BGIOSGA019255

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Revision as of 02:48, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019255| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019255, complete gene.| tag = OS05G01...")
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Gene Name

BGIOSGA019255

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019255, complete gene.

LocusTag

OS05G0170300

Ensembl Transcript ID

BGIOSGA019255-TA

Ensembl Protein ID

BGIOSGA019255-PA

Length

4747

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:4347421..4352167

Sequence Coding Region

4347421..4347512,4348008..4348117,4348532..4348569,4349027..4349125,4349174..4352167

Genome Context

<gbrowseImage1> name=IndicaChromosome05:4347421..4352167 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:4347421..4352167 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGCAAGAAGGAAAGGGGCGCTTTATTCTACACCCACATTTGTCCTTTGACTCATGTCCCATCCGGATCTCAAATCCTGTGGTTAGGCAGTTCAACTGAAGGAAACAAAGAAAAGTGCGAGCTGGTGCGTCCCATGCATGCTGCTGCTGCAGTTCTGCCTGTGATGGGGGCCTGGATATGCAACTATCGTGGTAGTTACTGGTCAGCAAAAATATCGACTTCGGAATCGATGAACAGGCTTAGGCTCCTACTTTGTGCACATGATGAGCCTCCAAACCTCAGCTATGGAGTTCATAGTTTCATGCTCACCTTGTCATCTCCAGAGTTCCAGCATCCTTTGATGGTATCATTGGTCTTAGCAATGGCTGGCAAGCTGATCAGCTCCTCCATTGTTCTTGCTCTTCTACCTCTGTTCTGTGGCATCCTGCTTGCACCATCATGTGAAGCAGCCACAGTAGACACAACATCTGCCACTCTCCTGCAAGTGAAGTCAGGTTTCACTGACCCTAATGGCGTCCTCTCCGGCTGGTCGCCGGAGGCCGACGTGTGCTCATGGCACGGCGTGACGTGCCTGACAGGGGAGGGCATTGTCACCGGCCTCAACCTGTCGGGGTACGGCCTGTCCGGCACGATATCGCCGGCGATAGCCGGCCTTGTATCCGTCGAGTCCATTGATCTGTCGTCAAATTCCCTCACCGGCGCAATCCCGCCGGAGCTCGGGACGATGAAGAGCCTGAAGACGCTGCTGCTTCACTCCAACCTCCTCACCGGCGCCATCCCACCGGAGCTCGGCGGCCTCAAGAACCTGAAGTTACTGAGGATCGGCAACAACCCGCTGCGCGGCGAGATACCACCGGAGCTCGGCGACTGCTCGGAGCTGGAGACGATCGGCATGGCCTACTGCCAGCTGATCGGCGCCATCCCCCACCAGATTGGCAACCTGAAGCAGCTTCAGCAGCTGGCCCTGGACAACAACACCCTCACCGGCGGCCTCCCGGAGCAGCTCGCCGGCTGTGCAAACCTGCGTGTCCTCTCGGTGGCTGACAACAAGCTGGATGGCGTCATACCTTCCTCCATTGGCGGCCTGAGCTCTCTCCAGTCTCTGAACCTTGCAAACAACCAGTTCTCCGGCGTGATTCCGCCGGAGATCGGTAACCTCTCCGGCTTGACATACCTGAACTTACTCGGCAACCGCCTCACCGGCGGCATCCCGGAAGAACTGAACCGGCTGAGCCAGCTGCAGGTTGTGGATTTGTCCAAGAACAATCTGTCCGGAGAGATCAGTGCCATCTCTGCATCACAGCTGAAGAATCTGAAGTACCTTGTGCTGTCTGAAAATCTCCTGGAGGGAACCATCCCTGAAGGCCTCTGCAATGGCGATGGCAATGGCAATGGCAACTCGAGCTTGGAGAACCTGTTCCTCGCCGGCAACGACCTCGGAGGCAGCATTGATGCCCTGCTGAGCTGCACCTCGCTGAAGTCCATCGACGTGTCGAACAACAGCCTCACCGGCGAGATACCGCCGGCGATCGACCGGCTGCCGGGCCTCGTCAACCTTGCGCTGCACAACAACAGCTTTGCCGGCGTCCTGCCGCCGCAGATTGGGAACTTGAGTAACCTGGAGGTGCTGTCTCTGTACCACAATGGCCTCACCGGCGGCATCCCGCCGGAGATCGGCCGGCTGCAGAGGCTGAAGCTGCTGTTCCTCTACGAGAACGAGATGACCGGAGCCATCCCGGATGAGATGACCAACTGCTCGAGCTTGGAGGAGGTCGACTTCTTCGGCAACCACTTCCATGGCCCGATCCCGGCGAGCATCGGCAACCTCAAGAACCTCGCCGTGCTCCAGCTCCGGCAGAATGATCTGACTGGCCCGATTCCGGCGAGCCTCGGCGAATGCAGGAGTCTGCAGGCGCTGGCGCTGGCGGACAACCGGCTCTCCGGCGAGCTGCCGGAGTCGTTCGGCCGCCTCGCCGAGCTCAGCGTCGTCACCCTGTACAACAACTCGCTGGAGGGCGCCTTGCCGGAGTCGATGTTCGAGCTCAAGAACCTGACGGTCATCAACTTCTCCCACAACCGGTTCACCGGCGCCGTCGTGCCGCTCCTCGGCTCCAGCTCCCTCACCGTGCTGGCCCTCACCAACAACAGCTTCTCCGGCGTCATCCCGGCGGCGGTCGCGCGGTCGACGGGCATGGTCCGGCTACAGCTCGCCGGCAACCGCCTCGCCGGCGCGATCCCGGCCGAGCTGGGTGACCTGACCGAGCTCAAGATACTTGACCTCTCGAACAACAACTTCTCCGGCGACATCCCGCCGGAGCTCTCCAACTGCTCGCGGCTCACCCATCTGAACCTTGACGGGAACAGCCTCACCGGCGCCGTACCGCCATGGCTCGGAGGCCTCCGGTCGCTCGGCGAGCTGGACCTCTCGTCGAACGCGCTCACCGGCGGCATTCCGGTGGAGCTCGGCGGCTGCTCCGGCCTGCTCAAGCTGTCCCTGAGCGGCAACCGTCTCTCCGGGAGCATTCCGCCGGAGATCGGGAAGCTGACATCACTCAACGTTCTGAACCTGCAGAAGAACGGCTTCACCGGCGTCATTCCGCCGGAGCTCCGGCGATGCAACAAGCTGTACGAGCTGCGGCTGTCGGAGAACTCGCTGGAGGGGCCGATCCCGGCGGAGCTCGGGCAGCTGCCGGAGCTGCAGGTGATACTGGACCTGAGCCGGAACAAGCTCTCCGGCGAGATCCCGGCGTCGCTCGGAGACCTCGTCAAGCTGGAGAGGCTCAACCTCTCCTCCAACCAGCTCCATGGCCAGATACCTCCCTCGCTGCTGCAGCTCACGAGCCTCCACCTTCTCAACCTGTCCGACAACCTCCTCTCCGGCGGCATCCCGGGCGCGCTCTCCGCGTTCCCGGCCGCGTCCTTCGCGGGCAACGGCGAGCTCTGCGGCGCGCCGCTGCCGTCGTGCGGGGCGCCGCGGCGGCTGCCGGGGGCGGAGGTGTCGGCCATCGTGGCGGCCATCGCCGTCGTGTCGGCCGCGGTGTGCGTCGCGCTGCTGTACATAATGCTCAGGATGTGGAGCAACTGGAGGGCCGTCGCCTCCGTGTCGAGCTCCGACGGCGAGGAGACGGCGTCCTCGGTGGCGGCGGCGCACGGCAAGTGGTGCGCCGGCGACGGCAAGTACTGGAAGGTCGGGTCGGTGTCGGTGGCGTCGTCCGCCGCCGAAGAGAAGTACAGCTCGGCGTCGTCGGAGACGACCAGCGTGCTGCACGGGAAGCCGGCGGAGGCGGCCGGTGGCGGCGCCGGCGCGGTGAAGCCGGCGAGCAAGTGCTGA</cdnaseq>

