BGIOSGA019228

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Revision as of 02:48, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019228| Description = Dihydrolipoyl dehydrogenase| Definition = Oryza sativa Indica Group BGIOSGA019228, complete gene.| tag = P0554D10.2| ...")
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Gene Name

BGIOSGA019228

Description

Dihydrolipoyl dehydrogenase

Definition

Oryza sativa Indica Group BGIOSGA019228, complete gene.

LocusTag

P0554D10.2

Ensembl Transcript ID

BGIOSGA019228-TA

Ensembl Protein ID

BGIOSGA019228-PA

Length

3175

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:3711241..3714415

Sequence Coding Region

3711241..3711498,3713165..3714415

Genome Context

<gbrowseImage1> name=IndicaChromosome05:3711241..3714415 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:3711241..3714415 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGATGGCGAGCTTGGCGAGGAGGCGCGCGGCGGAGGCGGCGCTGCTGCGGCGGGCGCCGGCGGCGGCGTGGGCGTGGAGGGGGTACGCGGCGGCGGCGGCGGGGGAGGAGAGCGACGTCGTGGTGATCGGCGGCGGGCCGGGCGGGTACGTGGCCGCCATCAAGGCGGCGCAGCTAGGGCTCAAGACCACCTGCATCGAGAAGAGGGGAACGCTCGGGGGCACCTGCCTCAACGTCGGCTGCATCCCCTCCAAGGCTCTCCTGCATTCGTCGCATATGTACCATGAGGCCAAGGCTTCTTTTGCACACCATGGTATCAAATTCTCAAATCTTGAAATAGATTTGCCTGCCATGATGTCACAGAAAGACAAAGCAGTTGCTGGGCTGACTAAAGGGATTGAAGGCCTGTTCAAGAAGAACAAGGTTGAGTATGTCAAAGGATTTGGAAAGTTTGTGTCCCCTTCAGAGGTATCTGTTGACTTGCTCGATGGTGGTAGCACTACTGTTAAAGGGAAGAACATAATCATTGCCACTGGCTCAGATGTGAAATCACTCCCTGGAGTTACAATAGATGAGAAGAAGATCGTGTCATCTACTGGTGCTCTTGCTCTTTCAGAAATACCAAAGAAGTTGGTGGTTATTGGAGCTGGATACATTGGTTTAGAGATGGGTTCTGTCTGGAACAGGCTAGGGTCTGAGGTCACTGTCGTTGAATTCGCTTCTGACATTGTCCCGTCAATGGATGGAGAGATTAGGAAGCAGTTCCAGCGTATGCTGGAGAAGCAGAAAATGAAGTTCATGCTTAAGACAAAAGTTGTTGGGGTTGATACCTCTGGGAGTGGTGTCAAGTTAACTGTGGAGCCTGCAGCTGGTGGAGAGCAGAGTGTTCTTGAGTGTGATATTGTTCTTGTATCTGCTGGCAGAGTACCATACACCTCTGGTCTTGGATTGAACGCCCTTGGTGTTGAGACTGACAAGGGTGGAAGAATCCTTGTCGACAAGCGCTTTATGACAAATGTTAAGGGTGTTTATGCGATTGGAGATGCGATCCCTGGACCCATGCTTGCACATAAAGCTGAAGAAGATGGTGTTGCCTGTGTTGAATTCATCGCAGGTAAAGAAGGTCACGTAGATTATGACACTGTACCTGGAGTGGTGTACACACACCCAGAGGTGGCTTCTGTTGGGAAGACGGAAGAACAGGTCAAGGCATCAGGAGTGGCCTACCAGGTTGGGAAGTTCCCCCTGTTGGCCAACAGCCGTGCAAAGGCAATTGATGATGCTGAAGGGTTGGTCAAGGTAGTGGCTGAGAAGGAGACCGATAGAATCCTCGGTGTACATATAATGGCCCCTAATGCAGGTGAGATAATCCATGAGGCGGTGCTTGCACTTCAGTATGGAGCATCTAGTGAGGATATTGCACGGACATGCCATGCGCATCCAACAGTGAGCGAAGCCCTGAAGGAGGCTTGCCTACAGACCTACCTGAAGGCGATTCACATTTAA</cdnaseq>

