BGIOSGA019212

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Revision as of 02:47, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019212| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019212, complete gene.| tag = P0431G0...")
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Gene Name

BGIOSGA019212

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019212, complete gene.

LocusTag

P0431G05.9

Ensembl Transcript ID

BGIOSGA019212-TA

Ensembl Protein ID

BGIOSGA019212-PA

Length

5064

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:3497303..3502366

Sequence Coding Region

3497303..3497503,3497605..3497742,3498578..3498659,3498773..3498849,3498944..3499050
,3499482..3499620,3500733..3500849,3500981..3501072,3501227..3501293
,3501408..3501486,3501586..3501677,3501882..3502025,3502226..3502366

Genome Context

<gbrowseImage1> name=IndicaChromosome05:3497303..3502366 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:3497303..3502366 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGCCGCCGTCGTCGCCATCGCCGGCGACGGGGACGCCGACGCCGGCCACCGCCGTCCTCTCCTCGCCTCCGCCGACGACGACGACGAGATCCGCCCCTACCCCGCATCATCCCCTTCGCCGCAGCACCCGGCGGGGGCTGAGCGGAAGCCGCGGCGGGTCGCCTCGCTCGACGTGTTCCGCGGCCTCACCGTCGCCATGATGATACTGGTGGACGACGCCGGCGGGGCGTGGCCGGGGATGAACCACTCGCCGTGGCTCGGGGTGACGGTGGCCGACTTCGTCATGCCCGCCTTCCTCTTCATCATCGGCGTCTCCGCCGCCCTCGTCTTCAAGAAAACACCAAACAAAACAGTGGCAACTAAGAAGGCTGCAATCAGGGCCATCAAACTTTTCATCTTGGGTGTAATTTTGCAAGGAGGATATATTCATGGCAGACACAATTTAACTTATGGCATTGATTTGGATCATATTCGATGGCTAGGTGTGCTGCAGAGGATAGCTATTGGATACTTTCTAGCGGCAATTTCAGAGATTTGGCTTGTCAACAATATTTCAGTGGATTCAGCTATATCATTTGTGAAGAAATACTTCATGGAGTGGATTGTGGCCGTAATGATTTCAGCACTTTATGTTGGCTTGCTACTCGGCCTTTATGTTTCAAATTGGGAATTTAAAGTTCAAACTAGCAATTCAATCCTTACAATTCCAACTCCGGGCAACGAAATTGGAATGAAAATGATCCAGTGTGGAGTTAGAGGTAGTCTTGGGCCACCTTGCAATGCAGTTGGATTTGTAGATCGAGTTTTACTTGGTGAAAATCACCTGTACAAGAACCCAGTCTATAAAAGGACTAAGGAATGCAGTGTTAACTCTCCTGATTATGGACCACTTCCTCCAAATGCACCAGACTGGTGCCTGGCTCCATTTGATCCCGAGGGTTTGCTAAGTACATTGATGGCTGCAGTGACTTGCTTTGTTGGATTGCATTTTGGACATGTTTTGGTTCATTGCAAGGATCATTCACCTCGAATGCTATTATGGCTACTAGCTTCCACTGTGTTAACAGTCTCAGGATTTCTACTTCAGTTATTAGGCATGCCTTTCAGCAAGCCTTTGTACACGGTGAGCTACATGCTACTAACCGGTGGGGTATCTGGATTCCTGCTGTTGTTGCTATACTACATTGTTGATGTCATCAATATCAAGAAGCCATTCATCCTATTCCAGTGGATGGGCATGAACGCGCTTATAGTGTATGTTCTTGCTGCTTGTGAGATCTTCCCTACACTTGTGCAAGGGTTCTATTGGAGATCACCTGAAAACAACCTGGTGGATTTGACTGAATCTCTGCTTCAGACAATCTTCCACTCCAAACGCTGGGGAACCTTGGCGTTCGTCGTCTTGGAGATCATCTTCTGGTGCCTGGCTGCTTGTTTCCTCCACATGAAAGGCATATACTTGAAACTGTAG</cdnaseq>