Protein Sequence

<aaseq>MSKKERGALFYTHICPLTHVPSGSQILWLGSSTEGNKEKCELVRPMHAAAAVLPVMGAWICNYRGSYWSAKISTSESMNRLRLLLCAHDEPPNLSYGVHSFMLTLSSPEFQHPLMVSLVLAMAGKLISSSIVLALLPLFCGILLAPSCEAATVDTTSATLLQVKSGFTDPNGVLSGWSPEADVCSWHGVTCLTGEGIVTGLNLSGYGLSGTISPAIAGLVSVESIDLSSNSLTGAIPPELGTMKSLKTLLLHSNLLTGAIPPELGGLKNLKLLRIGNNPLRGEIPPELGDCSELETIGMAYCQLIGAIPHQIGNLKQLQQLALDNNTLTGGLPEQLAGCANLRVLSVADNKLDGVIPSSIGGLSSLQSLNLANNQFSGVIPPEIGNLSGLTYLNLLGNRLTGGIPEELNRLSQLQVVDLSKNNLSGEISAISASQLKNLKYLVLSENLLEGTIPEGLCNGDGNGNGNSSLENLFLAGNDLGGSIDALLSCTSLKSIDVSNNSLTGEIPPAIDRLPGLVNLALHNNSFAGVLPPQIGNLSNLEVLSLYHNGLTGGIPPEIGRLQRLKLLFLYENEMTGAIPDEMTNCSSLEEVDFFGNHFHGPIPASIGNLKNLAVLQLRQNDLTGPIPASLGECRSLQALALADNRLSGELPESFGRLAELSVVTLYNNSLEGALPESMFELKNLTVINFSHNRFTGAVVPLLGSSSLTVLALTNNSFSGVIPAAVARSTGMVRLQLAGNRLAGAIPAELGDLTELKILDLSNNNFSGDIPPELSNCSRLTHLNLDGNSLTGAVPPWLGGLRSLGELDLSSNALTGGIPVELGGCSGLLKLSLSGNRLSGSIPPEIGKLTSLNVLNLQKNGFTGVIPPELRRCNKLYELRLSENSLEGPIPAELGQLPELQVILDLSRNKLSGEIPASLGDLVKLERLNLSSNQLHGQIPPSLLQLTSLHLLNLSDNLLSGGIPGALSAFPAASFAGNGELCGAPLPSCGAPRRLPGAEVSAIVAAIAVVSAAVCVALLYIMLRMWSNWRAVASVSSSDGEETASSVAAAHGKWCAGDGKYWKVGSVSVASSAAEEKYSSASSETTSVLHGKPAEAAGGGAGAVKPASKC</aaseq>

