BGIOSGA019085

From RiceWiki
Revision as of 02:45, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019085| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019085, complete gene.| tag = OJ1729_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA019085

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019085, complete gene.

LocusTag

OJ1729_E02.5

Ensembl Transcript ID

BGIOSGA019085-TA

Ensembl Protein ID

BGIOSGA019085-PA

Length

2983

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:1350039..1353021

Sequence Coding Region

1350039..1350058,1350823..1350997,1351402..1353021

Genome Context

<gbrowseImage1> name=IndicaChromosome05:1350039..1353021 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:1350039..1353021 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCAGACTTCAAAAACCAGGAATGGGCCTTCAGATGCCCCACAGAAGGCTTCTCCGGCAACACCACGGTCATCTCGGGTGGCGAAAACTGGAGGGAATGAAACTGACTCTGCAGGGATCACACCAACAAGAACCACTCCAGAGAGGAGCCCTAAGGTCACCGAGCGTCGGTCACCACGAAGCCCAATTACTGAGAAGAAGCGCCCAAGTAGGCTGTCCGAGTTGGAGTCCAGGGTCAGCCAGCTGCAAGATGAGCTGAAGAAGGCCAAGGAGCAGCTGAGCTTATCGGAGTCACGAAGACGCCACACACAACAGGAAGCAGAGGAAGCAAAAAAGCAGGAGCAGGCTGCAACCTCAAAGCTCGAGGACCTACAGCGCCAGCTTGCCGAGTTCTCAGCTGCGGAGGAGTCCCGACTCCAGGAACTGCGGAAGGTCTCACAGGAGCGTGACCGTGCTTGGGAGTCTGAGCTCGAGGCTGTGAAGAAGCAGCAGTCAGTGGATTCAGCTGCTCTGAGCTCAGCCTTGTCTGAAATTCAGAGGTTGAAGCAGCAGCTGGAGGCCACCACAGAGTCTGATGCAGCTCGTGCCAAGCAATGCGAGTTTGCGGAGTCTGAGCTCGAGGGCTTGAAGCAGGAGATGGAGCTCCGGCTTGCGACCATCGAGGGCCTGAAGGTAAACGTTGGCGAGAGCGACAAGGCTGTAGCTGAGGCGAACGCGGTGGCAGCTGAGACCAAGAAGCAGCTTGAGATGGCACAAGCTACTATTGACTCGCTGCTTGCTGAGGGTGCCCGGTTGCAAGAATGCCTGAGGTCGAAGGACGCAGAGCTCGGCCAGTCCATGGCTCGATTAGCCACACTGGAGGAAGATCTGAAGAAGGCACATAACGAGGATGATGTTGATGGCAGCTTTGGCAGCCCTGATCATGGTGAAGCTGTGGAGAAGGTGGTGGTAACTATCCCCAATGGCAATGGCAGCTGTGGTGGTTCTGGCGCAGAGATTGAGCAGCTGCGGACGGCGCTCGAGGTGGCTGAGATTAGGTACCAGGAAGAACAAACTCGCACGACGATCGAGACGAAGACCGCCTACGAAATGCTGGAGAATGCCAAGTCAGAGTACGACCGCAGAGTGCGCGATCTTGAGCTGGAGCTGAAGAGCAAGAACGATGAGCTCACTGAAGCGAAGGCCACTTTGGCTGTCAGGTGTGACGGGAAGAGCGATGTGATGCAGCCAGAGCTTGAGGCGAAGCTGATGAAGTCGATCACCGATGCGACGGAGCTGAAGGCGAGCCTGATGGACAAGGAGACGGCGCTGCAGAGCGTGATGGAGGAGAACGAGACGCTCAAGTCGGAGGCGGGGAAGAAGGCGGCGGAGGTGCAGCGGAGGTACGAGGCGGCGGTGGCGGAGCTGGAGCTGGCCAAGGCGGCGGAGCAGGACGTCCGGATGCGGCTCGGGTACGTGACGGAGGAGGCCGACAAGAGCAGCCGGCGCGCCGCCAGGGCGTCGGAGCAGCTGGACGCGGCGCAGGCGGCCAGCGTCGAGATGGAGGCCGAGCTGCGGCGCCTCCGGGTGCAGTCTGACCAGTGGCGCAAGGCGGCCGAGGCAGCGGCGGCGGCGCTGGGAGGAGGCGGTGGCGGCATTGGCAGGAACGTGGAGCGGACGGGGTCGCTGGAGCCGGCGGAGTACACCAACTCCATGATCGGCGGGAAGCTGGCGAGCTCGCCGTTCTCCGACGAGCCGGAGGAGGAGTCGCCGAAGCGGCGCAACAGCGGCGTGCTCCGGCGGATGAGCGGGCTGTGGAAGAAGAGCCCCAAGTGA</cdnaseq>