Protein Sequence

<aaseq>MDAAVVAIAGDGDADAGHRRPLLASADDDDEIRPYPASSPSPQHPAGAERKPRRVASLDVFRGLTVAMMILVDDAGGAWPGMNHSPWLGVTVADFVMPAFLFIIGVSAALVFKKTPNKTVATKKAAIRAIKLFILGVILQGGYIHGRHNLTYGIDLDHIRWLGVLQRIAIGYFLAAISEIWLVNNISVDSAISFVKKYFMEWIVAVMISALYVGLLLGLYVSNWEFKVQTSNSILTIPTPGNEIGMKMIQCGVRGSLGPPCNAVGFVDRVLLGENHLYKNPVYKRTKECSVNSPDYGPLPPNAPDWCLAPFDPEGLLSTLMAAVTCFVGLHFGHVLVHCKDHSPRMLLWLLASTVLTVSGFLLQLLGMPFSKPLYTVSYMLLTGGVSGFLLLLLYYIVDVINIKKPFILFQWMGMNALIVYVLAACEIFPTLVQGFYWRSPENNLVDLTESLLQTIFHSKRWGTLAFVVLEIIFWCLAACFLHMKGIYLKL</aaseq>

Gene Sequence

<dnaseqindica>1..201#303..440#1276..1357#1471..1547#1642..1748#2180..2318#3431..3547#3679..3770#3925..3991#4106..4184#4284..4375#4580..4723#4924..5064#ATGGACGCCGCCGTCGTCGCCATCGCCGGCGACGGGGACGCCGACGCCGGCCACCGCCGTCCTCTCCTCGCCTCCGCCGACGACGACGACGAGATCCGCCCCTACCCCGCATCATCCCCTTCGCCGCAGCACCCGGCGGGGGCTGAGCGGAAGCCGCGGCGGGTCGCCTCGCTCGACGTGTTCCGCGGCCTCACCGTCGCCGTGAGCCTCCTTCCTCGACCGGATTTCTCCCGACTGCGTGGTCGGGGATCCTCTCATTCTCGTGGTGACTGGGGGTTTGGTTTTTTTGGTTGGGGGCGCAGATGATGATACTGGTGGACGACGCCGGCGGGGCGTGGCCGGGGATGAACCACTCGCCGTGGCTCGGGGTGACGGTGGCCGACTTCGTCATGCCCGCCTTCCTCTTCATCATCGGCGTCTCCGCCGCCCTCGTCTTCAAGGTATACACCCCCCAACCCTAGTGCCCTCTCCTGCTTACCTGACGCCCAAACCCGAATTCTGCTACTTCAAGAAAAAGCTTTGATATGTAGTACTCCATCCGTTTCAGATTATAAGTCGTCTTGACTTTGCTACAGGTTTGATCAAGTTTGTAGAAAAAAGTAATAACATTTTCAACCCAAAACAAATATATTATGAAAATATATTCAACTATTGATTTAATGAAACTAATTTGGTGTTGTAAATATTACTATATTTGTTTTCAAACTCAGTTAAAATTGGAGTAGTTTGACTTTGACCAAAGTCAAAGCGACTTATAATCTGAAACATAGGGAGTATCAAGCAAATCAAAGGAACTTTGATGTGCCTGTGACTTGTAAAAATTGGCCCGTGTGTGTTGAACCTAGGTAATTTTGGTTTGGGGAATTTGTTGAGATACCCTATTGCTGACTAAGTTTCAGAGGATTTGTGAATACTCAGTTGTTAAGCCAATGAGGTAATGAGCATATCTGCTGTGCAAATCTTCTGAAACTTTGTGAGAATATAATAGGCTACCTGATTGCAATGCCAAAAAAATTCTGCAAACCTTTATGCCACAATCTTTTTATCCTGGTTACCTTTTCTACTTTAAATCTGGTATACCTTTTTTTGTTTCCAACTTCTGTTCCAATCTGCCAAGTGATGTAAGCATATAACAAAATTTAATGCCTATGTCATTGTGCTCCATCACTTGGAATGTGTGTGATTACTCATGATGTTGGTGCTCACTGCGTGACTTAAACCACTGGCTGCTTAGTTATAGAATAACATCTGACTATTGTGGATGATGCACAACAGAAAACACCAAACAAAACAGTGGCAACTAAGAAGGCTGCAATCAGGGCCATCAAACTTTTCATCTTGGGTGTAATTTTGCAAGGTTATACTTATCCCTGTGTTTCCTTGCCAACTATACCAGCAACATTTAGCTCCATATTTTGCCATTTCTTTTGGTCGGAGTTTTTCCTTTTTAAAATTATATCTTACTTGTAGGAGGATATATTCATGGCAGACACAATTTAACTTATGGCATTGATTTGGATCATATTCGATGGCTAGGTGTGCTGCAGGTAGTGTTTAAAAACAAAAGGAGAAGCTTTATCACATTTCCTCTTCGGCTTACTGAATGTTCGAAACGTTAACTTGTTGTTATACTTCTGGTAGAGGATAGCTATTGGATACTTTCTAGCGGCAATTTCAGAGATTTGGCTTGTCAACAATATTTCAGTGGATTCAGCTATATCATTTGTGAAGAAATACTTCATGGAGTGGTTAGTTAATAAGTGTAACAATTTACTATGGAAAGTTTCAGTTTTTGTTCAGCATTTGGAATTATGTAATCCAATCATTGTTTATACATTCTGATTACATTCTATGTTCATGTAAAGTGGTATTTGCTCTACAAACGTTCCATGATATGAAATAACATGTTTAGTTGTCCATCTAAAGAATGTTATCTGCATTAGTTGATTAATAGTCCTGAATTTGGGGGAGTTTTGGTAATTCTGGTCATTTTGATTGCTCGATCTGTTCATCTGCTAGAGGGTTAGGTAACTTTTTTCTGTACAGTTAAAAAAATTGCAATATTTGTAGTTTGGCTGTGCTTCATATGAGATTATAACTGAGAATTATTCTGAACTCAAGACATGGAAGATATACTAATATGGCCATACCATTTCTGACATTTGTTTATCGTTTGAAGGATTGTGGCCGTAATGATTTCAGCACTTTATGTTGGCTTGCTACTCGGCCTTTATGTTTCAAATTGGGAATTTAAAGTTCAAACTAGCAATTCAATCCTTACAATTCCAACTCCGGGCAACGAAATTGGAATGAAAATGGTAAGAAGAGAATATCCTGTTTAATCTAAACACTTTATTCTATTTGGATGGTATCCTGTGTGCTCAAGAATCGGATTGCTAGATGTACCATTTGTTTGCTTTTCATGTGATTTTGTTTCAATACTTGAAGCACATCATGATTCTGTATCTGTAGTGATATATTTGGTTGGATGAAACCTACTCAAGTTGCTGGAATGCAATATTTCAATCATGTCTAACTGAGCTTTATTCAGTAAATATACTTTGACCCCATTTATGCTGACTATTTTCCTTTTGACAAAAATGTTTTGATTGGGTGACAGACCCTTTTCGTATTTACACAGTTATATTTTTCAAAACTAGTTGATATGTTTGGTGACATTTTAAGATACATGAATTCACGGCCATCATATTTGTCCCATTGTTTCGTTCTCAGATGATTATCCAGAATTGATTTACCAGGAATAACCCAAGTCTTGATAAAAAAAATACTGGATCAGGCCAGTACTGCTTCCTGGCAAAGACTGGGGAAAAGAATTCCTGAACGGTTGCTAACTAAAACTCAACTTCAACCGAATTTTAATTGAAGAAGGTTCCTAGTTGGTTACCCTGGATTCAGGAATTCAAAATTGAATTGAATTTAGTATGTATATTAAGAAAATATCAGATTTTGTAAATCCTGATTCGTACAGTACTTCTGGAACCAGAACTCCAGAAGTTACTGGTGGATATGAAACCTTATGTTCAGATCAGATAAGTCAGCTTATCCAGTGTTGAGAGCTAGGTGTCGTGGAGTTTTTACTTGTGGGTTCCTTTACAGCATTTTGTGGTCCTAATCACCATATCTACCTTGTTGCAGTTACTAACCTGTTTAGTATGTATATTAAGAAAATATCGGATTTTGTATATCCTTATTCATAAAGTATTTCTGGAACCAAAACTCCATAAGTTACTGGTGGATATGAAACCTAGGTTGAATAACTGGTCAATTCATCCAGTGTTTGAAAGCTAATTGCTGTGGAGTCTTTACCTGTGGCTGTGGGTTCCTTTACAGCTTTTTGTGGTCCTAATCATCATATCTACATCGTTGCAGTTACTAACCTGTTTTGCTGGTTTTGTTTTTGGTGTTTCAGATCCAGTGTGGAGTTAGAGGTAGTCTTGGGCCACCTTGCAATGCAGTTGGATTTGTAGATCGAGTTTTACTTGGTGAAAATCACCTGTACAAGAACCCAGTCTATAAAAGGACTAAGGTCTTTTTTTCCTTAAGCAAACACATGATATTGATCTTTTCCCGATTCACTTGGATATCAAATAGCCATGTTCTTATAGGATACCAATTTGAAAAATACGCAAGATTAAATTCCTTTTATTTGCTCCATAGGAATGCAGTGTTAACTCTCCTGATTATGGACCACTTCCTCCAAATGCACCAGACTGGTGCCTGGCTCCATTTGATCCCGAGGGTTTGCTAAGGTGGTTATTTATATCTTTTATTTTTATTATTTGGTTCTTAAAATAATTGTACAACCGATTCAATCCTCAATTGACCTGACCAATGTTTATCAATTGAACCTTCCCATTTCCTGTAGGCAAACCAGAAAATAACCTCCCTTATTGGTTTTTACAGTACATTGATGGCTGCAGTGACTTGCTTTGTTGGATTGCATTTTGGACATGTTTTGGTTCATTGCAAGGTAGTGCCCATGAACTGCATACCTCCCTTTTAGAATCTCTTGAACCTTGAGCAAAATGGAATTTAAAAACACAATGATATTTCCAGACTTCTCTAACCTTTGCTTCTACCACAGGATCATTCACCTCGAATGCTATTATGGCTACTAGCTTCCACTGTGTTAACAGTCTCAGGATTTCTACTTCAGTTATTAGGTAATTATGTGTTTCGTGAGACTGCTGGCATTCAGCAATTTGTTGTTTTAATCAGAGCTTCCATTCCTCAATCTGATTCATGCATGTTTTGGTCATTAGGCATGCCTTTCAGCAAGCCTTTGTACACGGTGAGCTACATGCTACTAACCGGTGGGGTATCTGGATTCCTGCTGTTGTTGCTATACTACATTGTAAGTTTGAGTGCTCGAACAATCTCTGGAAACCGTACTGTGGGATAGTATGGTATCACTATATATGTAATCTTAATGACGGTTGATGTACCCATGTTAGTTTGTGGAAGCTTTACCTTTTCTGTTCGAACAAACTGTTATGAAGGCAGATAATATTACCTCATTAGTGGATTCTGATTCACAGAGCCTCTTTTTGTCATGCAGGTTGATGTCATCAATATCAAGAAGCCATTCATCCTATTCCAGTGGATGGGCATGAACGCGCTTATAGTGTATGTTCTTGCTGCTTGTGAGATCTTCCCTACACTTGTGCAAGGGTTCTATTGGAGATCACCTGAAAACAACCTGGTAAGCAACTTGCTGTGCTGTGCACCCTACCATATATGGGGTGGATTCTTTCATAGATGCAATATTTACTCAAGAATACCAAATTCCTCTTTTCCTGGAGCAATAACCTTACATGTTAGCTAACAGAAAATGATCTTGCAAAGCTCTACTACCTCTAGAGACTTGATTGATAGCGCGGAAAATTCTCCTTTTTATTTCAGGTGGATTTGACTGAATCTCTGCTTCAGACAATCTTCCACTCCAAACGCTGGGGAACCTTGGCGTTCGTCGTCTTGGAGATCATCTTCTGGTGCCTGGCTGCTTGTTTCCTCCACATGAAAGGCATATACTTGAAACTGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019212