Gene Sequence

<dnaseqindica>1..92#588..697#1112..1149#1607..1705#1754..4747#ATGAGCAAGAAGGAAAGGGGCGCTTTATTCTACACCCACATTTGTCCTTTGACTCATGTCCCATCCGGATCTCAAATCCTGTGGTTAGGCAGGTTAGAAGCGTACAAGCAAGTAGCACAGTATTAGGCAGGCTTAAGTCAAACCCAGATCAATCAGGACCCAGTACTAAAATTGTTTGAATGTCAAAGAAAGTCAATCGTAGACCAATGATGCAACCATTGCACCAACAGCACATCACTGTCCTCATGTTACCGAAACGACGGGTAGTTGTGTAGGCTTTGAGTCACAACCAATCATCTGCTGGCCTTTCGACTAATATTTACTCAAATTTCAATCATGCGTTGCTAACTAGTGTGGTTTTACAGCTAAATGAGTAGATAATCTAGTTGGAAAAGGAGTTCTTTAGTTACAAATTCTGGGTACCACAATGTGGTCTGAACTCTGAAAATCTGAACCAGAAAGTAGTGTGTCGTTGTGCATCATGAGGATTTAGAAGCCAGTAGGCAATAGTAGATAACCGGATAGCCATATTGATGTCTCTATCTGGTTGGATGTTTCCTAAACGTGGGAATCTCTGCTATGTGCAGTTCAACTGAAGGAAACAAAGAAAAGTGCGAGCTGGTGCGTCCCATGCATGCTGCTGCTGCAGTTCTGCCTGTGATGGGGGCCTGGATATGCAACTATCGTGGTAGTTACTGTGAGTTCTGTTCTTTTTTTTTTCTCCGCCCCCTTCGCCTTTGTTTCGTGTGGTTTATTGATGCAATTCTGTTCCTGTCATTGTCACTCCCCTGCAAAAGTCACTTTCCCTCTACCTGATAATTGAAAACAATGCCACTATGTGTGTCTCGCTGGCTTGGTGATTAGTTAGTCCTTTTCTGTAGTTCTGCTAATGTGGTCTATTCAGATACAAATACCATATATCTATATACGAATTTACCTTCTGTTATGTGATCATAATCGTATTACTGTATGCTCTCTTGGTTGATTGCACATTCAATTTTCTGAATTTTCTTGTAGTGAGACTGTCTGCCACTGCCAGTACTTCCCATGGTGGATCGGTGCCAAATTAGGCTGACAAGGAGAAAATTTCATGCCGTGTACTTGTTTGCAGGGTCAGCAAAAATATCGACTTCGGAATCGATGAACAGGGTAAGCACGAATCTTATTAGTTTTCTGTCACTAAACCTGAGTTAGAAAACTATTAAGCCAAGGAATAAGGATGGAAGCGTCATGCTATTGTCCTCATGCCACCAAATCATGGGGAGTGGTTGAACTGTTTACGCACGTACACTCTGTAAAGTGGCAGTGTATCTTACTGATTCCCGGTGCCCTTTTTTCATCCTTGTCACCAGTTGCCATGCAGAAGAAGCTGAGCTAACAAGTCAAAGCAACAAGATTAGCCTTTAAAATACCTCATACTTAGCCCTGCATTATACAAGTCTAGGCTGATTATTGTAAACTCCATGTCTGCAAGAGATAGTGTACAGTGCTATACCTTCTCCTTTGGCTTTGTGTTGCATTTTCAGTACCAAGAATCCATCACATTACCCTGAGTGATATGCACAGAGCAGGTAGTGTTTGACAACTTTGTTTCTGCTTTTTGCAGCTTAGGCTCCTACTTTGTGCACATGATGAGCCTCCAAACCTCAGCTATGGAGTTCATAGTTTCATGCTCACCTTGTCATCTCCAGAGTTCCAGCATCCTGTAAGTTCCAATTCATATGCATCTTAGAACACTGCTTCAGTTGCTCAGTTGATGGTATCATTGGTCTTAGCAATGGCTGGCAAGCTGATCAGCTCCTCCATTGTTCTTGCTCTTCTACCTCTGTTCTGTGGCATCCTGCTTGCACCATCATGTGAAGCAGCCACAGTAGACACAACATCTGCCACTCTCCTGCAAGTGAAGTCAGGTTTCACTGACCCTAATGGCGTCCTCTCCGGCTGGTCGCCGGAGGCCGACGTGTGCTCATGGCACGGCGTGACGTGCCTGACAGGGGAGGGCATTGTCACCGGCCTCAACCTGTCGGGGTACGGCCTGTCCGGCACGATATCGCCGGCGATAGCCGGCCTTGTATCCGTCGAGTCCATTGATCTGTCGTCAAATTCCCTCACCGGCGCAATCCCGCCGGAGCTCGGGACGATGAAGAGCCTGAAGACGCTGCTGCTTCACTCCAACCTCCTCACCGGCGCCATCCCACCGGAGCTCGGCGGCCTCAAGAACCTGAAGTTACTGAGGATCGGCAACAACCCGCTGCGCGGCGAGATACCACCGGAGCTCGGCGACTGCTCGGAGCTGGAGACGATCGGCATGGCCTACTGCCAGCTGATCGGCGCCATCCCCCACCAGATTGGCAACCTGAAGCAGCTTCAGCAGCTGGCCCTGGACAACAACACCCTCACCGGCGGCCTCCCGGAGCAGCTCGCCGGCTGTGCAAACCTGCGTGTCCTCTCGGTGGCTGACAACAAGCTGGATGGCGTCATACCTTCCTCCATTGGCGGCCTGAGCTCTCTCCAGTCTCTGAACCTTGCAAACAACCAGTTCTCCGGCGTGATTCCGCCGGAGATCGGTAACCTCTCCGGCTTGACATACCTGAACTTACTCGGCAACCGCCTCACCGGCGGCATCCCGGAAGAACTGAACCGGCTGAGCCAGCTGCAGGTTGTGGATTTGTCCAAGAACAATCTGTCCGGAGAGATCAGTGCCATCTCTGCATCACAGCTGAAGAATCTGAAGTACCTTGTGCTGTCTGAAAATCTCCTGGAGGGAACCATCCCTGAAGGCCTCTGCAATGGCGATGGCAATGGCAATGGCAACTCGAGCTTGGAGAACCTGTTCCTCGCCGGCAACGACCTCGGAGGCAGCATTGATGCCCTGCTGAGCTGCACCTCGCTGAAGTCCATCGACGTGTCGAACAACAGCCTCACCGGCGAGATACCGCCGGCGATCGACCGGCTGCCGGGCCTCGTCAACCTTGCGCTGCACAACAACAGCTTTGCCGGCGTCCTGCCGCCGCAGATTGGGAACTTGAGTAACCTGGAGGTGCTGTCTCTGTACCACAATGGCCTCACCGGCGGCATCCCGCCGGAGATCGGCCGGCTGCAGAGGCTGAAGCTGCTGTTCCTCTACGAGAACGAGATGACCGGAGCCATCCCGGATGAGATGACCAACTGCTCGAGCTTGGAGGAGGTCGACTTCTTCGGCAACCACTTCCATGGCCCGATCCCGGCGAGCATCGGCAACCTCAAGAACCTCGCCGTGCTCCAGCTCCGGCAGAATGATCTGACTGGCCCGATTCCGGCGAGCCTCGGCGAATGCAGGAGTCTGCAGGCGCTGGCGCTGGCGGACAACCGGCTCTCCGGCGAGCTGCCGGAGTCGTTCGGCCGCCTCGCCGAGCTCAGCGTCGTCACCCTGTACAACAACTCGCTGGAGGGCGCCTTGCCGGAGTCGATGTTCGAGCTCAAGAACCTGACGGTCATCAACTTCTCCCACAACCGGTTCACCGGCGCCGTCGTGCCGCTCCTCGGCTCCAGCTCCCTCACCGTGCTGGCCCTCACCAACAACAGCTTCTCCGGCGTCATCCCGGCGGCGGTCGCGCGGTCGACGGGCATGGTCCGGCTACAGCTCGCCGGCAACCGCCTCGCCGGCGCGATCCCGGCCGAGCTGGGTGACCTGACCGAGCTCAAGATACTTGACCTCTCGAACAACAACTTCTCCGGCGACATCCCGCCGGAGCTCTCCAACTGCTCGCGGCTCACCCATCTGAACCTTGACGGGAACAGCCTCACCGGCGCCGTACCGCCATGGCTCGGAGGCCTCCGGTCGCTCGGCGAGCTGGACCTCTCGTCGAACGCGCTCACCGGCGGCATTCCGGTGGAGCTCGGCGGCTGCTCCGGCCTGCTCAAGCTGTCCCTGAGCGGCAACCGTCTCTCCGGGAGCATTCCGCCGGAGATCGGGAAGCTGACATCACTCAACGTTCTGAACCTGCAGAAGAACGGCTTCACCGGCGTCATTCCGCCGGAGCTCCGGCGATGCAACAAGCTGTACGAGCTGCGGCTGTCGGAGAACTCGCTGGAGGGGCCGATCCCGGCGGAGCTCGGGCAGCTGCCGGAGCTGCAGGTGATACTGGACCTGAGCCGGAACAAGCTCTCCGGCGAGATCCCGGCGTCGCTCGGAGACCTCGTCAAGCTGGAGAGGCTCAACCTCTCCTCCAACCAGCTCCATGGCCAGATACCTCCCTCGCTGCTGCAGCTCACGAGCCTCCACCTTCTCAACCTGTCCGACAACCTCCTCTCCGGCGGCATCCCGGGCGCGCTCTCCGCGTTCCCGGCCGCGTCCTTCGCGGGCAACGGCGAGCTCTGCGGCGCGCCGCTGCCGTCGTGCGGGGCGCCGCGGCGGCTGCCGGGGGCGGAGGTGTCGGCCATCGTGGCGGCCATCGCCGTCGTGTCGGCCGCGGTGTGCGTCGCGCTGCTGTACATAATGCTCAGGATGTGGAGCAACTGGAGGGCCGTCGCCTCCGTGTCGAGCTCCGACGGCGAGGAGACGGCGTCCTCGGTGGCGGCGGCGCACGGCAAGTGGTGCGCCGGCGACGGCAAGTACTGGAAGGTCGGGTCGGTGTCGGTGGCGTCGTCCGCCGCCGAAGAGAAGTACAGCTCGGCGTCGTCGGAGACGACCAGCGTGCTGCACGGGAAGCCGGCGGAGGCGGCCGGTGGCGGCGCCGGCGCGGTGAAGCCGGCGAGCAAGTGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019255