BGIOSGA019220

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Revision as of 02:48, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019220| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019220, complete gene.| tag = P0676G0...")
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Gene Name

BGIOSGA019220

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019220, complete gene.

LocusTag

P0676G05.20

Ensembl Transcript ID

BGIOSGA019220-TA

Ensembl Protein ID

BGIOSGA019220-PA

Length

3192

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:3598394..3601585

Sequence Coding Region

3598394..3598772,3598901..3599041,3599478..3599599,3600065..3600334,3600421..3600551
,3600951..3601158,3601253..3601318,3601408..3601485,3601562..3601585

Genome Context

<gbrowseImage1> name=IndicaChromosome05:3598394..3601585 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:3598394..3601585 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCCCCCAAACGGAGGAAATCGGTGGCGGCCTCGAGCGGCGGTCCCAAATCGTCGCCGGCGGCGAGGTCGACTCGGTCCAAATCGAAGCCGGATTCCGATCTCGCCGAGCACGACGACAGTCCCAGATCGTCGTCCGGGAGGCTGACTCGCTCCAGAGCGAAGGTGTTGGAGGAGTCGGCGGGAGTGTCTTCGAGCAAGAAGAAGAGAAGGATCGAGGAGGAGTCGCCGGCGGCGACGACGACGACTTCGACGACGGCGACGACGGGTGTGATGCACAGGGAGGGGCATGGCACCTTGGCGTCCCGGCCACTCCCGCCGATCCACCCGCCGACGACACCCCGCGTCAGAAAAAGCTCCCACATCGTCCGGCTCGAAGTTGATCGACTTCAGAAGCTAACTCTCCGGCGCGATAAGAAAGATGATCCCTCCACCGCGGCCGCCTTGCCTACCCCCTCCGACAAGAACATGGTGTTGGGCATGTCTCGCTCAATTGTCCGCGTTTCATCTCCACCTTCTGAGGGAAAATTGATCTCTCCGCGCACCGGATTCGTCGTCAGTTGGGATGGAGCCACCAAGCGTGCTATGATCGTCACGCTCTCCACTTACTTCAAAAAGAAGCCGCATGAGCCCCAACCCGAGCTGCAGGTTCATCTTCCAGATAAGTCTATTGTGCAGGGACGGTTGATATTCATGAATCGCCACTACAATCTCTCCATCTTGGAGATCACGTCTGACCTACCATTGCAGGTCCCTGCTTTTGGGTCCACCCCAAAGTATGGCCAGAAAATTCTTGCCTTGTCTCGGGATGAAAATATGTCCCTGGTGGCGAGGCGTGGAGCAATCACGTGGTCGGATGGTTCTTTCATGTGGAGAAACCATTACATGTTTGTGGATTGTGATGTTCCTGAGGGTGGTGTAGGAGGGCCTGTGGTTGACAGCTGTGGTAGTTCCATTGCTATGGTATACAGAGCCGGCCCTGGTGCAGTTATCATTTCAATCTCAATTATTTGCACCTTCTTTGAGATGTGGAAGCAATTCAGCTGTGTTGCCCGCCCTGTGTTTGATGTGGATTTAAGAAGTGTGGAACTAGCTGGTGTGTCACTCCGGGAGGAGCTCTCTGTTAAACATAACATCAATGGTGGCTTTATGGTTAAACGCATAGCTGATGATTCTGCTCTTGAGCATCTTGGTGTTAGACAGGGTGACGTGATCTTTTTTGAGGACGAGTGCGGGACTAATTTGCCTGAGATCGAAGATTATCTCCTTTCTCTTGGTTGGAGATACCTGCAGGGGATGAAGTCGATGGTTCTCAAGTTGCTAGTACATGACATTGAAGGTCCATGTAAGGAGACAATTACCTTGCCCTTAGAGTTTTCTGTCGATTCAGGAAAGGTAGCCCGATGGAGGATGGCTTGA</cdnaseq>

