BGIOSGA019117

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Revision as of 02:46, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019117| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019117, complete gene.| tag = OsI_183...")
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Gene Name

BGIOSGA019117

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019117, complete gene.

LocusTag

OsI_18309

Ensembl Transcript ID

BGIOSGA019117-TA

Ensembl Protein ID

BGIOSGA019117-PA

Length

4680

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:1890156..1894835

Sequence Coding Region

1890156..1890437,1893940..1894046,1894145..1894270,1894472..1894835

Genome Context

<gbrowseImage1> name=IndicaChromosome05:1890156..1894835 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:1890156..1894835 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGTTGGCGATGTTTGGGCACACGCCGTTGTTTCCATTACACCACGCCGCCGCCGCCGCCGACGACGACGACGACAACGACACCTCCCCACTGGCGATCGAGACCAGTAGAGGCACATGCGAAGTGGGTTCCCATGGCGCCATGATGGCAGGAAGCAGTGAGAGCGAGTACTACTCGGAGGAGGAGGTGGGATGGGAGGAGGAAGGTCTCGGAAGCAAAGGCGTGGAGGAGAAGAGGGAGTGGGCACTGAAGCGGCTCGACGACCTCGGCAAGCGCGGGCTATATCTCTTCTTCCTCCACCTGCTGCCATATGCTTGTGTAGTCAGTGTTGCAGAAATGACAAAGATGAGCAGCATGAAAGCTGATGGCAGTGTCCCCAAGAGAAGGAGGCAGGATGTTCAGAAGGTTGTGGTGTCTTTGAAAGATCATAAGGTTGAGCAAGGGCCACCTGCTGACAGTTGGTCCTGGAGGAAATATGGGCAGAAACCAATCAAAGGATCTCCTCATCCAAGAGGCTACTACAAGTGCAGCAGTTACAGGGGATGCCCAGCCAGGAAGCAAGTAGACAAGTGCAGGAATGATGCATCTCTGCTCATCATCACCTACACCTCAGATCACAACCATGACAACTATGCTGCTACTACTACAAATTCAGTCCAAGAACAGGCACATAATCCTGACACAAGTGATCCTCTCAGCAATGGCATGTCCCTTGCTGAGGTAGTAACAGTTGCATCCTCCAAGCTGTCCGGTGAAGAGGAGAGCTGTGACTTCTTTGATGAGCTTGAGGAGCTCCCAGTGTCTGCATCTCCCTTGCCAAGCTTATCTTTCATGGTCCAAGAGTGCAGCTTCTCTGATGCAAGAACACTGTTGTAG</cdnaseq>

Protein Sequence

<aaseq>MGLAMFGHTPLFPLHHAAAAADDDDDNDTSPLAIETSRGTCEVGSHGAMMAGSSESEYYSEEEVGWEEEGLGSKGVEEKREWALKRLDDLGKRGLYLFFLHLLPYACVVSVAEMTKMSSMKADGSVPKRRRQDVQKVVVSLKDHKVEQGPPADSWSWRKYGQKPIKGSPHPRGYYKCSSYRGCPARKQVDKCRNDASLLIITYTSDHNHDNYAATTTNSVQEQAHNPDTSDPLSNGMSLAEVVTVASSKLSGEEESCDFFDELEELPVSASPLPSLSFMVQECSFSDARTLL</aaseq>