Protein Sequence

<aaseq>MQTSKTRNGPSDAPQKASPATPRSSRVAKTGGNETDSAGITPTRTTPERSPKVTERRSPRSPITEKKRPSRLSELESRVSQLQDELKKAKEQLSLSESRRRHTQQEAEEAKKQEQAATSKLEDLQRQLAEFSAAEESRLQELRKVSQERDRAWESELEAVKKQQSVDSAALSSALSEIQRLKQQLEATTESDAARAKQCEFAESELEGLKQEMELRLATIEGLKVNVGESDKAVAEANAVAAETKKQLEMAQATIDSLLAEGARLQECLRSKDAELGQSMARLATLEEDLKKAHNEDDVDGSFGSPDHGEAVEKVVVTIPNGNGSCGGSGAEIEQLRTALEVAEIRYQEEQTRTTIETKTAYEMLENAKSEYDRRVRDLELELKSKNDELTEAKATLAVRCDGKSDVMQPELEAKLMKSITDATELKASLMDKETALQSVMEENETLKSEAGKKAAEVQRRYEAAVAELELAKAAEQDVRMRLGYVTEEADKSSRRAARASEQLDAAQAASVEMEAELRRLRVQSDQWRKAAEAAAAALGGGGGGIGRNVERTGSLEPAEYTNSMIGGKLASSPFSDEPEEESPKRRNSGVLRRMSGLWKKSPK</aaseq>

