BGIOSGA019145

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Revision as of 02:46, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019145| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019145, complete gene.| tag = OsI_183...")
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Gene Name

BGIOSGA019145

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019145, complete gene.

LocusTag

OsI_18370

Ensembl Transcript ID

BGIOSGA019145-TA

Ensembl Protein ID

BGIOSGA019145-PA

Length

4097

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:2339212..2343308

Sequence Coding Region

2339212..2339388,2340994..2341047,2342388..2342480,2342805..2342914,2343025..2343043
,2343123..2343308

Genome Context

<gbrowseImage1> name=IndicaChromosome05:2339212..2343308 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:2339212..2343308 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGGCCGTGGCGGCGGCGTCGCCGGTGCCGACGAAGCTGAAGGTGGGGTTCTACGAGCACAGTTGCCCGCAGGCGGAGGAGATCGTCCGCAACGCCGTCCGCCGCGCCGTCGCCCGTGACCCCGGCCTCGCCGCCGGCCTCATCCGCATGCATTTCCACGACTGCTTCGTCAGAAGCGTGAAAAGGGAAGCGGAAATGGGCGAGGCTTTTGTGACTAGGATGACAAAGATTGCTCAAACTACAATGGGCAATAACAATATTGCATTTGAGGGCCTCATTTTTGGTTGCCCTCACCTGAGCATATGTAGGATACAGCCTGTGATGATGCCGTTAGTACAGAGTTGTTCCCTCTCTCAGCCTCCCACCATCTTCTCCTGTCTCTCTCTGAGCATCACCTCCATTGCTGTCAAGGTGATGTTTGAGCTCAATCGGTCAAAGAAGGTTGAATATCTTCTCACTAACAAGCAGCCAAGGTCTCTTCACGGATTATTGTCCATGGATGGCCAAGCTTTTCAGCAAAATGAAAAGGTGAAATATAATGAAATATTATTCCCTTGCTCCATAAAGCTTCAGATGTGGAGTGAGCTTGCTGCTCTGCAAGCTGACATTCCATTTTTAAATGTAGAGTGTGCTTGA</cdnaseq>

Protein Sequence

<aaseq>MVAVAAASPVPTKLKVGFYEHSCPQAEEIVRNAVRRAVARDPGLAAGLIRMHFHDCFVRSVKREAEMGEAFVTRMTKIAQTTMGNNNIAFEGLIFGCPHLSICRIQPVMMPLVQSCSLSQPPTIFSCLSLSITSIAVKVMFELNRSKKVEYLLTNKQPRSLHGLLSMDGQAFQQNEKVKYNEILFPCSIKLQMWSELAALQADIPFLNVECA</aaseq>

