BGIOSGA019252

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Revision as of 02:48, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019252| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019252, complete gene.| tag = OS05G01...")
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Gene Name

BGIOSGA019252

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019252, complete gene.

LocusTag

OS05G0169600

Ensembl Transcript ID

BGIOSGA019252-TA

Ensembl Protein ID

BGIOSGA019252-PA

Length

3499

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:4310624..4314122

Sequence Coding Region

4310624..4311855,4311998..4312984,4313041..4313480,4313611..4314122

Genome Context

<gbrowseImage1> name=IndicaChromosome05:4310624..4314122 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:4310624..4314122 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCGAGGTCGCCGGCGGCGGCGGCGGCGGCGATGGTCATGGCGTGTGTGGTCGTGGTGCTGCGCGTGAGCTGCGTGCTCGCCGTGGACGAGCAGGGCGCCGCGCTGCTCGCGTGGAAGGCGACGCTGCGCGGCGACGGCGGCGCGCTGGCGGACTGGAAGGCCGGGGACGCGTCGCCGTGCCGGTGGACCGGCGTGACGTGCAATGCCGACGGCGGCGTGACGGAGCTGAGCCTGGAGTTCGTCGACCTGTTCGGCGGCGTGCCGGGCAACCTCGCCGCCGCCGTGGGGCGCACGCTGACACGGCTGGTGCTCACCGGCGCGAACCTGACGGGCCCGATCCCGCCGGAGCTCGGCGAGCTGCCGGCGCTGGCGCACCTCGACCTCAGCAACAATGCCCTCACGGGGACGATACCGGCGGCGCTCTGCCGGCCGGGGAGCAAGCTGGAGACCCTCTACCTCAACTCCAACCGCCTCGAGGGCGCCATCCCTGACACCATCGGCAACCTCACCTCGCTCCGGGAGCTCATCGTCTACGACAACCAGCTCGCCGGCAAGATCCCGGCGTCCATCGGCAAGATGTCCAGCCTCGAGGTGCTCCGCGGCGGCGGCAACAAGAACCTCCAAGGCGCGCTCCCGGCGGAGATCGGCGATTGCTCCAGCCTCACCATGATCGGCCTCGCCGAGACCAGCATCACCGGCCCGCTCCCGGCGAGCCTCGGCCGGCTCAAGAACCTCACCACGCTGGCCATCTACACGGCGCTCCTCTCCGGCCCGATCCCGCCGGAGCTCGGCCGGTGCGGGTGCCTCGAGAACATCTACCTCTACGAGAACGCGCTGTCCGGCTCCATCCCGGCGCAGCTCGGCGGGCTCGGGAAGCTCAGGAACCTGCTGCTATGGCAGAACCAGCTGGTCGGCGTCATCCCGCCGGAGCTCGGCTCGTGCGCCGCGCTCGCCGTCGTCGACCTGTCGCTCAACGGCCTCACCGGCCACATCCCGCCGTCGTTCGGCAACCTCTCGTCGCTGCAGGAGCTCCAGCTCAGCGTCAACAAGCTCTCCGGCGCCGTCCCGCCGGAGCTCGCCCGGTGCAGCAACCTCACCGACCTCGAGCTCGACAACAACCAGCTCACCGGCGGCATCCCGGCGGAGCTCGGCCGCCTCCCGGCGCTGCGCATGCTCTACCTCTGGGCCAACCAGCTCACCGGCAGCATCCCACCGGAGCTCGGCCGCTGCGCGGCGCTCGTAAGGTTCCGGGCGAGCGGCAACCACATCGCCGGCGCGATACCGCCGGAGATCGGCATGCTCGGGAACCTCAGCTTCCTTGACCTCGCGTCAAACCGGCTCGCCGGCGCGCTCCCGCCGGAGATGTCGGGGTGCCGGAACCTCACGTTCGTCGACCTCCACGACAACGCCATCTCCGGCGAGCTGCCGCCGAGGCTGTTCCGGGACTGGCTCTCGCTCCAGTACCTCGACCTCTCCGACAACGTCATCGCCGGCGGAATCCCGCCGGAGATTGGCATGCTGACGTCTCTGACTAAGCTGGTTCTCGGCGGCAACCGGCTGTCCGGGCCGATGCCGCCGGAGATTGGCTCGTGCACGCGCCTCCAGCTCCTCGACGTCGGCGGCAACTCGCTCTCCGGCCATGTGCCGGGGAGCATCGGCAAGATTCCGGGGCTGGAGATTGCGCTTAACCTCAGCTGCAACGGCTTCTCCGGCGCGATTCCGGCGGAGTTCGCCGGGCTCGTGAGGCTCGGGGTGCTCGACGTGTCGCGGAACCAGCTATCCGGCGACCTCCAGCCGCTGTCCGCGCTCCAGAACCTCGTGGCGCTCAACGTCTCGTTCAACGGCTTCACCGGCCGGCTGCCGGAGACGGCGTTCTTCGCGAGGCTGCCGACGAGCGACGTCGAGGGCAACCCGGCGCTGTGCCTCTCGCGGTGCTCCGGCGACGCCAGCGAGCGCGAGGTGGAGGCGCGCCGCGCCGCCCGCGTCGCGATGGCGGTGCTGCTCTCGGCCCTCGTCGTCCTCCTCGCGGCCGCGGCGCTCGTCCTCTTCGGGTGGCACCGCCGCGGCGGCGGCGCCCGCGGCGGCGAGGACAAGGACGGCGAGATGTCGCCGCCGTGGGACGTGACGCTGTACCAGAAGCTGGAGATCGGCGTGTCCGACGTGGCACGCAGCCTCACGCCGGCGAACGTGATCGGCACGGGTGGTCCGGCGAGGTCGTGCGACGAGGCGTCCATCGAGGCGTTCGCCGGCGAGGTCAGCGTGCTCCCGCGCGTCCGCCACCGCAACATCGTCCGGCTGCTGGGCTGGGCGGCGAACCGCCGGACGCGCCTCCTCTTCTACGACTACCTCCCGAACGGCACCCTCGGCGGCCTGCTCCACGGCGGCGCGATGGGCGGCGGCGCCACCACCACCGCCGCCGTGGTGGAGTGGGAGGTTCGCCTCGCCATCGCCGTCGGCGTGGCCGAGGGCCTCACCTACCTCCACCATGACTGCGTTCCAGGGATCATCCACCGCGACGTCAAGGCCGACAACATCCTCCTCGCCGACCGCTACGAGGCGTGCCTCGCCGACTTCGGCCTCGCCCGTGTCGCCGACGACGGTGCCAGCTCATCGCCTCCGCCGTTCGCCGGATCCTACGGCTACATCGCTCCCGAGTATGGATGCATGACCAAGATCACAACCAAGAGTGACGTGTACAGCTTCGGTGTGGTGCTACTCGAGATGATCACCGGGCGCCGCCCACTGGACCCGGCATTCGGGGAGGGACAAAGCGTGGTGCAATGGGTGCGCGACCACCTTTGCCGGAAGCGAGACCCGGCGGAGATCATCGATGTGAGGTTGCAGGGCCGGCCCGATACCCAGGTCCAAGAGATGCTGCAAGCTCTCGGCATGGCATTGCTATGCGCAAGCCCACGACCTGAGGATCGACCGACCATGAAGGATGTGGCGGCGTTGCTACGTGGCATTCGACACGATGATGGCGTCGAGGCAAGAAAAGCCGGCAATGGAGTTGGTACTGATGCAGAGACAAGGAAGCGGGCTGACCCGAGACAGCCCATTTCACCGACCAAACTCATGGCCCTTGCTAGACCGGCCCAGGCCCAAGCCCAACTCCAAGCCCGTGCTAATTCCGGTTCCTTGGGCCTGCTCAACGATCAGGAGTGA</cdnaseq>