Gene Sequence

<dnaseqindica>1..20#785..959#1364..2983#ATGCAGACTTCAAAAACCAGGTTAGTTTTTTTGTCCTAGAACTTTCATGTATCTTGCCTCTTGCTCTTGTTTTCGCAGCAGGTATGCAGTTCTGCTCATGCATGTGCGTGTCTGAGACAGTGGTTACACCATGACCAGACAGTACTAAGTAGTATCCAAGGTTGTGTGTATTAAAATGGATCTGATGTAGGGGGGGCCATTGCAGATTGAATTTTCCATGAATTGTTACTTGCCAAATATACCATAAATCTTACAGTGCACTAGTGTACTTGATCTTTGCTAAGTATTAGGCCTTTTCTTTTGGAAGATCATTTTTTTTCATCGGTAGCAACTTAGAACAGTCAAAATGAGAACATTCCTGTGCTTATTTACTAGTATTACCTTGCATGTTGCTGGATCTTGTACACAACCAAGTGAAGGTTGCCTACTGGTGAAATAGTTTTTGGATGTACTACTCTTGATTAGTCTTGTGTAAGCCAACTGTTTTCTCAGATTATTGTACTGCTCCTGTTATCAATCTCTTCATCATCTGGCATGTGAACTAATAGATCTGTATCTAAAAAAATCCGCACTAATAGATGGTATTTGAAAACATTGTCTTCAAAGTTGGTATATCAGTACACTCGGTTGTTCAACAACTTCATGCTTAGTGTACTGTTTGCGGTTAATTACAGTACTTACAATCATTAAACTTCTGTTTCCCTCAATACCTCTATTGTTGTTGTTAGTCTGTTGATCTTCAAGACAATTAGATAACATGTTTTTTGGCTATTGATTTGTGTAGGAATGGGCCTTCAGATGCCCCACAGAAGGCTTCTCCGGCAACACCACGGTCATCTCGGGTGGCGAAAACTGGAGGGAATGAAACTGACTCTGCAGGGATCACACCAACAAGAACCACTCCAGAGAGGAGCCCTAAGGTCACCGAGCGTCGGTCACCACGAAGCCCAATTACTGAGGTGCTGATATGTTTTGCAGGCATCGCGTTTACTTCACTACTTGGTGGATTCTTAGAAGCATATTTTTTTTTAAGAAGTGCACCTCAAATTCTCATATGTTTCAACACCAAAACTCTGCATATTTCATTATTCTGCAATGGCTTTGGGCAAGCAAGTGAACCTTTAGCACAACATACATTTTGGGACTGCAGATTTATTTATAGAAATGATATGTTCAGACACAAATTCTGAATATTTCATTAACCTGTAAGCAAGCAAGTAATATAATGATGGTGATTGACTTCAGAAACCATTTAGCACAGGAAAAATACATGTTCTTTTGTCATGTGGTTTTCTTTATTTGATTTAGTAAGTGTAAATTTTCTTAAATGGGTATTCGCTGAACAATTTGCACCCTGTTCCAGAAGAAGCGCCCAAGTAGGCTGTCCGAGTTGGAGTCCAGGGTCAGCCAGCTGCAAGATGAGCTGAAGAAGGCCAAGGAGCAGCTGAGCTTATCGGAGTCACGAAGACGCCACACACAACAGGAAGCAGAGGAAGCAAAAAAGCAGGAGCAGGCTGCAACCTCAAAGCTCGAGGACCTACAGCGCCAGCTTGCCGAGTTCTCAGCTGCGGAGGAGTCCCGACTCCAGGAACTGCGGAAGGTCTCACAGGAGCGTGACCGTGCTTGGGAGTCTGAGCTCGAGGCTGTGAAGAAGCAGCAGTCAGTGGATTCAGCTGCTCTGAGCTCAGCCTTGTCTGAAATTCAGAGGTTGAAGCAGCAGCTGGAGGCCACCACAGAGTCTGATGCAGCTCGTGCCAAGCAATGCGAGTTTGCGGAGTCTGAGCTCGAGGGCTTGAAGCAGGAGATGGAGCTCCGGCTTGCGACCATCGAGGGCCTGAAGGTAAACGTTGGCGAGAGCGACAAGGCTGTAGCTGAGGCGAACGCGGTGGCAGCTGAGACCAAGAAGCAGCTTGAGATGGCACAAGCTACTATTGACTCGCTGCTTGCTGAGGGTGCCCGGTTGCAAGAATGCCTGAGGTCGAAGGACGCAGAGCTCGGCCAGTCCATGGCTCGATTAGCCACACTGGAGGAAGATCTGAAGAAGGCACATAACGAGGATGATGTTGATGGCAGCTTTGGCAGCCCTGATCATGGTGAAGCTGTGGAGAAGGTGGTGGTAACTATCCCCAATGGCAATGGCAGCTGTGGTGGTTCTGGCGCAGAGATTGAGCAGCTGCGGACGGCGCTCGAGGTGGCTGAGATTAGGTACCAGGAAGAACAAACTCGCACGACGATCGAGACGAAGACCGCCTACGAAATGCTGGAGAATGCCAAGTCAGAGTACGACCGCAGAGTGCGCGATCTTGAGCTGGAGCTGAAGAGCAAGAACGATGAGCTCACTGAAGCGAAGGCCACTTTGGCTGTCAGGTGTGACGGGAAGAGCGATGTGATGCAGCCAGAGCTTGAGGCGAAGCTGATGAAGTCGATCACCGATGCGACGGAGCTGAAGGCGAGCCTGATGGACAAGGAGACGGCGCTGCAGAGCGTGATGGAGGAGAACGAGACGCTCAAGTCGGAGGCGGGGAAGAAGGCGGCGGAGGTGCAGCGGAGGTACGAGGCGGCGGTGGCGGAGCTGGAGCTGGCCAAGGCGGCGGAGCAGGACGTCCGGATGCGGCTCGGGTACGTGACGGAGGAGGCCGACAAGAGCAGCCGGCGCGCCGCCAGGGCGTCGGAGCAGCTGGACGCGGCGCAGGCGGCCAGCGTCGAGATGGAGGCCGAGCTGCGGCGCCTCCGGGTGCAGTCTGACCAGTGGCGCAAGGCGGCCGAGGCAGCGGCGGCGGCGCTGGGAGGAGGCGGTGGCGGCATTGGCAGGAACGTGGAGCGGACGGGGTCGCTGGAGCCGGCGGAGTACACCAACTCCATGATCGGCGGGAAGCTGGCGAGCTCGCCGTTCTCCGACGAGCCGGAGGAGGAGTCGCCGAAGCGGCGCAACAGCGGCGTGCTCCGGCGGATGAGCGGGCTGTGGAAGAAGAGCCCCAAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019085