Protein Sequence

<aaseq>MSPKRRKSVAASSGGPKSSPAARSTRSKSKPDSDLAEHDDSPRSSSGRLTRSRAKVLEESAGVSSSKKKRRIEEESPAATTTTSTTATTGVMHREGHGTLASRPLPPIHPPTTPRVRKSSHIVRLEVDRLQKLTLRRDKKDDPSTAAALPTPSDKNMVLGMSRSIVRVSSPPSEGKLISPRTGFVVSWDGATKRAMIVTLSTYFKKKPHEPQPELQVHLPDKSIVQGRLIFMNRHYNLSILEITSDLPLQVPAFGSTPKYGQKILALSRDENMSLVARRGAITWSDGSFMWRNHYMFVDCDVPEGGVGGPVVDSCGSSIAMVYRAGPGAVIISISIICTFFEMWKQFSCVARPVFDVDLRSVELAGVSLREELSVKHNINGGFMVKRIADDSALEHLGVRQGDVIFFEDECGTNLPEIEDYLLSLGWRYLQGMKSMVLKLLVHDIEGPCKETITLPLEFSVDSGKVARWRMA</aaseq>

Gene Sequence

<dnaseqindica>1..379#508..648#1085..1206#1672..1941#2028..2158#2558..2765#2860..2925#3015..3092#3169..3192#ATGTCCCCCAAACGGAGGAAATCGGTGGCGGCCTCGAGCGGCGGTCCCAAATCGTCGCCGGCGGCGAGGTCGACTCGGTCCAAATCGAAGCCGGATTCCGATCTCGCCGAGCACGACGACAGTCCCAGATCGTCGTCCGGGAGGCTGACTCGCTCCAGAGCGAAGGTGTTGGAGGAGTCGGCGGGAGTGTCTTCGAGCAAGAAGAAGAGAAGGATCGAGGAGGAGTCGCCGGCGGCGACGACGACGACTTCGACGACGGCGACGACGGGTGTGATGCACAGGGAGGGGCATGGCACCTTGGCGTCCCGGCCACTCCCGCCGATCCACCCGCCGACGACACCCCGCGTCAGAAAAAGCTCCCACATCGTCCGGCTCGAAGGTTTTTAGCTCTCGATCCGTCGTCATCGATCCTCTCCTCACCACTGTTAATTTCTTCTTCTTGTTTTAATTTCTTGTATACCTATTATTAACCATGTTAATTTCTCCCCATTTCTGCTTCTTCTTCAGTTGATCGACTTCAGAAGCTAACTCTCCGGCGCGATAAGAAAGATGATCCCTCCACCGCGGCCGCCTTGCCTACCCCCTCCGACAAGAACATGGTGTTGGGCATGTCTCGCTCAATTGTCCGCGTTTCATCTCCACCTTCTGGTAATTTACTCCATCCGTCCCAAAAATATGGTAACCTATGGACAACATCTTAGTACAAGTTTGGAGGCATATTCAGATTTTACTGCCTGAATCTACTGTATTTACTGCTAACTTAGCTACTAAGTGAGCCATGTGCTAGGCTGCTAGCATGTCACGTGTGGTTAATTGCGTTGTTTTACGCATTCCCTATCTAGCATTACATGAGAAAATCATGCTGCATCTCCACATGGGAATTACCGTGGATTTTGTGCTAAACTAGCTGCAGATGTTAAGGGAAAAGCCGGTGATATAAAAGAAAGCTACCGAGATAGACATGTGTAGTCCAACAACAAATGGAAATATGTGTTGTTTAGTGTATTTAGTAGCCCGATACAAAATATGTATTTATCGGCTCCTAGCTATGTAGCTACCTGCTAATCAACTGAATGTTTTTCAGAGGGAAAATTGATCTCTCCGCGCACCGGATTCGTCGTCAGTTGGGATGGAGCCACCAAGCGTGCTATGATCGTCACGCTCTCCACTTACTTCAAAAAGAAGCCGCATGAGCCCCAACCCGAGGTGCATGTCTTAGCTAATCCCCATGTTACCATCATCCGAGTTCCATAACTGTTCTTATTAAGTAGGGGCTAACCCAGTTGCTAAAAATGACTTTTCATGCCTGCCAATTTCTTTAATTTCTTGGTGCAAGTGTAGAACACCGATTTCCATTAGGCAATCCCCATGTTTCTATCATCCGAGTTCCATTACCATTTTTGTTAAGTATAGTATGGTCAAGTGATTGCTAACCGTAGCTGGGCTGCCGTGCATTTGCTTTGTGTGAATTTTAATGTGCCCTCTGATTTCAATTCTCAAACGTTATCATTGTCAAATTGATGGCCTTTTCTTGTATATCCTTAGCATGAGTTCCGTCTCTTGTGCTTAAGATGAGTAACCATTAACCTTTCTTTTTCTCGCATTGCCTTCTCTCTCTATCTTCCATTAACCTTTCTTTTTCTCGCATTGCCTTCTCTCTCTATCTTTCAGCTGCAGGTTCATCTTCCAGATAAGTCTATTGTGCAGGGACGGTTGATATTCATGAATCGCCACTACAATCTCTCCATCTTGGAGATCACGTCTGACCTACCATTGCAGGTCCCTGCTTTTGGGTCCACCCCAAAGTATGGCCAGAAAATTCTTGCCTTGTCTCGGGATGAAAATATGTCCCTGGTGGCGAGGCGTGGAGCAATCACGTGGTCGGATGGTTCTTTCATGTGGAGAAACCATTACATGTTTGTGGATTGTGATGTTCCTGAGGTACTGATACATTTACCTTTTCTTCACACTTGCTATTTGTTTTACCTTCTACTTAGTGGTATTTATTTATTTTTTAATTAATGCAGGGTGGTGTAGGAGGGCCTGTGGTTGACAGCTGTGGTAGTTCCATTGCTATGGTATACAGAGCCGGCCCTGGTGCAGTTATCATTTCAATCTCAATTATTTGCACCTTCTTTGAGATGTGGAAGCAATTCAGGTATATACTATTTTTCCATCAGTATTAAAATATACTACAGATTGAATCAAAATCGAGCAATTTCTATGTGGCACGTAAACCCACTAATCACGATATATTCTTATTAATTGAATGTTTATGGATAAATCTTTTATATCTATGTTATTAGCGATTTTAAAAGCCAATGCTGAAAAAACTACGAAAAAACACCTAAAATCAACTTAAAATTAAGTTTTAAAATTCAATTTGCTAAATAATAAACATGGCCTACAAAGTGGTTGGTGCGCCAACATGCGCGCTCATTTTCTCCTAATAGACTAAGTCAATCTTATCTGTAGCGCTCATTTTCTACTATAGACTAAATCCATCATATCTGTACGCTCATTGTCTACTAATTGACTGAATCCATCTTATTTGTAGCTGTGTTGCCCGCCCTGTGTTTGATGTGGATTTAAGAAGTGTGGAACTAGCTGGTGTGTCACTCCGGGAGGAGCTCTCTGTTAAACATAACATCAATGGTGGCTTTATGGTTAAACGCATAGCTGATGATTCTGCTCTTGAGCATCTTGGTGTTAGACAGGGTGACGTGATCTTTTTTGAGGACGAGTGCGGGACTAATTTGCCTGAGGTGAAATGAATTCTTGTCTCAAGTAATAGTTTAATATAAATCAATATTTGTCAAAAAATGTGTTGTGATTTCTATTTTTAAAATTCTGGAACAGATCGAAGATTATCTCCTTTCTCTTGGTTGGAGATACCTGCAGGGGATGAAGTCGATGGTTCTCAAGGTCTGATATTACACAATAACAAAAAATACCACTATTTTTTTAAAAAAAAGGGTAAAAGAATAATTAACAGAACTGCCTTTCTTGTGTAGTTGCTAGTACATGACATTGAAGGTCCATGTAAGGAGACAATTACCTTGCCCTTAGAGTTTTCTGTCGATTCAGGAAAGGTAAACTTCTCTAATCTATTGTACAATTGCCCATGTTTGCTTGTTTTAATCCATTGACAAATGTGTTGAATTTTAGGTAGCCCGATGGAGGATGGCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019220

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA019220&oldid=47976"