Protein Sequence

<aaseq>MASRSPAAAAAAMVMACVVVVLRVSCVLAVDEQGAALLAWKATLRGDGGALADWKAGDASPCRWTGVTCNADGGVTELSLEFVDLFGGVPGNLAAAVGRTLTRLVLTGANLTGPIPPELGELPALAHLDLSNNALTGTIPAALCRPGSKLETLYLNSNRLEGAIPDTIGNLTSLRELIVYDNQLAGKIPASIGKMSSLEVLRGGGNKNLQGALPAEIGDCSSLTMIGLAETSITGPLPASLGRLKNLTTLAIYTALLSGPIPPELGRCGCLENIYLYENALSGSIPAQLGGLGKLRNLLLWQNQLVGVIPPELGSCAALAVVDLSLNGLTGHIPPSFGNLSSLQELQLSVNKLSGAVPPELARCSNLTDLELDNNQLTGGIPAELGRLPALRMLYLWANQLTGSIPPELGRCAALVRFRASGNHIAGAIPPEIGMLGNLSFLDLASNRLAGALPPEMSGCRNLTFVDLHDNAISGELPPRLFRDWLSLQYLDLSDNVIAGGIPPEIGMLTSLTKLVLGGNRLSGPMPPEIGSCTRLQLLDVGGNSLSGHVPGSIGKIPGLEIALNLSCNGFSGAIPAEFAGLVRLGVLDVSRNQLSGDLQPLSALQNLVALNVSFNGFTGRLPETAFFARLPTSDVEGNPALCLSRCSGDASEREVEARRAARVAMAVLLSALVVLLAAAALVLFGWHRRGGGARGGEDKDGEMSPPWDVTLYQKLEIGVSDVARSLTPANVIGTGGPARSCDEASIEAFAGEVSVLPRVRHRNIVRLLGWAANRRTRLLFYDYLPNGTLGGLLHGGAMGGGATTTAAVVEWEVRLAIAVGVAEGLTYLHHDCVPGIIHRDVKADNILLADRYEACLADFGLARVADDGASSSPPPFAGSYGYIAPEYGCMTKITTKSDVYSFGVVLLEMITGRRPLDPAFGEGQSVVQWVRDHLCRKRDPAEIIDVRLQGRPDTQVQEMLQALGMALLCASPRPEDRPTMKDVAALLRGIRHDDGVEARKAGNGVGTDAETRKRADPRQPISPTKLMALARPAQAQAQLQARANSGSLGLLNDQE</aaseq>