Protein Sequence

<aaseq>MAMASLARRRAAEAALLRRAPAAAWAWRGYAAAAAGEESDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGTLGGTCLNVGCIPSKALLHSSHMYHEAKASFAHHGIKFSNLEIDLPAMMSQKDKAVAGLTKGIEGLFKKNKVEYVKGFGKFVSPSEVSVDLLDGGSTTVKGKNIIIATGSDVKSLPGVTIDEKKIVSSTGALALSEIPKKLVVIGAGYIGLEMGSVWNRLGSEVTVVEFASDIVPSMDGEIRKQFQRMLEKQKMKFMLKTKVVGVDTSGSGVKLTVEPAAGGEQSVLECDIVLVSAGRVPYTSGLGLNALGVETDKGGRILVDKRFMTNVKGVYAIGDAIPGPMLAHKAEEDGVACVEFIAGKEGHVDYDTVPGVVYTHPEVASVGKTEEQVKASGVAYQVGKFPLLANSRAKAIDDAEGLVKVVAEKETDRILGVHIMAPNAGEIIHEAVLALQYGASSEDIARTCHAHPTVSEALKEACLQTYLKAIHI</aaseq>

Gene Sequence

<dnaseqindica>1..258#1925..3175#ATGGCGATGGCGAGCTTGGCGAGGAGGCGCGCGGCGGAGGCGGCGCTGCTGCGGCGGGCGCCGGCGGCGGCGTGGGCGTGGAGGGGGTACGCGGCGGCGGCGGCGGGGGAGGAGAGCGACGTCGTGGTGATCGGCGGCGGGCCGGGCGGGTACGTGGCCGCCATCAAGGCGGCGCAGCTAGGGCTCAAGACCACCTGCATCGAGAAGAGGGGAACGCTCGGGGGCACCTGCCTCAACGTCGGCTGCATCCCCTCCAAGGTATCGCCCCCTCCCTCCCGCCCCGTCTCCGCGCCGCGATCTGGGATGGATGGCTGCGCGTTCCCCGCTGTTAGCTCTCGGAGAGCTCGTAGATCCGTGCGAATTCGTACGACGAATTTGGGCGTTAGGGTTTGCGTTGCGCGGGTGTTTAGGATGTAGTTGTTTGATACGTTTCGGGGTTTGCAAAATTTTGATTTATCCATGTGAATGTCAGAGAATTGGGACCTGCTCAACAAGCTATTTGGGGGGTGTGGTGATGTGAATTTTATTATGGCCCCCATCGGTTGGGCATATATGCGAATTATACGCCTTACAGCGTATTAGCAAAAGAATAATGTTTTGTGGGTAAAACTATAGATATGAGATATGTTTTTAGCGATTTAAAAGCTAATGCTGAAAAATAAACTTCGATGAAAAAACTTTAAAATTAAGCCTTAATATTCAAATTCTTGGCAGCGGCTGATTTCTTATAATGAAAACGATGGGGGCCTATGGTTCCTGCTCTTCATGCCAGATTGTCAGTTCAGTGATGCGAATTTTGAGTCTTCAAGTTGTGCTAGGAATTTGGAACCCGCTGATAATGTTATCAGTGCTATTTGCAGCTGGGTTTTATATTGAATTGTCTGAAATGTGTGGATTAGTTACAGTCAGTTCCTTTTCTTCTTTGCTATTATTGGTTAGGAGGTGATGAATCATTTCGACCCATTCTATTTAGCTGTGCCATCGATTTATTATGAATTACGAAGCACAATGGGGGTAATATGATGCCGTAGGCCTGAGTTTTTATCAGTGGGTCAACTTTCTGATATCTTTTAGAGAAAATTGCGAATATCATTGCCATTTTATAGATAAGAGCTTTGAGTAATCTGAGGTTGGTAATCTCATTGTTTGCTCTACACTTGTTCTGCTAGTGTGCATAAATTTGCACCTGTCTTCATTAGCTAGTCATCATTGAGCATGTAGTTGGAGGTTTCATTATTAGATCTTTATTGCTTTAGTTCTGAGGTCCATGGTTGGGGCCAGGTCTGTCATGACAAAGGGATTTAACCTACTTGATCCAACACAAAAATTGGAATATTTTTGGTGCTCTAATGAAGCTAGGGATGGATAACTGGTCTCGAAATTTGGTCTCGAATGCTCATACACTATTTATTAGCCGATATAATGCCACATTTTATGATGTTAGTCTTTTCATATGGGGCCAGAAATATTAATTGAATATCGAGAAGGTAGATTCGGTATTTTGCTCTTTAAGAGTTTCAGCTTATGGCTTCAGTTTTTCTCATCTATAGTTGCCACTTTCTATTCTTTACTCTTGTTTATGGTTCAACTCTAGATAAAACACTATGTACTTCCTTTGAACTGTACTATGGTTATCCTTCTGGAATGCAACTTTAGTTGAACATTAACATTTTTGTTGATTTCATACATGCTGTATCTTCACGCATGCTTGTGAAATTGGTCATGTTAACCATGCTGAAGTAGATAGATATACCAATAAATTCTTGTTCAAATGCTACTGCATACCCTCCTGAAGTACCAATTTTGTACTTAGCTTTTGCAGTTATGTATTTGTAGCTGGCTTATTTGAAAGAATGCAAATTGCAAGTGCATCATTTCGATGGTTATTGCATTGCATCTTATTTGTTTTCTTTTATCATTTCAGGCTCTCCTGCATTCGTCGCATATGTACCATGAGGCCAAGGCTTCTTTTGCACACCATGGTATCAAATTCTCAAATCTTGAAATAGATTTGCCTGCCATGATGTCACAGAAAGACAAAGCAGTTGCTGGGCTGACTAAAGGGATTGAAGGCCTGTTCAAGAAGAACAAGGTTGAGTATGTCAAAGGATTTGGAAAGTTTGTGTCCCCTTCAGAGGTATCTGTTGACTTGCTCGATGGTGGTAGCACTACTGTTAAAGGGAAGAACATAATCATTGCCACTGGCTCAGATGTGAAATCACTCCCTGGAGTTACAATAGATGAGAAGAAGATCGTGTCATCTACTGGTGCTCTTGCTCTTTCAGAAATACCAAAGAAGTTGGTGGTTATTGGAGCTGGATACATTGGTTTAGAGATGGGTTCTGTCTGGAACAGGCTAGGGTCTGAGGTCACTGTCGTTGAATTCGCTTCTGACATTGTCCCGTCAATGGATGGAGAGATTAGGAAGCAGTTCCAGCGTATGCTGGAGAAGCAGAAAATGAAGTTCATGCTTAAGACAAAAGTTGTTGGGGTTGATACCTCTGGGAGTGGTGTCAAGTTAACTGTGGAGCCTGCAGCTGGTGGAGAGCAGAGTGTTCTTGAGTGTGATATTGTTCTTGTATCTGCTGGCAGAGTACCATACACCTCTGGTCTTGGATTGAACGCCCTTGGTGTTGAGACTGACAAGGGTGGAAGAATCCTTGTCGACAAGCGCTTTATGACAAATGTTAAGGGTGTTTATGCGATTGGAGATGCGATCCCTGGACCCATGCTTGCACATAAAGCTGAAGAAGATGGTGTTGCCTGTGTTGAATTCATCGCAGGTAAAGAAGGTCACGTAGATTATGACACTGTACCTGGAGTGGTGTACACACACCCAGAGGTGGCTTCTGTTGGGAAGACGGAAGAACAGGTCAAGGCATCAGGAGTGGCCTACCAGGTTGGGAAGTTCCCCCTGTTGGCCAACAGCCGTGCAAAGGCAATTGATGATGCTGAAGGGTTGGTCAAGGTAGTGGCTGAGAAGGAGACCGATAGAATCCTCGGTGTACATATAATGGCCCCTAATGCAGGTGAGATAATCCATGAGGCGGTGCTTGCACTTCAGTATGGAGCATCTAGTGAGGATATTGCACGGACATGCCATGCGCATCCAACAGTGAGCGAAGCCCTGAAGGAGGCTTGCCTACAGACCTACCTGAAGGCGATTCACATTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019228