Gene Sequence

<dnaseqindica>1..282#3785..3891#3990..4115#4317..4680#ATGGGGTTGGCGATGTTTGGGCACACGCCGTTGTTTCCATTACACCACGCCGCCGCCGCCGCCGACGACGACGACGACAACGACACCTCCCCACTGGCGATCGAGACCAGTAGAGGCACATGCGAAGTGGGTTCCCATGGCGCCATGATGGCAGGAAGCAGTGAGAGCGAGTACTACTCGGAGGAGGAGGTGGGATGGGAGGAGGAAGGTCTCGGAAGCAAAGGCGTGGAGGAGAAGAGGGAGTGGGCACTGAAGCGGCTCGACGACCTCGGCAAGCGCGGGGTGTGCTACCTCAGCCGCGTCCCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACAATTGTTATATACAAAGGGGTCATCTGGTACTTTAACCAGGAATAGAATTATCAATCTACAGTACACCACGAGACCAAAATTTCACTCTCTCAATATGCCATTCAGAAGTACTGTAAGTTCATTTTTAAATAGCTTCAAACAATAAAATAAAAGTTATGATTTCTTCTCCTTGTCATCAAACTAGTAGTAACTAATAGCAAGTGATGGATTGCCCAGAGGCATTTCATAACCATTTCTCAAGGAGTCCATGAAATTGAGATCTCAGTGCCAAGTTGCCAACATAAGAAAAGGATAAAATAATTAGAGAAAAGGCATTCCATTATTCAAATCACTTACTAATACTAAAGCTGGCACTGGTACTTGAGGTACTGTGCCCCATGCAGGAGAAAGCTTTCCCCTTCCAAGTTCCAATTGCCATCACACATGCAAAGATCAACTGTCCTGAATCCAAGGAGAGAGAGGGGCTCATAAATAGTGCTGTGGACTTGTGGTTTATAACTAATTAAGAGCTCAGAGCAAGCTAGCAAAAGAATCCAGATGGGAGCAAGTTTAAAAGATTGATGGCATGTACTAATGATACTTGCAAGATGGTGGTCCTGAGCTGAAAACAGAGGAGGACTGTTGATGAGCCAGGACCACAAACGGTTTTTCACCCTGGACCACAAACTACCTCCTTGGAACCTCCAACTGACTACTCCATCAAATACCATGTTTTCAACGTTTTGTTCCTCTTTTTCTAGATGTCAACTTGTGTGGGTATGTGGATGCACAGTTCTTGTTGAGATTATAAATAGTATATGTATATCTATACATACATATGTGATTTTGTAGTTATGCTAGAAGAATTTGTTTGCATATGCAAATGACAGATAAAACCATTAGCCAAGCGGTGGGACTTGGGAGCTGCCCTATAAGAGAATCTCGTGTCGTGGCTAGTTCTCTGTTTTAAACCGGACCATTTTATTAGAATATAATTCTCAATAATTGGTAAGCTACATAAAAAAATGAATTTCGCAAAGCTACATATACTTGGTAATTATCACAAAACTATAGATTTAAACCATAGTATCACAAAGCTACAAAATTAGGAATGAATTTGTTAGAAAACTACAGATTTAAGCCATTGTATCTTGAAACTACAGATTAATGTCATATTTTTCACAAACTACAGATGGAGCACCAAATTTCTCATAGAACTACACACTTTAAAAATTTACCATGGTAATAGCTGCACGACATTAAATATATAGTTTTGAGATACCATGGCTTAAATATATAGTTGCGTGAAATTTACTCTAAATAAAGAATAAGTATGTATCGTTATTATTCCATCAACTTATCTGATTGATTTGTTCACCAGGATAAAGTAAACAAATTAATTTTCTAGTTCAAGAATGTTCTTCCTTGATAAACCATCTAAGTTAAATACAATTTTAGAGGGATCGTTTTCTAGGGAGAATGGAAGACAAAAGAAGAAGAACCATAGTGCATTATTGGTCTTTGACCCTACCTTTTCCAGATAAAATCCCCTAGAAAAGGACTGCCACTGGCTAAGTCCAGAGGAGGAGAGCCTAACCGACGCAATCTCTATCTGTTCTCTGTGAATCACAACTGTGATTCTTATCTGAACTCTTACTTTTATCTGTTCATGAGAGCATGTTGACTATGAGTTCAATTATCTCCATTTTCTTTGTAACATTTTCCAATCTTTCTTTTATAAAAAGTTGCTTGAGCATGAATATATGCTTTTCTACACTAAGACACATTTGCTTCCTTCTCAAGATTTTCAGATGACAATGAGCTTAGGATGATCATCTAACCTCTCAAATGATTGTGCCTAAAAACATCTCTTTCAAGAGATTGTTAGGCCAGCTGATATCATCACCTCATACTTGACAGCAAAAAAAGAAAAAAAGAAAAAAAAGAGTTGTGTACTTTCAGAGAAGAAAACCTTGCTTTTGATGTGAGCTCACCTCCAATCCATGATGGTGCAATCTCCCAAAACGAAAGCCTGATGATAAAGAAGAACGCTCCATCACCTTCCATGGCCCTGCTCCAGCTGCAGTAAACCTAGCAAAGCTACTGACATTTATGAGCAGTTGATATCAGCTGGAGGCTCTGAACACTGAACCTATCAAATCTGTTCACTTATCTCTGTCTTCAGATTGATCCATGTGTAACGATCATCTCTGACTCCACTCCAGCATAGCTCGAGTCTCATCAGTCATCACAGGTCATTACTAGTATGCGATCAAGTAGGAGTAGCTGTCATGACAGGAAGTAAGAGTAACTGTATTCATAGGGTATCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCTCCGCTAAGATACGGGGAAGTTTATATTGGCCGACCTACGGATCCAGTTGATCCTAAATTCTTGAAACAAGCTTGCTTTCAAAATGGTCTCAAATACATCGATTTGGATTAAAAAAAACATTGTGAGAAAGATATTTATAATTTACTCTATTTTATATTACATCCATTTTCGAGCAATTGTCATTTTTACTGCACAATCAAATCTTAAGAATACGTTTTGTCATTAACATACAAAAAAAGTCGAGAGTTGTCCAGTGAAAATGATATAAGTAGATTTCTCATGAAAAATAATTTGATATCAATGTACTTTCATTATATCTTCACGGATAAATGAATAAGAAAAGTAACCATTAAAGGTGCATGTTATAGATCATATCGATGTTCTAAATTATAACAAAACGGAGGTACAGTTGACAGCTAGCTAGCCTCCAACTGCAACGTGATTTTACATGTTTAATACTATTCACCCAAGTCATAAATAATTATTGCTTTGATATAGACGTAGCTTTCTACAGAACATAGAATATTTGTAAGACCTAATAATACTAGCAGGATTAGTAATATATTAGTACTAGAGTACTCTTCAAGACAAACTAAATAACTAATCATGCTGTTTGTTTGTGCATGGCCAATCAAAATGTTCATAAAGAAAACTATTATTTTAGCTTCATTAAATAGATATATCATATATTCAAGTCATTAAGTAATTTGGTTCACCCATGGAAAATCACAAGGATCACACCTGCAAAATTGCAACCACTACTTTGTAAGAGAGGCTTGCAGGAGTCCACATCATCATTGAACTCACAGGAAAATGGTGGTGAGGCTCTGAAACAGTAACCCTGAACATTTTCAGTATTGCATTCAATTATTGGACAGTGAAAACATAGAAAAGAAAAGAGTAGCAAGGCAGAGAGGGAGATCAGCAACTTGCTCCAGCCTTTTTCAGCCAACTTGTGGTGTGGTGTTGGCACTTGGCAGTCACTATATCATCTCACTGTTCACTAACATATTCTGTGCCCTTCAGAGTAATAGTGCCATTGCTATTATCTCTTCACCAGCTATATCTCTTCTTCCTCCACCTGCTGCCATATGCTTGTGTAGTCAGTGTTGCAGAAATGACAAAGATGAGCAGCATGAAAGCTGATGGCAGTGTCCCCAAGAGAAGGTAGTGTTAGCTAGCACCTATATCCTTTGCTTCTGCTTCTGCAAATTCTCTTGTGATTGTGTTGTCACTGCAGCTGTCTATCTTTGTTACTGTTGCAGGAGGCAGGATGTTCAGAAGGTTGTGGTGTCTTTGAAAGATCATAAGGTTGAGCAAGGGCCACCTGCTGACAGTTGGTCCTGGAGGAAATATGGGCAGAAACCAATCAAAGGATCTCCTCATCCAAGGTATCATCACCTTGCACTAATTCCTCATACTTATACTGCACCGAATGTTCTTGTAATATCACAATCTTTTGCATGTGCACTGATTCTTTACATCACTGATAATTTCACAAGAATCAGGTTGTCTGATCAATTACTAGTACGATTTTTTTCCTTGTATCAATCCATTATCTTTGCTCTTTTTGTGGATCATGCTGTATCCAGAGGCTACTACAAGTGCAGCAGTTACAGGGGATGCCCAGCCAGGAAGCAAGTAGACAAGTGCAGGAATGATGCATCTCTGCTCATCATCACCTACACCTCAGATCACAACCATGACAACTATGCTGCTACTACTACAAATTCAGTCCAAGAACAGGCACATAATCCTGACACAAGTGATCCTCTCAGCAATGGCATGTCCCTTGCTGAGGTAGTAACAGTTGCATCCTCCAAGCTGTCCGGTGAAGAGGAGAGCTGTGACTTCTTTGATGAGCTTGAGGAGCTCCCAGTGTCTGCATCTCCCTTGCCAAGCTTATCTTTCATGGTCCAAGAGTGCAGCTTCTCTGATGCAAGAACACTGTTGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019117