Gene Sequence

<dnaseqindica>1..1232#1375..2361#2418..2857#2988..3499#ATGGCGTCGAGGTCGCCGGCGGCGGCGGCGGCGGCGATGGTCATGGCGTGTGTGGTCGTGGTGCTGCGCGTGAGCTGCGTGCTCGCCGTGGACGAGCAGGGCGCCGCGCTGCTCGCGTGGAAGGCGACGCTGCGCGGCGACGGCGGCGCGCTGGCGGACTGGAAGGCCGGGGACGCGTCGCCGTGCCGGTGGACCGGCGTGACGTGCAATGCCGACGGCGGCGTGACGGAGCTGAGCCTGGAGTTCGTCGACCTGTTCGGCGGCGTGCCGGGCAACCTCGCCGCCGCCGTGGGGCGCACGCTGACACGGCTGGTGCTCACCGGCGCGAACCTGACGGGCCCGATCCCGCCGGAGCTCGGCGAGCTGCCGGCGCTGGCGCACCTCGACCTCAGCAACAATGCCCTCACGGGGACGATACCGGCGGCGCTCTGCCGGCCGGGGAGCAAGCTGGAGACCCTCTACCTCAACTCCAACCGCCTCGAGGGCGCCATCCCTGACACCATCGGCAACCTCACCTCGCTCCGGGAGCTCATCGTCTACGACAACCAGCTCGCCGGCAAGATCCCGGCGTCCATCGGCAAGATGTCCAGCCTCGAGGTGCTCCGCGGCGGCGGCAACAAGAACCTCCAAGGCGCGCTCCCGGCGGAGATCGGCGATTGCTCCAGCCTCACCATGATCGGCCTCGCCGAGACCAGCATCACCGGCCCGCTCCCGGCGAGCCTCGGCCGGCTCAAGAACCTCACCACGCTGGCCATCTACACGGCGCTCCTCTCCGGCCCGATCCCGCCGGAGCTCGGCCGGTGCGGGTGCCTCGAGAACATCTACCTCTACGAGAACGCGCTGTCCGGCTCCATCCCGGCGCAGCTCGGCGGGCTCGGGAAGCTCAGGAACCTGCTGCTATGGCAGAACCAGCTGGTCGGCGTCATCCCGCCGGAGCTCGGCTCGTGCGCCGCGCTCGCCGTCGTCGACCTGTCGCTCAACGGCCTCACCGGCCACATCCCGCCGTCGTTCGGCAACCTCTCGTCGCTGCAGGAGCTCCAGCTCAGCGTCAACAAGCTCTCCGGCGCCGTCCCGCCGGAGCTCGCCCGGTGCAGCAACCTCACCGACCTCGAGCTCGACAACAACCAGCTCACCGGCGGCATCCCGGCGGAGCTCGGCCGCCTCCCGGCGCTGCGCATGCTCTACCTCTGGGCCAACCAGCTCACCGGCAGCATCCCACCGGAGCTCGGCCGGTGCGGGAGCCTCGAGGCGCTCGACCTCTCCAGCAACGCGCTCACCGGCGCCATCCCGCGCTCCCTCTTCCGGCTGCGCGGCTGTCCAAGCTGCTGCTCTCAACAACAACCTCTCCGGCGAGCTCCCGCCGGAGATCGGCAGCTGCGCGGCGCTCGTAAGGTTCCGGGCGAGCGGCAACCACATCGCCGGCGCGATACCGCCGGAGATCGGCATGCTCGGGAACCTCAGCTTCCTTGACCTCGCGTCAAACCGGCTCGCCGGCGCGCTCCCGCCGGAGATGTCGGGGTGCCGGAACCTCACGTTCGTCGACCTCCACGACAACGCCATCTCCGGCGAGCTGCCGCCGAGGCTGTTCCGGGACTGGCTCTCGCTCCAGTACCTCGACCTCTCCGACAACGTCATCGCCGGCGGAATCCCGCCGGAGATTGGCATGCTGACGTCTCTGACTAAGCTGGTTCTCGGCGGCAACCGGCTGTCCGGGCCGATGCCGCCGGAGATTGGCTCGTGCACGCGCCTCCAGCTCCTCGACGTCGGCGGCAACTCGCTCTCCGGCCATGTGCCGGGGAGCATCGGCAAGATTCCGGGGCTGGAGATTGCGCTTAACCTCAGCTGCAACGGCTTCTCCGGCGCGATTCCGGCGGAGTTCGCCGGGCTCGTGAGGCTCGGGGTGCTCGACGTGTCGCGGAACCAGCTATCCGGCGACCTCCAGCCGCTGTCCGCGCTCCAGAACCTCGTGGCGCTCAACGTCTCGTTCAACGGCTTCACCGGCCGGCTGCCGGAGACGGCGTTCTTCGCGAGGCTGCCGACGAGCGACGTCGAGGGCAACCCGGCGCTGTGCCTCTCGCGGTGCTCCGGCGACGCCAGCGAGCGCGAGGTGGAGGCGCGCCGCGCCGCCCGCGTCGCGATGGCGGTGCTGCTCTCGGCCCTCGTCGTCCTCCTCGCGGCCGCGGCGCTCGTCCTCTTCGGGTGGCACCGCCGCGGCGGCGGCGCCCGCGGCGGCGAGGACAAGGACGGCGAGATGTCGCCGCCGTGGGACGTGACGCTGTACCAGAAGCTGGAGATCGGCGTGTCCGACGTGGCACGCAGCCTCACGCCGGCGAACGTGATCGGCACGGGTGGTCCGGCGAGGTGTACCGCGCGAGCATGCCGTCGTCGGGCGTCACCATCGCCGTCAAGAAGTTCAGGTCGTGCGACGAGGCGTCCATCGAGGCGTTCGCCGGCGAGGTCAGCGTGCTCCCGCGCGTCCGCCACCGCAACATCGTCCGGCTGCTGGGCTGGGCGGCGAACCGCCGGACGCGCCTCCTCTTCTACGACTACCTCCCGAACGGCACCCTCGGCGGCCTGCTCCACGGCGGCGCGATGGGCGGCGGCGCCACCACCACCGCCGCCGTGGTGGAGTGGGAGGTTCGCCTCGCCATCGCCGTCGGCGTGGCCGAGGGCCTCACCTACCTCCACCATGACTGCGTTCCAGGGATCATCCACCGCGACGTCAAGGCCGACAACATCCTCCTCGCCGACCGCTACGAGGCGTGCCTCGCCGACTTCGGCCTCGCCCGTGTCGCCGACGACGGTGCCAGCTCATCGCCTCCGCCGTTCGCCGGATCCTACGGCTACATCGCTCCCGGTAAGAGCCTTTTCTCACACTCACACACATTCACCAGTTCAAACAAAATTTCAGCAGTTTAATTGAATTTGTTTTAAAAAGAAAAGCACAAGATTAATCAATGGCTGATATTTGATCTTGATCAACGCAGAGTATGGATGCATGACCAAGATCACAACCAAGAGTGACGTGTACAGCTTCGGTGTGGTGCTACTCGAGATGATCACCGGGCGCCGCCCACTGGACCCGGCATTCGGGGAGGGACAAAGCGTGGTGCAATGGGTGCGCGACCACCTTTGCCGGAAGCGAGACCCGGCGGAGATCATCGATGTGAGGTTGCAGGGCCGGCCCGATACCCAGGTCCAAGAGATGCTGCAAGCTCTCGGCATGGCATTGCTATGCGCAAGCCCACGACCTGAGGATCGACCGACCATGAAGGATGTGGCGGCGTTGCTACGTGGCATTCGACACGATGATGGCGTCGAGGCAAGAAAAGCCGGCAATGGAGTTGGTACTGATGCAGAGACAAGGAAGCGGGCTGACCCGAGACAGCCCATTTCACCGACCAAACTCATGGCCCTTGCTAGACCGGCCCAGGCCCAAGCCCAACTCCAAGCCCGTGCTAATTCCGGTTCCTTGGGCCTGCTCAACGATCAGGAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019252