Gene Sequence

<dnaseqindica>1..177#1783..1836#3177..3269#3594..3703#3814..3832#3912..4097#ATGGTGGCCGTGGCGGCGGCGTCGCCGGTGCCGACGAAGCTGAAGGTGGGGTTCTACGAGCACAGTTGCCCGCAGGCGGAGGAGATCGTCCGCAACGCCGTCCGCCGCGCCGTCGCCCGTGACCCCGGCCTCGCCGCCGGCCTCATCCGCATGCATTTCCACGACTGCTTCGTCAGAGTAAGTACACATATATCACGTGCCATTCTTGAAGAAGCTGTCAATGGCGTGTAATTAATTAAGGCCTCTAATTAGTCATGATTAGATGATACTTTCTCTGTTTTAGTCAAACTAATTTATAGAAAAATAGAACAACATCTACAGCACCAAATTAGTTTCACTATATATGTAACGTTGAATACATTTTTGATAATATCATTGTGTCGTGTTGAAAGTTTTATTATATTTTTCTGTAAATTTGATTAAATTAACCATTAATTTTTGACTATGGAAAAAATTAAAAACGACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTAAAAAGAAAAAAACCAAGCGAATTCCCACGATGAATTACAATAATAAAAATAATAAAATTAAAATAGCCTTCACCCACTGCAACGTATGGGCATTTTTTCTAATTTTTTTTTAAAAAATACACACACTTCTATTTCTGTCTGAGACCCACGAGAGCCCTCTCATGGTTTGTCTGGGCTACAAGCATGTCCTGTTACATCATGTGAGACCAAAGTACAAAACATACGATTATTACATATATATAGATGATCTGAGATCGATGTAAGATAACGCGTGTGCGTGGTTGATCGATCGATCGACCGAACCTCCTGTGGAGATGATGATGAACTGAGACCCATTTCTTGTGCGTGTAACTGACGAGCTCGATCGATCATGCATGCACTCAACTGCAGTTTGGTGATATATGATTGGTGCATTTTAGCTTTATACTATCTCCCTAATTATGGTGGATCTTGATTTTGTGGCATCGATCAATTAAGCATGGAAAAATTCGGTCAGACGGCATCCCTCCTGGAAAGGAACTCACCAGCTTAATGTATTGACCTCCTGGGTGTGCATGTGATCATCAGCTCTGATTCAATTAATCGTGGACCGTCAGATGGCGGTGCGGGTCGATCTGAACCGTCGGTTTTCTTGCCATGTCATCATATCTAACTTGATGTCATTTTCTCCTCTTCTTTCTGAAAAGCAAGTTTACAAAAGGGCACTCATGGTTATATCAAATATAAAAAAGATGTCGTTTCAAGCAGCAGGTGTGTTTAGTTCACGTCAAAATGGAAAGTTNGGTTGAAATNGGAACGATGTGACGGAAAAGTTAGAAGTTNGTGTGTGTAAGAAAGTTTCGATGTGATGGAAAAGTCGGAAGTTCGAAGAAAAATTTCGGAACTAAACTCGGCCATACAAGGTTAGATATATAGAGACATTTTTTCTCTCTTTTTTTTCTAGCTAGCTAGCTTCCTCAAGTTGCAAGTTAACCCTAGCTACTAGTGTCGTTGACACCCAATGTGTCACCTCTGTTTGAGCTCGATATCTATCGTCTTTTCGTATGGTTCTATTATGTTCCAAGCTTTCCTTCCATATGAAAAGAACACATCACCAGATGAACGCATTTGCCGCTTATGGAGCATGCCAATGATGGTGACACACTTAACAGGGCTAGCTACAGGAGGAGCCTTACAATTTGCACAAATCCTGGAGAACAATTCGAGTGGAATCCAAAAGTATATCGGATTTTAAGTCATGGATGGTTGAGTTGGTGCTGTCAGAGCGTGAAAAGGGAAGCGGAAATGGGCGAGGCTTTTGTGACTAGGATGACAAAGGTGTGGATATTTGGTTGCATCTGTTTCGATGGCACGAATCATGTATATGGACAAGAAATATGAGACAATGTCGGTACCAGAAAGGAGATGTAGATGGGTACAAATACAAGATCAATGTGGATCTGAGCGTGGTGTAGTTGAGGAATGGAGTGGATTATTATTAGACGCTGATGTTGAGATAAGGAGTATATATATGTTTTTACACCATAGTTATAGAATGCAACCGAATCATCGGATGATTTGTAGTATCTCACAACTATGAATACGACTTTTAAATGTGTATNTGTGTGCCTGTGTCTATGTGTAATAAACGGTCCATATATATAAGACCGTAACGATCCGGACTTAGAAGTCAAAGCCAACTAGAGATGATCACAACAATATGTTTGTGCATGGATGGATCTTCATAAAGTTTTATGGTACTTACAATTAAGTTCAACCTATCTCGTCAACAATACTGTTCCTTCTTTTTTTCAGGGAACAACACTGTTTCCTTGAGTATTGCATACAATCCAAGTCTATGATGTATGTTCGATTGTGTGACTGAGATACTATGCTTAATTGCTTATTAGAGCCACATTTTATAATTAAAAAGAAAGAAATAAATAATTGTTAAGGTCCCTATACCATTTTAGTTAGCGGACTACAAGTCACTAATACAAACCAAGGTCAGCTGTGAAATAACCAAATAGCCTACGCGGCATGTAGAGAACAAAAAAAATCAATTGCCGATGGTTTCTTCAATGGTGTCGATGGTTACATACTTCCATGTGAACTGTAAACCATTCACGTAAATGGCCTACGAGTATGTACTACATCAATACATATGCCGAGATAGTTTTATGCAGACGGTATGGTATTAACGTACAGGTTTCATGTTTAATAGGTTAGTCATTAACAATATTCCAAGACCAAGGGGGTCACATTTCTATTTTTTTAAAAACAAAACNATGCAGGTTACTACAAGCAAGCTACGTGCATACTACATGCCTTTCAACTCAGTCCCTGCACTTTAGAAGGAAGCATAAAATAAAGCAAGATATGACGGACATGGAGCACCAACCAGCAGGCCAGAAAATATATAGATTGATCAAGGAGTCATTTGATTTAAGTAAAAGCAAGTGCATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAATGGAAAACTTTTATTTCAGTTGAATTTCTCTGTTCCAAATTTGAATACTTAATCATGTTTTCTCTTTTCTAATATGTCTGTACTTCCTTTTCTCTTATACCTGTATCTTAAATGACACCATTTAGTATCTAATTCATGTGCCTCATTCTTGGTTTCAGATTGCTCAAACTACAATGGGCAATAACAATATTGCATTTGAGGGCCTCATTTTTGGTTGCCCTCACCTGAGCATATGTAGGATACAGCCTGTGGTGAGTCCGATGAATTTGCACCGGGAGTGGACTGCTGCTGGCTACTCATAAATTCTTCCTAAGCTTGATTTTATACCTTATATCCCTCCTTAATAAAGTGATAGTAAATAGAAATAGGATTGACCGTTCTTTGCTTTTCATTTTCTATTGGCAATCCTTAATGTCATTTGTAATGTCCCTGCTTGGGTGGTTGCCTTTTATTTTATATCAGTAAATGATTACAGAAAAAAGATATGTTGATAAAGTATGTCATTTGCTAATTCCATTTTATTGTACAGCTTGGGAACAAGGTGGCCGAACTGACCTTCTGCTTGCTTCCTGCAGATGATGCCGTTAGTACAGAGTTGTTCCCTCTCTCAGCCTCCCACCATCTTCTCCTGTCTCTCTCTGAGCATCACCTCCATTGCTGTCAAGGTGATGTTTGAGCTCAATCGGTAGGAGGTCAATCTGGTTGCACTCCATCTCATTTGAGAGTTGGTTCTTCCCTTTCTTCTCTACCTTACATCAAGATTTGTTCACTTAAATTTCTTTTGTTTTGCTTCAGGTCAAAGAAGGTTGAATATGTAAATAATTTGCCAACATGATTTTCTCATATTGGGTGGTTTAGTAAGTTAACACTTAATACCAATCACTTCATTTCAGCTTCTCACTAACAAGCAGCCAAGGTCTCTTCACGGATTATTGTCCATGGATGGCCAAGCTTTTCAGCAAAATGAAAAGGTGAAATATAATGAAATATTATTCCCTTGCTCCATAAAGCTTCAGATGTGGAGTGAGCTTGCTGCTCTGCAAGCTGACATTCCATTTTTAAATGTAGAGTGTGCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019145