTCTCCTCATTCCAATATACCATCAAATTTGTTCACCATTTTGAATTTGATCTTAGCTCACTACAATGTTCCATTTTGCAATTTCTTTTTGTGCATACAGTGGGTACGGCATTTGGAGGATGGATCAGTAAATTACATAGAAGGTATTCCTTTTCACTTGATCATACAAGAGAAGCATGCTTCTAAGAGGCACTTTGTTGCATTTTTTGATGACATGAAACGATTGAAATGGCATTTTTGTTCCCTGTTGTAGGTGCAAAGCAGCCTTCTTATTTAGTTACTGCTGATGATGTGGACTCTTTACTAGCCATTGAAGTCCAACCTCTAGATGACCGGAAAAGAAAGGTTAATCCCCTCTGTCTTGCGCTGATCACTTCAATGTGGCAGCTTTTATCTCTCGCACTTTTGGAATCAATAGCTTGACCTGTATTTTCTTTCACTTCTCAGAATCAGATAAAGAGCACCACTCCAACTTGCTTTTCCTGCACTTATGTGACTTCCTGTTATCTATCTCATATATTTAGTAAATTGGAAGCAAATGTGTGACACACAATATTCCCACTCTGAAAACCAAACGAGCGGATCTTTACTGCCATTTGCAATAGTAAGAAGTGCAATTGCAGTGCACTTATATAGGACATGTCCTTTATTGGTTACAAAATTAACACTTAGCATGGTTAGGGTTGGCTTCCCTATCCATTAGTGGATTAGCTAGGTGCCCAGGTTTAACTCTTTGCTGATTTGAATGATTGCTTATTGTTACTTTCAGTAGATGCTGGAATCATTTGATTTGATCTGTGGCCTTGTACTTTTCTGTATTATAGGGGGAGATCGTAAAGGTTTATGCCAATGAACAAAAAAAGATTACTTGTGGTGAGTTTGCTGACATGATATTTGTTTTCTTTTAGTGGGCAGCTTAAATGGTTTGTATCAGATACATTTTTTTTGTTCAAAAGATGATGAATTACTTTATCACTGTGCCTCCTTGAAAGAATTCTAGGACAATTTTAGTTGCATGATGGTTGTTTCTAGCTGCAACATAGCAACAAAACAACCACCATCCTAATAGAGAAGTGGAAGGTATTTTCTTTTGGTATATTTCTAATTAATATTACATGAATAATCATCATTTATGCAGATCCTGAAACAAAGGAGCTCATCAAGAAAATTCTTTCAATTGGGCATGTATCCTATGAAGTTCTGCTGCCTGTATGTTATATTTCCTTTTTATATTGATATGTCAATCATTCTCACGACACTTCTTTTGTTGTCATATAACCATTGGACTATCAATCTTGCAGGTTAGGTTTCTAGATATGTGGGAACCAGCTGTATTGGCAATAAAGAGGGAAGGTTACAGCATTAAGTGTAATGGCCAGCGTGGTGTTGTTATTACAGAAAAATTCCAGCAAGCCACTGCTGTATGTCCTAGAAATCATTGTCTTTGAATTTACTGTTCTGAATGTATGCCAGTTAGAAAAAGGGTGCCTTTATAAATTTGTGATATATCTTTTAGGTTTGTTTCGACATTGAGGTTAGTAGGTTACGAATAATTGTATATGGTGCAATTGCTTTAGAAATTTTGGTGTTTGGCTTACTGCTTCCTTTCCGAAATTCCGATCTAGGTTGTTTAGTTGTTTTTGCATGGAAGAAAGGAATTAGTGTTTGAGAAACAAAATAAAAGTTGTCTAACCTTAATCTGATTTCTCAGACAAACTACAATGTACAATTTCCACAACAGTTTAAATATAGGCAAACCATAGAGAACCACCGCTGCAAACTGACCCTTAAACTTTCATTAACAGCATCTTTATAAATGATTAGCTGCATCATATTTGCATCGGCATTTTATATTGAAAAGGCACTTCCACAATGGTAGTCTTAGTACGTTTTGCATGTATGGTAAGAATCACTGTCAAAAACTGCAGCTTGAAGCCGTAAGCAGTAAAATTTACACTTTCTGTGACCATAGGTAGCAAGCATTATTCGTTTTAAACTTTCTGGGTTCTCTAATGTTCCAATATAGCCAATTCTGTTGAACAGAATTTTCTGTTTCCATTATCTGCACATAATCTTTTTTCTAATTTTCCAGATCAATATCCCATATGGGCGTCCTACTGAATTTTCTATATTGGCTTCTGATGGTGCTGAATACAATCTCAAGCCTGCAGAGAATGCGCCGTGAGTTTCATACTAAGCCACATCTGTGTTAGTAGTATATGTTTGTTTTTTTATAGGGTGAATAGCAAATTTAGTCTCTTAAGTTTTACCGAAGGCTCAATTTGGTCCTTCACGTTTCATTTTGTCCACATAGCTCCTCTAAATATTTGTTTTGGCTTGAAACTTGAAGGACCACTTTGGCTATTCACCCTTTTTTATACATCGAGCTGCCCTTGGTAGTTGTTATATCTTGCCCTTTATTTTGCACCTGCACCTGATAGGACTAAAAGACACCAGGATTAGCTTGTTGTTCCGTCCCAATGATTACAGACCCCACAACTTAAAATCAGCTTTGCACTCAACAATTTGTTCTTGGTGGTCATTATGTCCTGTTTTACTGTGACTGTATTTGACCCCAATTATTTGTGCCTTCATGACAAAATGTTGTGTATTTGAATTCTCCAGATCACGAGATACCATTGTTCTAATCTTGAGGCTGTTCAGAATGAAGGTATAAGCTCATTTATCTCGTTGAACTGTCAAGCATGACATGTTTGGTTGTTTCTTGTATTAGTGACACTGTATTAGTGATATCTTGGATTGTCTTTTGATTTGTGTCTGCTATGCGGAAGTGCACACTCTGTTAGTTAATCACGGAGCATGGGATTCTCAAGGATTGATGGTTAGTTTACAATCCCAAGTTTGTTGGAGTGGGAAGTGCCTAGTAAGGGCCGACCAGAAACCACCACCTGCAACCTAGCCATAACAGTGGTACATGCTCATGTTCCACATTTTTTATGTTGAGGGTAGGGTATCATTTGTGGCTGCTGCAGATAACTGGCTTTTAGCTGCACCGCATTCCACATAATAGTCGCATGAGATGATACCTAGAACAAGTGTATTTTGCTGCATATATAACTGAAAATTACCAAAAACAAGGTGGTGGTTTATTTGATATGACAGCATGACACACCTATTGCTATTGGTCGATATCAAGTCTGAGACTTTTAAGGGGATTGGGAAATTCACTTTGGTTTTGCATCTCTTCTATTGAGAGATTAATAATGTGCTGTCGTTATAATAAAATAGGAAATGCGGGTGTTTTGCAGGCAGTTGAGAAGAGTAAAGGAAGAAGGAAGGGCATATTCTTCAAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018989